RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CLPSL1A2RUU4 121 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 IL5P05113 134 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 SMIM6P0DI80 62 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 CD52P31358 61 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 EDDM3BP56851 147 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 SCIMPQ6UWF3 145 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 SPTSSAQ969W0 71 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 Q9Y3F1 56 aa0.06□□□□□ -2.4
ITGB1-216ENST00000493758 DEFB108AA8MXU0 73 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 C10orf142B7Z368 130 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 NPFFO15130 113 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 SNCGO76070 127 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 GUCA1AP43080 201 aaPredicted RBP0.05□□□□□ -2.4
ITGB1-216ENST00000493758 COPZ1P61923 177 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 UBE2G1P62253 170 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 INSL4Q14641 139 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 ALX1Q15699 326 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 SMIM21Q3B7S5 101 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 KCNRGQ8N5I3 272 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 C10orf82Q8WW14 230 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 ANP32BQ92688 251 aaKnown RBP0.05□□□□□ -2.4
ITGB1-216ENST00000493758 TPT1P8Q9HAU6 139 aa0.05□□□□□ -2.4
ITGB1-216ENST00000493758 FAM92AA1XBS5 289 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 APOC4-APOC2K7ER74 178 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 IFITM1P13164 125 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 CBLN1P23435 193 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 UBE2D1P51668 147 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 UBE2DNLQ8IWF7 75 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 SPTSSBQ8NFR3 76 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 LINC01600Q96MT4 127 aa0.04□□□□□ -2.4
ITGB1-216ENST00000493758 KTN1Q86UP2 1357 aaKnown RBP0.04□□□□□ -2.4
ITGB1-216ENST00000493758 PITX3O75364 302 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 NDUFB6O95139 128 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 MT1BP07438 61 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 RPS25P62851 125 aaKnown RBP0.03□□□□□ -2.4
ITGB1-216ENST00000493758 SMCO1Q147U7 214 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 ZNF818PQ6ZRF7 136 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 PFDN5Q99471 154 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 WFDC6Q9BQY6 131 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 APLNQ9ULZ1 77 aa0.03□□□□□ -2.4
ITGB1-216ENST00000493758 TRAV1-2A0A0B4J238 106 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 TRBV10-3A0A0K0K1G6 114 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 ZNF815PA8K554 130 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 S100A7L2Q5SY68 101 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 SSBP3-AS1Q7Z2R9 100 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 BAGE3Q86Y29 109 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 SEC11CQ9BY50 192 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 TMEM191AQ9H0A3 160 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 CCDC167Q9P0B6 97 aa0.02□□□□□ -2.41
ITGB1-216ENST00000493758 PIGBOS1A0A0B4J2F0 54 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 A0A0D9SFI3 127 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 LOC105371267A0A1B0GV96 52 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 SPINK8P0C7L1 97 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 COPS9Q8WXC6 57 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 PAIP2BQ9ULR5 123 aaKnown RBP0.01□□□□□ -2.41
ITGB1-216ENST00000493758 LINC00312Q9Y6C7 94 aa0.01□□□□□ -2.41
ITGB1-216ENST00000493758 CFDP00746 253 aaPredicted RBP0□□□□□ -2.41
ITGB1-216ENST00000493758 CCL8P80075 99 aa0□□□□□ -2.41
ITGB1-216ENST00000493758 DEFB133Q30KQ1 61 aa0□□□□□ -2.41
ITGB1-216ENST00000493758 KRTAP6-2Q3LI66 62 aa0□□□□□ -2.41
ITGB1-216ENST00000493758 Q5VV11 94 aa0□□□□□ -2.41
ITGB1-216ENST00000493758 PRO0255Q9UI72 69 aa0□□□□□ -2.41
ITGB1-216ENST00000493758 G3V318 75 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 ARPC4P59998 168 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 CFAP126Q5VTH2 177 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 AQP10Q96PS8 301 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 SDF2Q99470 211 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 PDCD10Q9BUL8 212 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 CNFNQ9BYD5 112 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 CYP4F30PQ9H0H9 118 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 NPVFQ9HCQ7 196 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 R4GMQ9 66 aa-0.01□□□□□ -2.41
ITGB1-216ENST00000493758 SIX6O95475 246 aa-0.02□□□□□ -2.41
ITGB1-216ENST00000493758 MT1MQ8N339 61 aa-0.02□□□□□ -2.41
ITGB1-216ENST00000493758 DPH3Q96FX2 82 aa-0.02□□□□□ -2.41
ITGB1-216ENST00000493758 SCN3BQ9NY72 215 aa-0.02□□□□□ -2.41
ITGB1-216ENST00000493758 ROCK2O75116 1388 aaKnown RBP-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 TRAV13-2A0A0B4J235 113 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 FAM25AB3EWG3 89 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 FAM25CB3EWG5 89 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 FAM25GB3EWG6 89 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 HCG22E2RYF7 251 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 PPP1R17O96001 155 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 HIST1H1DP16402 221 aaKnown RBP-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 S100A3P33764 101 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 CCL18P55774 89 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 C10orf128Q5T292 105 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 C12orf73Q69YU5 71 aa-0.03□□□□□ -2.41
ITGB1-216ENST00000493758 TRAV22A0A0B4J277 110 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 CTXND1A0A1B0GTU2 59 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 M0R3E3 92 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 DEFB112Q30KQ8 113 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 CCDC58Q4VC31 144 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 SMIM4Q8WVI0 70 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 AGPAT4-IT1Q9H0P7 198 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 SPCS1Q9Y6A9 102 aa-0.04□□□□□ -2.42
ITGB1-216ENST00000493758 SPTY2D1-AS1A0A0U1RR47 76 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 MT1EP04732 61 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 SELENOWP63302 87 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms