RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	C22orf24	Q9Y442	160 aa		4.22	□□□□□ -1.73
FN1-223	ENST00000490833	HIVEP1	P15822	2718 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	LOC107984640	A0A0U1RRK4	108 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	FAM236A	A0A1B0GUQ0	79 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	FAM236B	A0A1B0GV22	79 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	PRY	O14603	147 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	PLA2G1B	P04054	148 aa	Known RBP	4.21	□□□□□ -1.74
FN1-223	ENST00000490833	NHLRC4	P0CG21	123 aa	Predicted RBP	4.21	□□□□□ -1.74
FN1-223	ENST00000490833	C3orf22	Q8N5N4	141 aa		4.21	□□□□□ -1.74
FN1-223	ENST00000490833	RPL37AP8	A6NKH3	93 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	COX7C	P15954	63 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	HIST1H4A	P62805	103 aa	Known RBP	4.2	□□□□□ -1.74
FN1-223	ENST00000490833	PRR3	P79522	188 aa	Known RBP	4.2	□□□□□ -1.74
FN1-223	ENST00000490833		Q6ZQT0	140 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833		Q6ZQY7	126 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833		Q6ZRU5	148 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	C15orf56	Q8N910	161 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	LINC00526	Q96FQ7	95 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	LINC00846	Q9NV44	126 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	LINC00474	Q9P2X8	69 aa		4.2	□□□□□ -1.74
FN1-223	ENST00000490833	SLPI	P03973	132 aa		4.19	□□□□□ -1.74
FN1-223	ENST00000490833	SERP2	Q8N6R1	65 aa		4.19	□□□□□ -1.74
FN1-223	ENST00000490833	TRBV7-4	A0A0J9YYF1	115 aa		4.18	□□□□□ -1.74
FN1-223	ENST00000490833	ETDC	A0A1B0GVM5	59 aa		4.18	□□□□□ -1.74
FN1-223	ENST00000490833	CRYGA	P11844	174 aa		4.18	□□□□□ -1.74
FN1-223	ENST00000490833	FUS	P35637	526 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
FN1-223	ENST00000490833	HIGD2B	Q4VC39	106 aa		4.18	□□□□□ -1.74
FN1-223	ENST00000490833	XAGE1A	Q9HD64	81 aa		4.18	□□□□□ -1.74
FN1-223	ENST00000490833	ANK3	Q12955	4377 aa	Known RBP	4.18	□□□□□ -1.74
FN1-223	ENST00000490833	C9orf153	Q5TBE3	101 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833		Q6ZRP5	223 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833	SMCR5	Q8TEV8	140 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833	RETN	Q9HD89	108 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833	LINC00588	Q9Y4M8	146 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833	ATR	Q13535	2644 aa		4.17	□□□□□ -1.74
FN1-223	ENST00000490833	NIPBL	Q6KC79	2804 aa	eCLIP	4.17	□□□□□ -1.74
FN1-223	ENST00000490833	NUPR2	A6NF83	97 aa		4.16	□□□□□ -1.74
FN1-223	ENST00000490833		B5MCH6	92 aa		4.16	□□□□□ -1.74
FN1-223	ENST00000490833	USP17L23	D6RBM5	183 aa		4.16	□□□□□ -1.74
FN1-223	ENST00000490833	PSCA	O43653	123 aa		4.16	□□□□□ -1.74
FN1-223	ENST00000490833	CNBP	P62633	177 aa	Known RBP	4.16	□□□□□ -1.74
FN1-223	ENST00000490833	IGLV1-50	A0A075B6I6	118 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	IGLV5-48	A0A075B6I7	105 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	NDUFC1	O43677	76 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	SPRR1A	P35321	89 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	RPS28	P62857	69 aa	Known RBP	4.15	□□□□□ -1.75
FN1-223	ENST00000490833	NREP	Q16612	68 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833		Q6ZRX8	168 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	MRPL55	Q7Z7F7	128 aa	Known RBP	4.15	□□□□□ -1.75
FN1-223	ENST00000490833	UBE2DNL	Q8IWF7	75 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	B9D2	Q9BPU9	175 aa		4.15	□□□□□ -1.75
FN1-223	ENST00000490833	C16orf90	A8MZG2	172 aa		4.14	□□□□□ -1.75
FN1-223	ENST00000490833		F8WEM9	126 aa		4.14	□□□□□ -1.75
FN1-223	ENST00000490833		H0Y9J4	135 aa		4.14	□□□□□ -1.75
FN1-223	ENST00000490833	TMEM258	P61165	79 aa		4.14	□□□□□ -1.75
FN1-223	ENST00000490833	HAMP	P81172	84 aa		4.14	□□□□□ -1.75
FN1-223	ENST00000490833	NBEAL2	Q6ZNJ1	2754 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	TRAV7	A0A075B6U4	112 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	IGKV3D-7	A0A0C4DH55	119 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833		K7EIL1	84 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	ERC2-IT1	O76042	136 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	LINC01547	P58512	204 aa	Predicted RBP	4.13	□□□□□ -1.75
FN1-223	ENST00000490833	C9orf129	Q5T035	196 aa	Known RBP	4.13	□□□□□ -1.75
FN1-223	ENST00000490833		Q6ZVQ6	151 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833		Q8NDZ9	215 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	C7orf33	Q8WU49	177 aa		4.13	□□□□□ -1.75
FN1-223	ENST00000490833	CCDC179	H3BU77	68 aa		4.12	□□□□□ -1.75
FN1-223	ENST00000490833	REG3G	Q6UW15	175 aa		4.12	□□□□□ -1.75
FN1-223	ENST00000490833	CUBN	O60494	3623 aa		4.1	□□□□□ -1.75
FN1-223	ENST00000490833	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.1	□□□□□ -1.75
FN1-223	ENST00000490833	BPY2	O14599	106 aa		4.1	□□□□□ -1.75
FN1-223	ENST00000490833	ATP5E	P56381	51 aa	Predicted RBP	4.1	□□□□□ -1.75
FN1-223	ENST00000490833	RPL37A	P61513	92 aa	Known RBP	4.09	□□□□□ -1.75
FN1-223	ENST00000490833	UBE2B	P63146	152 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833	C1orf137	Q5JT78	98 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833		Q8N377	158 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833	SPRR4	Q96PI1	79 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833	KRTAP3-1	Q9BYR8	98 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833	APLN	Q9ULZ1	77 aa		4.09	□□□□□ -1.75
FN1-223	ENST00000490833	VWF	P04275	2813 aa		4.08	□□□□□ -1.76
FN1-223	ENST00000490833		J3KT08	172 aa		4.08	□□□□□ -1.76
FN1-223	ENST00000490833	SERTAD4-AS1	Q5TG53	156 aa		4.08	□□□□□ -1.76
FN1-223	ENST00000490833	C9orf163	Q8N9P6	203 aa		4.08	□□□□□ -1.76
FN1-223	ENST00000490833	IGLV8-61	A0A075B6I0	122 aa		4.07	□□□□□ -1.76
FN1-223	ENST00000490833	KLKP1	Q107X0	134 aa		4.07	□□□□□ -1.76
FN1-223	ENST00000490833		Q8NBF4	154 aa		4.07	□□□□□ -1.76
FN1-223	ENST00000490833	TENM1	Q9UKZ4	2725 aa		4.07	□□□□□ -1.76
FN1-223	ENST00000490833	NBDY	A0A0U1RRE5	68 aa		4.06	□□□□□ -1.76
FN1-223	ENST00000490833	DEFB105A	Q8NG35	78 aa		4.06	□□□□□ -1.76
FN1-223	ENST00000490833	SS18L2	Q9UHA2	77 aa		4.06	□□□□□ -1.76
FN1-223	ENST00000490833	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-223	ENST00000490833	NBEAL1	Q6ZS30	2694 aa		4.06	□□□□□ -1.76
FN1-223	ENST00000490833		A0A087WVE0	104 aa		4.05	□□□□□ -1.76
FN1-223	ENST00000490833	SPRR1B	P22528	89 aa		4.05	□□□□□ -1.76
FN1-223	ENST00000490833	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-223	ENST00000490833	FAM19A1	Q7Z5A9	133 aa		4.05	□□□□□ -1.76
FN1-223	ENST00000490833		Q9BRP9	147 aa		4.04	□□□□□ -1.76
FN1-223	ENST00000490833	FBN1	P35555	2871 aa	Known RBP	4.03	□□□□□ -1.76
FN1-223	ENST00000490833	NDUFB1	O75438	58 aa		4.03	□□□□□ -1.76
FN1-223	ENST00000490833	UBE2A	P49459	152 aa		4.03	□□□□□ -1.76

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