RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 KRTAP4-5Q9BYR2 181 aa9.68□□□□□ -0.86
HPS4-216ENST00000493455 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
HPS4-216ENST00000493455 FAT1Q14517 4588 aa9.68□□□□□ -0.86
HPS4-216ENST00000493455 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
HPS4-216ENST00000493455 H7C2G1 150 aa9.67□□□□□ -0.86
HPS4-216ENST00000493455 HINT1P49773 126 aaPredicted RBP9.67□□□□□ -0.86
HPS4-216ENST00000493455 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
HPS4-216ENST00000493455 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
HPS4-216ENST00000493455 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
HPS4-216ENST00000493455 CFC1P0CG37 223 aa9.66□□□□□ -0.86
HPS4-216ENST00000493455 ZNF73O43830 326 aaPredicted RBP9.65□□□□□ -0.86
HPS4-216ENST00000493455 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
HPS4-216ENST00000493455 K7ERJ3 54 aa9.64□□□□□ -0.87
HPS4-216ENST00000493455 Q1RN00 199 aa9.64□□□□□ -0.87
HPS4-216ENST00000493455 DIRC1Q969H9 104 aa9.64□□□□□ -0.87
HPS4-216ENST00000493455 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
HPS4-216ENST00000493455 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
HPS4-216ENST00000493455 C6orf99Q4VX62 202 aa9.63□□□□□ -0.87
HPS4-216ENST00000493455 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
HPS4-216ENST00000493455 M0R143 59 aa9.62□□□□□ -0.87
HPS4-216ENST00000493455 BATFQ16520 125 aa9.62□□□□□ -0.87
HPS4-216ENST00000493455 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
HPS4-216ENST00000493455 HIGD2AQ9BW72 106 aa9.62□□□□□ -0.87
HPS4-216ENST00000493455 SPRR1AP35321 89 aa9.61□□□□□ -0.87
HPS4-216ENST00000493455 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
HPS4-216ENST00000493455 ZNF861PO60384 105 aa9.6□□□□□ -0.87
HPS4-216ENST00000493455 INAFM2P0DMQ5 153 aa9.6□□□□□ -0.87
HPS4-216ENST00000493455 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
HPS4-216ENST00000493455 PCP4L1A6NKN8 68 aa9.59□□□□□ -0.87
HPS4-216ENST00000493455 B5MCH6 92 aa9.59□□□□□ -0.87
HPS4-216ENST00000493455 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
HPS4-216ENST00000493455 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
HPS4-216ENST00000493455 COX7BP24311 80 aa9.58□□□□□ -0.88
HPS4-216ENST00000493455 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
HPS4-216ENST00000493455 Q6ZRX8 168 aa9.57□□□□□ -0.88
HPS4-216ENST00000493455 KRTAP13-1Q8IUC0 172 aa9.57□□□□□ -0.88
HPS4-216ENST00000493455 H0Y9J4 135 aa9.56□□□□□ -0.88
HPS4-216ENST00000493455 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
HPS4-216ENST00000493455 VAMP3Q15836 100 aa9.54□□□□□ -0.88
HPS4-216ENST00000493455 SMCR5Q8TEV8 140 aa9.54□□□□□ -0.88
HPS4-216ENST00000493455 Q9BRP9 147 aa9.54□□□□□ -0.88
HPS4-216ENST00000493455 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
HPS4-216ENST00000493455 PSMB2P49721 201 aa9.53□□□□□ -0.88
HPS4-216ENST00000493455 TSPAN13O95857 204 aa9.52□□□□□ -0.89
HPS4-216ENST00000493455 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
HPS4-216ENST00000493455 PKHD1L1Q86WI1 4243 aa9.51□□□□□ -0.89
HPS4-216ENST00000493455 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
HPS4-216ENST00000493455 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
HPS4-216ENST00000493455 TRIAP1O43715 76 aa9.49□□□□□ -0.89
HPS4-216ENST00000493455 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
HPS4-216ENST00000493455 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
HPS4-216ENST00000493455 FLG2Q5D862 2391 aaPredicted RBP9.48□□□□□ -0.89
HPS4-216ENST00000493455 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
HPS4-216ENST00000493455 SLC25A20O43772 301 aa9.47□□□□□ -0.89
HPS4-216ENST00000493455 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
HPS4-216ENST00000493455 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.9
HPS4-216ENST00000493455 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.9
HPS4-216ENST00000493455 SCGB1C2P0DMR2 95 aa9.45□□□□□ -0.9
HPS4-216ENST00000493455 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
HPS4-216ENST00000493455 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
HPS4-216ENST00000493455 SNHG12Q9BXW3 62 aa9.45□□□□□ -0.9
HPS4-216ENST00000493455 COX6CP09669 75 aa9.44□□□□□ -0.9
HPS4-216ENST00000493455 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
HPS4-216ENST00000493455 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
HPS4-216ENST00000493455 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
HPS4-216ENST00000493455 H0YGX0 51 aa9.43□□□□□ -0.9
HPS4-216ENST00000493455 KRTAP1-4P0C5Y4 121 aa9.43□□□□□ -0.9
HPS4-216ENST00000493455 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
HPS4-216ENST00000493455 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
HPS4-216ENST00000493455 H3BUT2 72 aa9.39□□□□□ -0.91
HPS4-216ENST00000493455 SNCGO76070 127 aa9.39□□□□□ -0.91
HPS4-216ENST00000493455 Q6ZQY7 126 aa9.39□□□□□ -0.91
HPS4-216ENST00000493455 A0A087X002 238 aa9.37□□□□□ -0.91
HPS4-216ENST00000493455 J3QL48 77 aa9.37□□□□□ -0.91
HPS4-216ENST00000493455 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
HPS4-216ENST00000493455 CRYGAP11844 174 aa9.37□□□□□ -0.91
HPS4-216ENST00000493455 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
HPS4-216ENST00000493455 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
HPS4-216ENST00000493455 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
HPS4-216ENST00000493455 OXTP01178 125 aa9.36□□□□□ -0.91
HPS4-216ENST00000493455 C9orf118A6NHY6 69 aa9.35□□□□□ -0.91
HPS4-216ENST00000493455 DNAL4O96015 105 aa9.35□□□□□ -0.91
HPS4-216ENST00000493455 COL5A1-AS1Q5SY13 56 aa9.35□□□□□ -0.91
HPS4-216ENST00000493455 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
HPS4-216ENST00000493455 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
HPS4-216ENST00000493455 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
HPS4-216ENST00000493455 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
HPS4-216ENST00000493455 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
HPS4-216ENST00000493455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
HPS4-216ENST00000493455 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
HPS4-216ENST00000493455 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
HPS4-216ENST00000493455 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
HPS4-216ENST00000493455 LINC01547P58512 204 aaPredicted RBP9.32□□□□□ -0.92
HPS4-216ENST00000493455 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
HPS4-216ENST00000493455 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
HPS4-216ENST00000493455 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
HPS4-216ENST00000493455 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
HPS4-216ENST00000493455 A0A1B0GX51 115 aa9.31□□□□□ -0.92
HPS4-216ENST00000493455 TCL1BO95988 128 aa9.31□□□□□ -0.92
HPS4-216ENST00000493455 MOBPQ13875 183 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms