RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
RFC4-214ENST00000494047 Q8N3U1 123 aa7.64□□□□□ -1.19
RFC4-214ENST00000494047 NKAPP1Q8N9T2 125 aa7.64□□□□□ -1.19
RFC4-214ENST00000494047 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
RFC4-214ENST00000494047 A0A087WVE0 104 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 ERC2-IT1O76042 136 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 DNAH10OSP0CZ25 163 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 KRTAP26-1Q6PEX3 210 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 Q8NDZ9 215 aa7.63□□□□□ -1.19
RFC4-214ENST00000494047 PRYO14603 147 aa7.62□□□□□ -1.19
RFC4-214ENST00000494047 C15orf56Q8N910 161 aa7.62□□□□□ -1.19
RFC4-214ENST00000494047 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
RFC4-214ENST00000494047 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 Q6ZRU5 148 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 WWC2-AS2Q96NR7 200 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 XAGE1AQ9HD64 81 aa7.61□□□□□ -1.19
RFC4-214ENST00000494047 HAMPP81172 84 aa7.6□□□□□ -1.19
RFC4-214ENST00000494047 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
RFC4-214ENST00000494047 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
RFC4-214ENST00000494047 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
RFC4-214ENST00000494047 IGKV2D-24A0A075B6R9 120 aa7.59□□□□□ -1.2
RFC4-214ENST00000494047 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.2
RFC4-214ENST00000494047 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.2
RFC4-214ENST00000494047 Q6ZTC4 211 aa7.59□□□□□ -1.2
RFC4-214ENST00000494047 PKIGQ9Y2B9 76 aa7.59□□□□□ -1.2
RFC4-214ENST00000494047 FUSP35637 526 aaKnown RBP eCLIP7.58□□□□□ -1.2
RFC4-214ENST00000494047 FAM19A1Q7Z5A9 133 aa7.58□□□□□ -1.2
RFC4-214ENST00000494047 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
RFC4-214ENST00000494047 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
RFC4-214ENST00000494047 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
RFC4-214ENST00000494047 ESRGQ1W209 222 aa7.57□□□□□ -1.2
RFC4-214ENST00000494047 DPH3Q96FX2 82 aa7.57□□□□□ -1.2
RFC4-214ENST00000494047 STAB2Q8WWQ8 2551 aa7.56□□□□□ -1.2
RFC4-214ENST00000494047 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
RFC4-214ENST00000494047 FAM236DA0A1B0GTK5 79 aa7.56□□□□□ -1.2
RFC4-214ENST00000494047 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
RFC4-214ENST00000494047 NREPQ16612 68 aa7.55□□□□□ -1.2
RFC4-214ENST00000494047 Q6ZRP5 223 aa7.55□□□□□ -1.2
RFC4-214ENST00000494047 C3orf84H3BNL1 204 aa7.54□□□□□ -1.2
RFC4-214ENST00000494047 Q6ZRX8 168 aa7.54□□□□□ -1.2
RFC4-214ENST00000494047 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
RFC4-214ENST00000494047 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
RFC4-214ENST00000494047 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
RFC4-214ENST00000494047 ETDCA0A1B0GVM5 59 aa7.53□□□□□ -1.2
RFC4-214ENST00000494047 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
RFC4-214ENST00000494047 SPRR1AP35321 89 aa7.52□□□□□ -1.21
RFC4-214ENST00000494047 BPY2O14599 106 aa7.51□□□□□ -1.21
RFC4-214ENST00000494047 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
RFC4-214ENST00000494047 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
RFC4-214ENST00000494047 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
RFC4-214ENST00000494047 C7orf33Q8WU49 177 aa7.5□□□□□ -1.21
RFC4-214ENST00000494047 IGLV1-50A0A075B6I6 118 aa7.49□□□□□ -1.21
RFC4-214ENST00000494047 H7BZZ5 65 aa7.48□□□□□ -1.21
RFC4-214ENST00000494047 F8WEM9 126 aa7.47□□□□□ -1.21
RFC4-214ENST00000494047 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
RFC4-214ENST00000494047 RETNQ9HD89 108 aa7.47□□□□□ -1.21
RFC4-214ENST00000494047 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.21
RFC4-214ENST00000494047 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.21
RFC4-214ENST00000494047 Q8NBF4 154 aa7.46□□□□□ -1.21
RFC4-214ENST00000494047 NBEAL2Q6ZNJ1 2754 aa7.46□□□□□ -1.22
RFC4-214ENST00000494047 M0R2N4 97 aa7.46□□□□□ -1.22
RFC4-214ENST00000494047 TNP2Q05952 138 aa7.46□□□□□ -1.22
RFC4-214ENST00000494047 Q8N377 158 aa7.46□□□□□ -1.22
RFC4-214ENST00000494047 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
RFC4-214ENST00000494047 DNAH7Q8WXX0 4024 aa7.45□□□□□ -1.22
RFC4-214ENST00000494047 EPM2AB3EWF7 344 aa7.45□□□□□ -1.22
RFC4-214ENST00000494047 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
RFC4-214ENST00000494047 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
RFC4-214ENST00000494047 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
RFC4-214ENST00000494047 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
RFC4-214ENST00000494047 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
RFC4-214ENST00000494047 CYSTM1Q9H1C7 97 aa7.44□□□□□ -1.22
RFC4-214ENST00000494047 REG3GQ6UW15 175 aa7.43□□□□□ -1.22
RFC4-214ENST00000494047 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
RFC4-214ENST00000494047 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
RFC4-214ENST00000494047 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
RFC4-214ENST00000494047 OCR1Q9BZK8 76 aa7.41□□□□□ -1.22
RFC4-214ENST00000494047 KMT2CQ8NEZ4 4911 aaKnown RBP7.4□□□□□ -1.23
RFC4-214ENST00000494047 IGLV8-61A0A075B6I0 122 aa7.39□□□□□ -1.23
RFC4-214ENST00000494047 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
RFC4-214ENST00000494047 UBE2BP63146 152 aa7.39□□□□□ -1.23
RFC4-214ENST00000494047 H0Y9J4 135 aa7.38□□□□□ -1.23
RFC4-214ENST00000494047 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
RFC4-214ENST00000494047 Q9BRP9 147 aa7.38□□□□□ -1.23
RFC4-214ENST00000494047 SCXQ7RTU7 201 aa7.37□□□□□ -1.23
RFC4-214ENST00000494047 LINC00474Q9P2X8 69 aa7.37□□□□□ -1.23
RFC4-214ENST00000494047 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
RFC4-214ENST00000494047 LCE6AA0A183 80 aa7.36□□□□□ -1.23
RFC4-214ENST00000494047 NDUFB1O75438 58 aa7.36□□□□□ -1.23
RFC4-214ENST00000494047 NUPR2A6NF83 97 aa7.35□□□□□ -1.23
RFC4-214ENST00000494047 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
RFC4-214ENST00000494047 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
RFC4-214ENST00000494047 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
RFC4-214ENST00000494047 STARD9Q9P2P6 4700 aa7.34□□□□□ -1.24
RFC4-214ENST00000494047 PSCAO43653 123 aa7.33□□□□□ -1.24
RFC4-214ENST00000494047 H3BPC8 53 aa7.33□□□□□ -1.24
RFC4-214ENST00000494047 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms