RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HELZ2Q9BYK8 2649 aaKnown RBP1.09□□□□□ -2.24
CLK1-214ENST00000496205 A0A0G2JMZ2 1700 aa1.09□□□□□ -2.24
CLK1-214ENST00000496205 BPTFQ12830 3046 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 PLXNB2O15031 1838 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 LAMA5O15230 3695 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 D6R8Y8 96 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 DEFB121Q5J5C9 76 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 MUSTN1Q8IVN3 82 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 DEFB107AQ8IZN7 70 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 CFAP54Q96N23 3096 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 F5P12259 2224 aa1.08□□□□□ -2.24
CLK1-214ENST00000496205 ZFHX3Q15911 3703 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 TRBV6-1A0A0K0K1D8 114 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 C10orf113Q5VZT2 155 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 KMT2BQ9UMN6 2715 aaPredicted RBP1.07□□□□□ -2.24
CLK1-214ENST00000496205 SPEGQ15772 3267 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 DCHS1Q96JQ0 3298 aa1.07□□□□□ -2.24
CLK1-214ENST00000496205 SPENQ96T58 3664 aaKnown RBP1.07□□□□□ -2.24
CLK1-214ENST00000496205 ASPMQ8IZT6 3477 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 H0Y9P7 68 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 IFI27P40305 119 aaPredicted RBP1.06□□□□□ -2.24
CLK1-214ENST00000496205 HAMPP81172 84 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 PLAC8Q9NZF1 115 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 UBE2D4Q9Y2X8 147 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 BDP1A6H8Y1 2624 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 CFAP47Q6ZTR5 3102 aa1.06□□□□□ -2.24
CLK1-214ENST00000496205 SPINK7P58062 85 aa1.05□□□□□ -2.24
CLK1-214ENST00000496205 LOC400499M0QZD8 3231 aa1.05□□□□□ -2.24
CLK1-214ENST00000496205 DMXL1Q9Y485 3027 aa1.05□□□□□ -2.24
CLK1-214ENST00000496205 FREM2Q5SZK8 3169 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 SMG1Q96Q15 3661 aaKnown RBP1.04□□□□□ -2.24
CLK1-214ENST00000496205 TRBV7-4A0A0J9YYF1 115 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 LINC01549A6NIU2 74 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 K7EMI3 77 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 IFI6P09912 130 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 ATXN8Q156A1 80 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 ZNF292O60281 2723 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 KNTC1P50748 2209 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 COL6A6A6NMZ7 2263 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 CACNA1EQ15878 2313 aa1.04□□□□□ -2.24
CLK1-214ENST00000496205 DNAJC13O75165 2243 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 MYO7AQ13402 2215 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 ROS1P08922 2347 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 ZDBF2Q9HCK1 2354 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 A0A0D9SFI3 127 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 ATP5EP2Q5VTU8 51 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 NCBP2-AS2Q69YL0 99 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 FRYQ5TBA9 3013 aa1.03□□□□□ -2.24
CLK1-214ENST00000496205 TTC28Q96AY4 2481 aa1.03□□□□□ -2.25
CLK1-214ENST00000496205 PRRC2CQ9Y520 2896 aaKnown RBP1.02□□□□□ -2.25
CLK1-214ENST00000496205 TRAV21A0A0B4J279 112 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 A0A0D9SG42 100 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 A0A1B0GUT8 65 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 SNRPGP15A8MWD9 76 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 CACNA1HO95180 2353 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 FCER1GP30273 86 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 NREPQ16612 68 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 VPS13CQ709C8 3753 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 WFDC9Q8NEX5 89 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 CELSR3Q9NYQ7 3312 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 DMXL2Q8TDJ6 3036 aa1.02□□□□□ -2.25
CLK1-214ENST00000496205 ATMQ13315 3056 aa1.01□□□□□ -2.25
CLK1-214ENST00000496205 HMGA1P17096 107 aaKnown RBP1.01□□□□□ -2.25
CLK1-214ENST00000496205 CNFNQ9BYD5 112 aa1.01□□□□□ -2.25
CLK1-214ENST00000496205 CACNA1CQ13936 2221 aa1.01□□□□□ -2.25
CLK1-214ENST00000496205 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
CLK1-214ENST00000496205 KNL1Q8NG31 2342 aa1□□□□□ -2.25
CLK1-214ENST00000496205 ZZEF1O43149 2961 aa1□□□□□ -2.25
CLK1-214ENST00000496205 PRH1P02810 166 aa1□□□□□ -2.25
CLK1-214ENST00000496205 SSBP3-AS1Q7Z2R9 100 aa1□□□□□ -2.25
CLK1-214ENST00000496205 PIEZO1Q92508 2521 aa1□□□□□ -2.25
CLK1-214ENST00000496205 BOD1L1Q8NFC6 3051 aa1□□□□□ -2.25
CLK1-214ENST00000496205 GOLGA4Q13439 2230 aaKnown RBP1□□□□□ -2.25
CLK1-214ENST00000496205 AKAP9Q99996 3911 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 DSPP15924 2871 aaKnown RBP0.99□□□□□ -2.25
CLK1-214ENST00000496205 MGAQ8IWI9 3026 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 DEFB112Q30KQ8 113 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 ENHOQ6UWT2 76 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 ADGRG4Q8IZF6 3080 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 SPTBN4Q9H254 2564 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 NBEAQ8NFP9 2946 aa0.99□□□□□ -2.25
CLK1-214ENST00000496205 CACNA1AO00555 2505 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 ZNF469Q96JG9 3925 aaPredicted RBP0.98□□□□□ -2.25
CLK1-214ENST00000496205 RIF1Q5UIP0 2472 aaKnown RBP0.98□□□□□ -2.25
CLK1-214ENST00000496205 CNOT1A5YKK6 2376 aaKnown RBP0.98□□□□□ -2.25
CLK1-214ENST00000496205 FAM186AA6NE01 2351 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 KALRNO60229 2985 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 A0A1B0GU69 56 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 NDUFB1O75438 58 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 COX6A2Q02221 97 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 TOMM5Q8N4H5 51 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 GAFA1Q96PS6 74 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 NAV3Q8IVL0 2385 aa0.98□□□□□ -2.25
CLK1-214ENST00000496205 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
CLK1-214ENST00000496205 LINC00959A0A1B0GUT2 108 aa0.97□□□□□ -2.25
CLK1-214ENST00000496205 RELNP78509 3460 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms