RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 INAFM2P0DMQ5 153 aa7.64□□□□□ -1.19
HDAC1-210ENST00000490081 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
HDAC1-210ENST00000490081 CEND1Q8N111 149 aa7.64□□□□□ -1.19
HDAC1-210ENST00000490081 HSD52Q0P140 79 aa7.63□□□□□ -1.19
HDAC1-210ENST00000490081 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
HDAC1-210ENST00000490081 ZNF861PO60384 105 aa7.62□□□□□ -1.19
HDAC1-210ENST00000490081 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 TRAV23DV6A0A075B6W5 121 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 A6NJY4 79 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 RPL28P46779 137 aaKnown RBP7.61□□□□□ -1.19
HDAC1-210ENST00000490081 OR13C6PQ8NH95 151 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
HDAC1-210ENST00000490081 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
HDAC1-210ENST00000490081 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
HDAC1-210ENST00000490081 HNRNPA3P51991 378 aaKnown RBP7.6□□□□□ -1.19
HDAC1-210ENST00000490081 A6NDN8 102 aa7.59□□□□□ -1.19
HDAC1-210ENST00000490081 CFC1BP0CG36 223 aa7.59□□□□□ -1.19
HDAC1-210ENST00000490081 CFC1P0CG37 223 aa7.59□□□□□ -1.19
HDAC1-210ENST00000490081 DIRC1Q969H9 104 aa7.59□□□□□ -1.19
HDAC1-210ENST00000490081 B5MCH6 92 aa7.58□□□□□ -1.2
HDAC1-210ENST00000490081 FAM19A1Q7Z5A9 133 aa7.58□□□□□ -1.2
HDAC1-210ENST00000490081 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
HDAC1-210ENST00000490081 A0A1B0GWB2 263 aa7.57□□□□□ -1.2
HDAC1-210ENST00000490081 UBE2AP49459 152 aa7.57□□□□□ -1.2
HDAC1-210ENST00000490081 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
HDAC1-210ENST00000490081 FXYD2P54710 66 aa7.57□□□□□ -1.2
HDAC1-210ENST00000490081 Q6ZRX8 168 aa7.56□□□□□ -1.2
HDAC1-210ENST00000490081 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
HDAC1-210ENST00000490081 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
HDAC1-210ENST00000490081 PRO1854Q9UHT4 67 aa7.55□□□□□ -1.2
HDAC1-210ENST00000490081 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-210ENST00000490081 C6orf99Q4VX62 202 aa7.54□□□□□ -1.2
HDAC1-210ENST00000490081 BVES-AS1Q5T3Y7 98 aa7.54□□□□□ -1.2
HDAC1-210ENST00000490081 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
HDAC1-210ENST00000490081 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
HDAC1-210ENST00000490081 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
HDAC1-210ENST00000490081 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-210ENST00000490081 M0R143 59 aa7.53□□□□□ -1.2
HDAC1-210ENST00000490081 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
HDAC1-210ENST00000490081 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
HDAC1-210ENST00000490081 CTAG1AP78358 180 aa7.53□□□□□ -1.2
HDAC1-210ENST00000490081 PRLHP81277 87 aa7.53□□□□□ -1.2
HDAC1-210ENST00000490081 OXTP01178 125 aa7.52□□□□□ -1.21
HDAC1-210ENST00000490081 VAMP3Q15836 100 aa7.52□□□□□ -1.21
HDAC1-210ENST00000490081 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
HDAC1-210ENST00000490081 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.21
HDAC1-210ENST00000490081 COX7BP24311 80 aa7.51□□□□□ -1.21
HDAC1-210ENST00000490081 Q9BRP9 147 aa7.51□□□□□ -1.21
HDAC1-210ENST00000490081 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-210ENST00000490081 LINC01600Q96MT4 127 aa7.5□□□□□ -1.21
HDAC1-210ENST00000490081 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
HDAC1-210ENST00000490081 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
HDAC1-210ENST00000490081 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-210ENST00000490081 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
HDAC1-210ENST00000490081 H0YGX0 51 aa7.48□□□□□ -1.21
HDAC1-210ENST00000490081 J3QL48 77 aa7.48□□□□□ -1.21
HDAC1-210ENST00000490081 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
HDAC1-210ENST00000490081 FAM229BQ4G0N7 80 aa7.47□□□□□ -1.21
HDAC1-210ENST00000490081 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.21
HDAC1-210ENST00000490081 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
HDAC1-210ENST00000490081 LINC00575Q6W349 94 aa7.46□□□□□ -1.22
HDAC1-210ENST00000490081 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
HDAC1-210ENST00000490081 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
HDAC1-210ENST00000490081 A0A1B0GX51 115 aa7.44□□□□□ -1.22
HDAC1-210ENST00000490081 SPRR1BP22528 89 aa7.44□□□□□ -1.22
HDAC1-210ENST00000490081 KRTAP10-8P60410 259 aa7.44□□□□□ -1.22
HDAC1-210ENST00000490081 H7C2G1 150 aa7.43□□□□□ -1.22
HDAC1-210ENST00000490081 K7ERJ3 54 aa7.43□□□□□ -1.22
HDAC1-210ENST00000490081 SLC25A20O43772 301 aa7.43□□□□□ -1.22
HDAC1-210ENST00000490081 TSPAN13O95857 204 aa7.43□□□□□ -1.22
HDAC1-210ENST00000490081 Q1RN00 199 aa7.43□□□□□ -1.22
HDAC1-210ENST00000490081 SNCGO76070 127 aa7.42□□□□□ -1.22
HDAC1-210ENST00000490081 COX6CP09669 75 aa7.42□□□□□ -1.22
HDAC1-210ENST00000490081 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
HDAC1-210ENST00000490081 hADV29S1A0JD25 119 aa7.41□□□□□ -1.22
HDAC1-210ENST00000490081 TRIAP1O43715 76 aa7.41□□□□□ -1.22
HDAC1-210ENST00000490081 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
HDAC1-210ENST00000490081 CRYGAP11844 174 aa7.41□□□□□ -1.22
HDAC1-210ENST00000490081 TEX49A0A1B0GTD5 131 aa7.39□□□□□ -1.23
HDAC1-210ENST00000490081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-210ENST00000490081 PPDPFLQ8WWR9 84 aa7.39□□□□□ -1.23
HDAC1-210ENST00000490081 PSMB2P49721 201 aa7.38□□□□□ -1.23
HDAC1-210ENST00000490081 LINC01547P58512 204 aaPredicted RBP7.38□□□□□ -1.23
HDAC1-210ENST00000490081 OCIAD2Q56VL3 154 aa7.38□□□□□ -1.23
HDAC1-210ENST00000490081 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
HDAC1-210ENST00000490081 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
HDAC1-210ENST00000490081 A0A087X002 238 aa7.37□□□□□ -1.23
HDAC1-210ENST00000490081 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
HDAC1-210ENST00000490081 TNXBP22105 4242 aa7.37□□□□□ -1.23
HDAC1-210ENST00000490081 GHRHP01286 108 aa7.36□□□□□ -1.23
HDAC1-210ENST00000490081 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-210ENST00000490081 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
HDAC1-210ENST00000490081 FAM218AQ96MZ4 157 aa7.36□□□□□ -1.23
HDAC1-210ENST00000490081 SNHG12Q9BXW3 62 aa7.36□□□□□ -1.23
HDAC1-210ENST00000490081 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
HDAC1-210ENST00000490081 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
HDAC1-210ENST00000490081 H3BQ85 93 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms