RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 LINC00518Q8N0U6 118 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 HIGD1BQ9P298 99 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 S100A12P80511 92 aa9.09□□□□□ -0.95
CDC42SE1-205ENST00000491825 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-205ENST00000491825 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
CDC42SE1-205ENST00000491825 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
CDC42SE1-205ENST00000491825 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
CDC42SE1-205ENST00000491825 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
CDC42SE1-205ENST00000491825 H0Y9J4 135 aa9.07□□□□□ -0.96
CDC42SE1-205ENST00000491825 SMIM6P0DI80 62 aa9.07□□□□□ -0.96
CDC42SE1-205ENST00000491825 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
CDC42SE1-205ENST00000491825 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-205ENST00000491825 TRAV23DV6A0A075B6W5 121 aa9.05□□□□□ -0.96
CDC42SE1-205ENST00000491825 UBE2AP49459 152 aa9.05□□□□□ -0.96
CDC42SE1-205ENST00000491825 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
CDC42SE1-205ENST00000491825 LPAP08519 4548 aa9.04□□□□□ -0.96
CDC42SE1-205ENST00000491825 FAM19A1Q7Z5A9 133 aa9.04□□□□□ -0.96
CDC42SE1-205ENST00000491825 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
CDC42SE1-205ENST00000491825 PRLHP81277 87 aa9.03□□□□□ -0.96
CDC42SE1-205ENST00000491825 A4D1N5 150 aa9.02□□□□□ -0.97
CDC42SE1-205ENST00000491825 ZNF73O43830 326 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-205ENST00000491825 TAL2Q16559 108 aa9.02□□□□□ -0.97
CDC42SE1-205ENST00000491825 OR13C6PQ8NH95 151 aa9.02□□□□□ -0.97
CDC42SE1-205ENST00000491825 TRAV13-2A0A0B4J235 113 aa9.01□□□□□ -0.97
CDC42SE1-205ENST00000491825 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
CDC42SE1-205ENST00000491825 UQCR10Q9UDW1 63 aa9.01□□□□□ -0.97
CDC42SE1-205ENST00000491825 B5MCH6 92 aa8.99□□□□□ -0.97
CDC42SE1-205ENST00000491825 Q6ZRX8 168 aa8.99□□□□□ -0.97
CDC42SE1-205ENST00000491825 A6NDN8 102 aa8.98□□□□□ -0.97
CDC42SE1-205ENST00000491825 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
CDC42SE1-205ENST00000491825 HINT1P49773 126 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-205ENST00000491825 HSD52Q0P140 79 aa8.96□□□□□ -0.98
CDC42SE1-205ENST00000491825 CEND1Q8N111 149 aa8.96□□□□□ -0.98
CDC42SE1-205ENST00000491825 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.98
CDC42SE1-205ENST00000491825 TRBV7-6A0A0J9YX20 115 aa8.95□□□□□ -0.98
CDC42SE1-205ENST00000491825 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
CDC42SE1-205ENST00000491825 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
CDC42SE1-205ENST00000491825 A0A0B4J2C4 111 aa8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 TMEM238LA0A1B0GVL6 79 aa8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 A6NJY4 79 aa8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 C6orf99Q4VX62 202 aa8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 Q9BRP9 147 aa8.94□□□□□ -0.98
CDC42SE1-205ENST00000491825 C12orf57Q99622 126 aa8.93□□□□□ -0.98
CDC42SE1-205ENST00000491825 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
CDC42SE1-205ENST00000491825 CFC1P0CG37 223 aa8.92□□□□□ -0.98
CDC42SE1-205ENST00000491825 SMIM11BQ8TCY0 68 aa8.92□□□□□ -0.98
CDC42SE1-205ENST00000491825 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-205ENST00000491825 A0A1B0GWB2 263 aa8.91□□□□□ -0.98
CDC42SE1-205ENST00000491825 RPL13AP40429 203 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-205ENST00000491825 FXYD2P54710 66 aa8.91□□□□□ -0.98
CDC42SE1-205ENST00000491825 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
CDC42SE1-205ENST00000491825 COX7BP24311 80 aa8.9□□□□□ -0.98
CDC42SE1-205ENST00000491825 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.98
CDC42SE1-205ENST00000491825 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
CDC42SE1-205ENST00000491825 DHRS4-AS1Q9P1J3 65 aa8.9□□□□□ -0.98
CDC42SE1-205ENST00000491825 RAB37Q96AX2 223 aa8.89□□□□□ -0.99
CDC42SE1-205ENST00000491825 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
CDC42SE1-205ENST00000491825 TSTD3H0UI37 97 aa8.87□□□□□ -0.99
CDC42SE1-205ENST00000491825 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
CDC42SE1-205ENST00000491825 A0A087X002 238 aa8.86□□□□□ -0.99
CDC42SE1-205ENST00000491825 CRYGAP11844 174 aa8.86□□□□□ -0.99
CDC42SE1-205ENST00000491825 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
CDC42SE1-205ENST00000491825 MUC2Q02817 5179 aa8.85□□□□□ -0.99
CDC42SE1-205ENST00000491825 VAMP3Q15836 100 aa8.84□□□□□ -0.99
CDC42SE1-205ENST00000491825 BVES-AS1Q5T3Y7 98 aa8.84□□□□□ -0.99
CDC42SE1-205ENST00000491825 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-205ENST00000491825 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
CDC42SE1-205ENST00000491825 H7C2G1 150 aa8.81□□□□□ -1
CDC42SE1-205ENST00000491825 M0R143 59 aa8.81□□□□□ -1
CDC42SE1-205ENST00000491825 CTAG1AP78358 180 aa8.81□□□□□ -1
CDC42SE1-205ENST00000491825 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
CDC42SE1-205ENST00000491825 K7ERJ3 54 aa8.8□□□□□ -1
CDC42SE1-205ENST00000491825 SPRR1BP22528 89 aa8.8□□□□□ -1
CDC42SE1-205ENST00000491825 GAGE2AQ6NT46 116 aa8.8□□□□□ -1
CDC42SE1-205ENST00000491825 LINC00575Q6W349 94 aa8.8□□□□□ -1
CDC42SE1-205ENST00000491825 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
CDC42SE1-205ENST00000491825 SLC25A20O43772 301 aa8.79□□□□□ -1
CDC42SE1-205ENST00000491825 Q1RN00 199 aa8.79□□□□□ -1
CDC42SE1-205ENST00000491825 TYMSOSQ8TAI1 123 aa8.79□□□□□ -1
CDC42SE1-205ENST00000491825 IGLV5-48A0A075B6I7 105 aa8.77□□□□□ -1.01
CDC42SE1-205ENST00000491825 H0YGX0 51 aa8.77□□□□□ -1.01
CDC42SE1-205ENST00000491825 hADV29S1A0JD25 119 aa8.76□□□□□ -1.01
CDC42SE1-205ENST00000491825 TRIAP1O43715 76 aa8.75□□□□□ -1.01
CDC42SE1-205ENST00000491825 TSPAN13O95857 204 aa8.75□□□□□ -1.01
CDC42SE1-205ENST00000491825 C3orf22Q8N5N4 141 aa8.75□□□□□ -1.01
CDC42SE1-205ENST00000491825 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
CDC42SE1-205ENST00000491825 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-205ENST00000491825 PRR4Q16378 134 aa8.74□□□□□ -1.01
CDC42SE1-205ENST00000491825 A0A1B0GX51 115 aa8.72□□□□□ -1.01
CDC42SE1-205ENST00000491825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-205ENST00000491825 Q6ZQY7 126 aa8.72□□□□□ -1.01
CDC42SE1-205ENST00000491825 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 SNCGO76070 127 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 COX6CP09669 75 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 PSMB2P49721 201 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 MOBPQ13875 183 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
CDC42SE1-205ENST00000491825 PPDPFLQ8WWR9 84 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms