RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 DDTP30046 118 aa4.99□□□□□ -1.61
HDAC3-211ENST00000491581 HERV-K104P63124 156 aa4.99□□□□□ -1.61
HDAC3-211ENST00000491581 SFTA2Q6UW10 78 aa4.99□□□□□ -1.61
HDAC3-211ENST00000491581 TTTY13Q9BZ97 58 aa4.99□□□□□ -1.61
HDAC3-211ENST00000491581 COLCA2A8K830 154 aa4.98□□□□□ -1.61
HDAC3-211ENST00000491581 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
HDAC3-211ENST00000491581 DPM2O94777 84 aa4.97□□□□□ -1.61
HDAC3-211ENST00000491581 Q8N377 158 aa4.97□□□□□ -1.61
HDAC3-211ENST00000491581 ZNF706Q9Y5V0 76 aaPredicted RBP4.97□□□□□ -1.61
HDAC3-211ENST00000491581 A0A0J9YXY3 114 aa4.96□□□□□ -1.62
HDAC3-211ENST00000491581 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
HDAC3-211ENST00000491581 IGKCP01834 107 aa4.96□□□□□ -1.62
HDAC3-211ENST00000491581 LGALS3P17931 250 aaKnown RBP4.96□□□□□ -1.62
HDAC3-211ENST00000491581 SPAG11AQ6PDA7 123 aa4.96□□□□□ -1.62
HDAC3-211ENST00000491581 Q6ZRX8 168 aa4.96□□□□□ -1.62
HDAC3-211ENST00000491581 LOC107984156A0A0G2JMH3 177 aa4.95□□□□□ -1.62
HDAC3-211ENST00000491581 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
HDAC3-211ENST00000491581 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
HDAC3-211ENST00000491581 ARL17AQ8IVW1 177 aa4.95□□□□□ -1.62
HDAC3-211ENST00000491581 LITAFQ99732 161 aa4.95□□□□□ -1.62
HDAC3-211ENST00000491581 TRAV23DV6A0A075B6W5 121 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 A0A0G2JQZ4 141 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 PLNP26678 52 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 S100A7L2Q5SY68 101 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 C9orf153Q5TBE3 101 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 MAP1LC3CQ9BXW4 147 aa4.94□□□□□ -1.62
HDAC3-211ENST00000491581 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
HDAC3-211ENST00000491581 TRBV10-2A0A0K0K1G8 114 aa4.93□□□□□ -1.62
HDAC3-211ENST00000491581 SPINK1P00995 79 aa4.93□□□□□ -1.62
HDAC3-211ENST00000491581 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
HDAC3-211ENST00000491581 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
HDAC3-211ENST00000491581 HSPB8Q9UJY1 196 aa4.93□□□□□ -1.62
HDAC3-211ENST00000491581 E9PLD3 99 aa4.92□□□□□ -1.62
HDAC3-211ENST00000491581 ZNF73O43830 326 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-211ENST00000491581 MIEN1Q9BRT3 115 aa4.92□□□□□ -1.62
HDAC3-211ENST00000491581 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 NDUFC2O95298 119 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HERVK_113P61574 105 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-211ENST00000491581 LINC00308Q8TCZ7 52 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
HDAC3-211ENST00000491581 C9orf92A6NGG3 77 aa4.9□□□□□ -1.63
HDAC3-211ENST00000491581 H7C2G1 150 aa4.9□□□□□ -1.63
HDAC3-211ENST00000491581 NMUP48645 174 aa4.9□□□□□ -1.63
HDAC3-211ENST00000491581 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
HDAC3-211ENST00000491581 Q1RN00 199 aa4.89□□□□□ -1.63
HDAC3-211ENST00000491581 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
HDAC3-211ENST00000491581 DEFB105AQ8NG35 78 aa4.89□□□□□ -1.63
HDAC3-211ENST00000491581 C3orf79P0CE67 100 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 CTAG1AP78358 180 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 S100A12P80511 92 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
HDAC3-211ENST00000491581 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
HDAC3-211ENST00000491581 SLC25A20O43772 301 aa4.87□□□□□ -1.63
HDAC3-211ENST00000491581 C6orf99Q4VX62 202 aa4.87□□□□□ -1.63
HDAC3-211ENST00000491581 ANKRD39Q53RE8 183 aa4.87□□□□□ -1.63
HDAC3-211ENST00000491581 LINC01545Q5VT33 79 aa4.87□□□□□ -1.63
HDAC3-211ENST00000491581 SPANXCQ9NY87 97 aa4.86□□□□□ -1.63
HDAC3-211ENST00000491581 SEC61BP60468 96 aaKnown RBP4.85□□□□□ -1.63
HDAC3-211ENST00000491581 KRTDAPP60985 99 aa4.85□□□□□ -1.63
HDAC3-211ENST00000491581 PCOTHQ58A44 107 aa4.85□□□□□ -1.63
HDAC3-211ENST00000491581 SPRR1BP22528 89 aa4.84□□□□□ -1.63
HDAC3-211ENST00000491581 LINC01547P58512 204 aaPredicted RBP4.84□□□□□ -1.63
HDAC3-211ENST00000491581 ELOF1P60002 83 aaKnown RBP4.84□□□□□ -1.63
HDAC3-211ENST00000491581 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.63
HDAC3-211ENST00000491581 JOSD1Q15040 202 aaPredicted RBP4.84□□□□□ -1.63
HDAC3-211ENST00000491581 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
HDAC3-211ENST00000491581 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
HDAC3-211ENST00000491581 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
HDAC3-211ENST00000491581 COX7BP24311 80 aa4.83□□□□□ -1.64
HDAC3-211ENST00000491581 TIMM17BO60830 172 aa4.82□□□□□ -1.64
HDAC3-211ENST00000491581 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
HDAC3-211ENST00000491581 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
HDAC3-211ENST00000491581 MT1HP80294 61 aa4.81□□□□□ -1.64
HDAC3-211ENST00000491581 TAL2Q16559 108 aa4.81□□□□□ -1.64
HDAC3-211ENST00000491581 MUSTN1Q8IVN3 82 aa4.81□□□□□ -1.64
HDAC3-211ENST00000491581 SPANXDQ9BXN6 97 aa4.81□□□□□ -1.64
HDAC3-211ENST00000491581 A6NDN8 102 aa4.8□□□□□ -1.64
HDAC3-211ENST00000491581 GHRHP01286 108 aa4.8□□□□□ -1.64
HDAC3-211ENST00000491581 HINT1P49773 126 aaPredicted RBP4.8□□□□□ -1.64
HDAC3-211ENST00000491581 SCGB1D4Q6XE38 83 aa4.8□□□□□ -1.64
HDAC3-211ENST00000491581 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
HDAC3-211ENST00000491581 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
HDAC3-211ENST00000491581 C1orf195Q5TG92 126 aa4.79□□□□□ -1.64
HDAC3-211ENST00000491581 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
HDAC3-211ENST00000491581 SMIM11BQ8TCY0 68 aa4.78□□□□□ -1.64
HDAC3-211ENST00000491581 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms