RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 SCGB1C2P0DMR2 95 aa13.75□□□□□ -0.21
PSPC1-204ENST00000492741 TRIAP1O43715 76 aa13.74□□□□□ -0.21
PSPC1-204ENST00000492741 KRTAP11-1Q8IUC1 163 aa13.74□□□□□ -0.21
PSPC1-204ENST00000492741 COX6CP09669 75 aa13.73□□□□□ -0.21
PSPC1-204ENST00000492741 VAMP3Q15836 100 aa13.73□□□□□ -0.21
PSPC1-204ENST00000492741 DNAH8Q96JB1 4490 aa13.71□□□□□ -0.21
PSPC1-204ENST00000492741 XGP55808 180 aa13.71□□□□□ -0.21
PSPC1-204ENST00000492741 ETDCA0A1B0GVM5 59 aa13.7□□□□□ -0.22
PSPC1-204ENST00000492741 LRP1BQ9NZR2 4599 aa13.7□□□□□ -0.22
PSPC1-204ENST00000492741 DYNC1H1Q14204 4646 aaKnown RBP13.67□□□□□ -0.22
PSPC1-204ENST00000492741 COX7BP24311 80 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 SPRR1AP35321 89 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 PSORS1C2Q9UIG4 136 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 A0A1W2PPM0 123 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 LYRM7Q5U5X0 104 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
PSPC1-204ENST00000492741 H0YGX0 51 aa13.66□□□□□ -0.22
PSPC1-204ENST00000492741 FABP2P12104 132 aa13.66□□□□□ -0.22
PSPC1-204ENST00000492741 TRBV7-6A0A0J9YX20 115 aa13.65□□□□□ -0.22
PSPC1-204ENST00000492741 C1orf137Q5JT78 98 aa13.64□□□□□ -0.23
PSPC1-204ENST00000492741 KRTAP4-16G5E9R7 235 aaPredicted RBP13.63□□□□□ -0.23
PSPC1-204ENST00000492741 BCE1O60756 84 aa13.63□□□□□ -0.23
PSPC1-204ENST00000492741 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
PSPC1-204ENST00000492741 ELOF1P60002 83 aaKnown RBP13.63□□□□□ -0.23
PSPC1-204ENST00000492741 CLEC2BQ92478 149 aa13.63□□□□□ -0.23
PSPC1-204ENST00000492741 B5MCH6 92 aa13.62□□□□□ -0.23
PSPC1-204ENST00000492741 UBE2AP49459 152 aa13.62□□□□□ -0.23
PSPC1-204ENST00000492741 PRLHP81277 87 aa13.61□□□□□ -0.23
PSPC1-204ENST00000492741 Q6ZRX8 168 aa13.61□□□□□ -0.23
PSPC1-204ENST00000492741 SLC25A20O43772 301 aa13.59□□□□□ -0.23
PSPC1-204ENST00000492741 CDK2AP2O75956 126 aa13.59□□□□□ -0.23
PSPC1-204ENST00000492741 SNCGO76070 127 aa13.59□□□□□ -0.23
PSPC1-204ENST00000492741 LINC00528Q8N1L1 170 aa13.59□□□□□ -0.23
PSPC1-204ENST00000492741 LINC00575Q6W349 94 aa13.57□□□□□ -0.24
PSPC1-204ENST00000492741 FAM218AQ96MZ4 157 aa13.57□□□□□ -0.24
PSPC1-204ENST00000492741 SPCS1Q9Y6A9 102 aa13.57□□□□□ -0.24
PSPC1-204ENST00000492741 TRBV20-1A0A075B6N2 111 aa13.56□□□□□ -0.24
PSPC1-204ENST00000492741 TCL1BO95988 128 aa13.56□□□□□ -0.24
PSPC1-204ENST00000492741 hADV29S1A0JD25 119 aa13.55□□□□□ -0.24
PSPC1-204ENST00000492741 ATXN8Q156A1 80 aa13.55□□□□□ -0.24
PSPC1-204ENST00000492741 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
PSPC1-204ENST00000492741 DHRS4-AS1Q9P1J3 65 aa13.55□□□□□ -0.24
PSPC1-204ENST00000492741 INAFM2P0DMQ5 153 aa13.54□□□□□ -0.24
PSPC1-204ENST00000492741 RPL37AP61513 92 aaKnown RBP13.54□□□□□ -0.24
PSPC1-204ENST00000492741 Q9BRP9 147 aa13.53□□□□□ -0.24
PSPC1-204ENST00000492741 H0Y9J4 135 aa13.53□□□□□ -0.24
PSPC1-204ENST00000492741 LST1O00453 97 aa13.53□□□□□ -0.24
PSPC1-204ENST00000492741 IGLV7-43P04211 117 aa13.53□□□□□ -0.24
PSPC1-204ENST00000492741 A0A1B0GV90 55 aa13.52□□□□□ -0.25
PSPC1-204ENST00000492741 DNAL4O96015 105 aa13.51□□□□□ -0.25
PSPC1-204ENST00000492741 A0A1B0GX51 115 aa13.5□□□□□ -0.25
PSPC1-204ENST00000492741 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
PSPC1-204ENST00000492741 ZNF861PO60384 105 aa13.5□□□□□ -0.25
PSPC1-204ENST00000492741 GTF2H5Q6ZYL4 71 aa13.49□□□□□ -0.25
PSPC1-204ENST00000492741 KRTAP13-1Q8IUC0 172 aa13.49□□□□□ -0.25
PSPC1-204ENST00000492741 SMCR5Q8TEV8 140 aa13.49□□□□□ -0.25
PSPC1-204ENST00000492741 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
PSPC1-204ENST00000492741 H3BMG7 143 aa13.48□□□□□ -0.25
PSPC1-204ENST00000492741 K7EP34 96 aa13.48□□□□□ -0.25
PSPC1-204ENST00000492741 TRACP01848 142 aa13.47□□□□□ -0.25
PSPC1-204ENST00000492741 FAM229AH3BQW9 127 aa13.47□□□□□ -0.25
PSPC1-204ENST00000492741 ERC2-IT1O76042 136 aa13.47□□□□□ -0.25
PSPC1-204ENST00000492741 Q6ZQY7 126 aa13.44□□□□□ -0.26
PSPC1-204ENST00000492741 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.42□□□□□ -0.26
PSPC1-204ENST00000492741 PLA2G1BP04054 148 aaKnown RBP13.42□□□□□ -0.26
PSPC1-204ENST00000492741 C9JAW5 83 aa13.41□□□□□ -0.26
PSPC1-204ENST00000492741 DEFB105AQ8NG35 78 aa13.41□□□□□ -0.26
PSPC1-204ENST00000492741 ST20-AS1Q8NBB2 130 aa13.4□□□□□ -0.26
PSPC1-204ENST00000492741 ORMDL1Q9P0S3 153 aa13.4□□□□□ -0.26
PSPC1-204ENST00000492741 VPS13BQ7Z7G8 4022 aa13.39□□□□□ -0.27
PSPC1-204ENST00000492741 MTURNQ8N3F0 131 aa13.38□□□□□ -0.27
PSPC1-204ENST00000492741 OCIAD2Q56VL3 154 aa13.37□□□□□ -0.27
PSPC1-204ENST00000492741 Q5VSD8 79 aa13.37□□□□□ -0.27
PSPC1-204ENST00000492741 GHRHP01286 108 aa13.36□□□□□ -0.27
PSPC1-204ENST00000492741 BAALC-AS2P0C853 105 aa13.36□□□□□ -0.27
PSPC1-204ENST00000492741 UBE2V1Q13404 147 aa13.35□□□□□ -0.27
PSPC1-204ENST00000492741 ZNF706Q9Y5V0 76 aaPredicted RBP13.35□□□□□ -0.27
PSPC1-204ENST00000492741 GAGE2AQ6NT46 116 aa13.34□□□□□ -0.27
PSPC1-204ENST00000492741 KRTAP10-4P60372 401 aaPredicted RBP13.33□□□□□ -0.28
PSPC1-204ENST00000492741 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
PSPC1-204ENST00000492741 TMEM256-PLSCR3K7ERE1 68 aa13.32□□□□□ -0.28
PSPC1-204ENST00000492741 HSPG2P98160 4391 aa13.32□□□□□ -0.28
PSPC1-204ENST00000492741 TEX49A0A1B0GTD5 131 aa13.31□□□□□ -0.28
PSPC1-204ENST00000492741 H3BQ85 93 aa13.31□□□□□ -0.28
PSPC1-204ENST00000492741 Q8N1X5 172 aa13.31□□□□□ -0.28
PSPC1-204ENST00000492741 Q8N377 158 aa13.3□□□□□ -0.28
PSPC1-204ENST00000492741 SPRR4Q96PI1 79 aa13.3□□□□□ -0.28
PSPC1-204ENST00000492741 IGLV5-48A0A075B6I7 105 aa13.3□□□□□ -0.28
PSPC1-204ENST00000492741 LINC01547P58512 204 aaPredicted RBP13.3□□□□□ -0.28
PSPC1-204ENST00000492741 RYR1P21817 5038 aa13.29□□□□□ -0.28
PSPC1-204ENST00000492741 SRRM2Q9UQ35 2752 aaKnown RBP13.29□□□□□ -0.28
PSPC1-204ENST00000492741 ANKRD29Q8N6D5 301 aa13.28□□□□□ -0.28
PSPC1-204ENST00000492741 H3BT86 120 aa13.27□□□□□ -0.28
PSPC1-204ENST00000492741 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.28
PSPC1-204ENST00000492741 FAT1Q14517 4588 aa13.27□□□□□ -0.29
PSPC1-204ENST00000492741 F8W1H4 67 aa13.27□□□□□ -0.29
PSPC1-204ENST00000492741 PRO0461Q9UI25 63 aa13.26□□□□□ -0.29
PSPC1-204ENST00000492741 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
PSPC1-204ENST00000492741 KIAA1109Q2LD37 5005 aa13.25□□□□□ -0.29
PSPC1-204ENST00000492741 ANAPC11Q9NYG5 84 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms