RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 COL5A1-AS1Q5SY13 56 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 BOD1L2Q8IYS8 172 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
SNRNP200-207ENST00000493271 BATFQ16520 125 aa6.24□□□□□ -1.41
SNRNP200-207ENST00000493271 SFTA2Q6UW10 78 aa6.24□□□□□ -1.41
SNRNP200-207ENST00000493271 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
SNRNP200-207ENST00000493271 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 SPINK1P00995 79 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 PFN2P35080 140 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 HIGD2AQ9BW72 106 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
SNRNP200-207ENST00000493271 HINT1P49773 126 aaPredicted RBP6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 HSD52Q0P140 79 aa6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 HIGD1BQ9P298 99 aa6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
SNRNP200-207ENST00000493271 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
SNRNP200-207ENST00000493271 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
SNRNP200-207ENST00000493271 E9PLD3 99 aa6.21□□□□□ -1.42
SNRNP200-207ENST00000493271 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 A0A1B0GV90 55 aa6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 BVES-AS1Q5T3Y7 98 aa6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 PCP2Q8IVA1 136 aa6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 DAND5Q8N907 189 aa6.2□□□□□ -1.42
SNRNP200-207ENST00000493271 Q8NBF4 154 aa6.19□□□□□ -1.42
SNRNP200-207ENST00000493271 A6NDN8 102 aa6.18□□□□□ -1.42
SNRNP200-207ENST00000493271 TAL2Q16559 108 aa6.18□□□□□ -1.42
SNRNP200-207ENST00000493271 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
SNRNP200-207ENST00000493271 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
SNRNP200-207ENST00000493271 ZNF815PA8K554 130 aa6.16□□□□□ -1.42
SNRNP200-207ENST00000493271 PRYO14603 147 aa6.16□□□□□ -1.42
SNRNP200-207ENST00000493271 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
SNRNP200-207ENST00000493271 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
SNRNP200-207ENST00000493271 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
SNRNP200-207ENST00000493271 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
SNRNP200-207ENST00000493271 LEPROTO15243 131 aa6.15□□□□□ -1.42
SNRNP200-207ENST00000493271 XP32Q5T750 250 aa6.15□□□□□ -1.42
SNRNP200-207ENST00000493271 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.42
SNRNP200-207ENST00000493271 J3QQQ9 107 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 SLC25A20O43772 301 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 CFC1BP0CG36 223 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 SPRR1AP35321 89 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 LINC00483Q53H64 154 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 Q8NDZ9 215 aa6.14□□□□□ -1.43
SNRNP200-207ENST00000493271 Q8N377 158 aa6.13□□□□□ -1.43
SNRNP200-207ENST00000493271 ZNF625Q96I27 306 aaPredicted RBP6.13□□□□□ -1.43
SNRNP200-207ENST00000493271 HIST1H4GQ99525 98 aa6.13□□□□□ -1.43
SNRNP200-207ENST00000493271 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
SNRNP200-207ENST00000493271 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 ETDCA0A1B0GVM5 59 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 A6NJY4 79 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 LINC00158P58513 81 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 CEND1Q8N111 149 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
SNRNP200-207ENST00000493271 TAX1BP3O14907 124 aa6.11□□□□□ -1.43
SNRNP200-207ENST00000493271 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
SNRNP200-207ENST00000493271 FXYD2P54710 66 aa6.1□□□□□ -1.43
SNRNP200-207ENST00000493271 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
SNRNP200-207ENST00000493271 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
SNRNP200-207ENST00000493271 MOBPQ13875 183 aa6.09□□□□□ -1.43
SNRNP200-207ENST00000493271 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
SNRNP200-207ENST00000493271 C9orf118A6NHY6 69 aa6.08□□□□□ -1.44
SNRNP200-207ENST00000493271 NHP2Q9NX24 153 aaKnown RBP6.08□□□□□ -1.44
SNRNP200-207ENST00000493271 IGLV9-49A0A0B4J1Y8 123 aa6.07□□□□□ -1.44
SNRNP200-207ENST00000493271 VAMP3Q15836 100 aa6.07□□□□□ -1.44
SNRNP200-207ENST00000493271 A0A1B0GWB2 263 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 NCR3O14931 201 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 TIMM17BO60830 172 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 HERV-K104P63124 156 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 MT1HP80294 61 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 Q6ZVH6 145 aa6.06□□□□□ -1.44
SNRNP200-207ENST00000493271 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 TRBV10-3A0A0K0K1G6 114 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 B5MCH6 92 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 MEIG1Q5JSS6 88 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 GTF2H5Q6ZYL4 71 aa6.05□□□□□ -1.44
SNRNP200-207ENST00000493271 H3BUT2 72 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 FABP2P12104 132 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 UBE2V1Q13404 147 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 LYRM7Q5U5X0 104 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 RAB37Q96AX2 223 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 SPANXDQ9BXN6 97 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
SNRNP200-207ENST00000493271 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
SNRNP200-207ENST00000493271 A0A1W2PPM0 123 aa6.03□□□□□ -1.44
SNRNP200-207ENST00000493271 K7ERJ3 54 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms