RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MIEN1Q9BRT3 115 aa10.86□□□□□ -0.67
TNFRSF1B-202ENST00000489921 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
TNFRSF1B-202ENST00000489921 E9PLD3 99 aa10.85□□□□□ -0.67
TNFRSF1B-202ENST00000489921 NPC2P61916 151 aa10.85□□□□□ -0.67
TNFRSF1B-202ENST00000489921 ASB16-AS1Q495Z4 193 aa10.85□□□□□ -0.67
TNFRSF1B-202ENST00000489921 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
TNFRSF1B-202ENST00000489921 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
TNFRSF1B-202ENST00000489921 LITAFQ99732 161 aa10.83□□□□□ -0.68
TNFRSF1B-202ENST00000489921 ZNF73O43830 326 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1B-202ENST00000489921 ST20-AS1Q8NBB2 130 aa10.82□□□□□ -0.68
TNFRSF1B-202ENST00000489921 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF1B-202ENST00000489921 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
TNFRSF1B-202ENST00000489921 SLC25A20O43772 301 aa10.78□□□□□ -0.68
TNFRSF1B-202ENST00000489921 LINC00308Q8TCZ7 52 aa10.77□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
TNFRSF1B-202ENST00000489921 C5orf52A6NGY3 159 aa10.75□□□□□ -0.69
TNFRSF1B-202ENST00000489921 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
TNFRSF1B-202ENST00000489921 LINC01545Q5VT33 79 aa10.75□□□□□ -0.69
TNFRSF1B-202ENST00000489921 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
TNFRSF1B-202ENST00000489921 TIMM17BO60830 172 aa10.74□□□□□ -0.69
TNFRSF1B-202ENST00000489921 SPRR1BP22528 89 aa10.73□□□□□ -0.69
TNFRSF1B-202ENST00000489921 XP32Q5T750 250 aa10.73□□□□□ -0.69
TNFRSF1B-202ENST00000489921 TTTY13Q9BZ97 58 aa10.73□□□□□ -0.69
TNFRSF1B-202ENST00000489921 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1B-202ENST00000489921 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
TNFRSF1B-202ENST00000489921 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
TNFRSF1B-202ENST00000489921 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1B-202ENST00000489921 CBY1Q9Y3M2 126 aa10.69□□□□□ -0.7
TNFRSF1B-202ENST00000489921 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
TNFRSF1B-202ENST00000489921 C3orf79P0CE67 100 aa10.67□□□□□ -0.7
TNFRSF1B-202ENST00000489921 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
TNFRSF1B-202ENST00000489921 DHRS4-AS1Q9P1J3 65 aa10.67□□□□□ -0.7
TNFRSF1B-202ENST00000489921 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1B-202ENST00000489921 C6orf99Q4VX62 202 aa10.63□□□□□ -0.71
TNFRSF1B-202ENST00000489921 HRCT1Q6UXD1 115 aa10.63□□□□□ -0.71
TNFRSF1B-202ENST00000489921 COX7BP24311 80 aa10.62□□□□□ -0.71
TNFRSF1B-202ENST00000489921 LINC01547P58512 204 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1B-202ENST00000489921 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
TNFRSF1B-202ENST00000489921 LINC00518Q8N0U6 118 aa10.62□□□□□ -0.71
TNFRSF1B-202ENST00000489921 COA6Q5JTJ3 125 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1B-202ENST00000489921 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
TNFRSF1B-202ENST00000489921 KRTAP9-6A0A140TA67 174 aa10.6□□□□□ -0.71
TNFRSF1B-202ENST00000489921 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
TNFRSF1B-202ENST00000489921 KRTAP19-2Q3LHN2 52 aa10.59□□□□□ -0.71
TNFRSF1B-202ENST00000489921 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
TNFRSF1B-202ENST00000489921 SMIM29Q86T20 159 aa10.58□□□□□ -0.72
TNFRSF1B-202ENST00000489921 LIMD2Q9BT23 127 aa10.58□□□□□ -0.72
TNFRSF1B-202ENST00000489921 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
TNFRSF1B-202ENST00000489921 KRTDAPP60985 99 aa10.57□□□□□ -0.72
TNFRSF1B-202ENST00000489921 Q1RN00 199 aa10.57□□□□□ -0.72
TNFRSF1B-202ENST00000489921 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
TNFRSF1B-202ENST00000489921 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
TNFRSF1B-202ENST00000489921 CD164Q04900 197 aa10.55□□□□□ -0.72
TNFRSF1B-202ENST00000489921 TAL2Q16559 108 aa10.55□□□□□ -0.72
TNFRSF1B-202ENST00000489921 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
TNFRSF1B-202ENST00000489921 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
TNFRSF1B-202ENST00000489921 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 IFITM1P13164 125 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 PCOTHQ58A44 107 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 PCP2Q8IVA1 136 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 PRO1933Q9H354 126 aa10.52□□□□□ -0.73
TNFRSF1B-202ENST00000489921 A0A0G2JQZ4 141 aa10.51□□□□□ -0.73
TNFRSF1B-202ENST00000489921 A0A1B0GWB2 263 aa10.51□□□□□ -0.73
TNFRSF1B-202ENST00000489921 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1B-202ENST00000489921 Q5XG85 94 aa10.51□□□□□ -0.73
TNFRSF1B-202ENST00000489921 H7C2G1 150 aa10.5□□□□□ -0.73
TNFRSF1B-202ENST00000489921 A6NDN8 102 aa10.49□□□□□ -0.73
TNFRSF1B-202ENST00000489921 Q6ZVH6 145 aa10.49□□□□□ -0.73
TNFRSF1B-202ENST00000489921 C1orf195Q5TG92 126 aa10.48□□□□□ -0.73
TNFRSF1B-202ENST00000489921 AKR1D1P51857 326 aa10.47□□□□□ -0.73
TNFRSF1B-202ENST00000489921 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
TNFRSF1B-202ENST00000489921 C20orf202A1L168 122 aa10.46□□□□□ -0.73
TNFRSF1B-202ENST00000489921 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
TNFRSF1B-202ENST00000489921 SMIM11BQ8TCY0 68 aa10.45□□□□□ -0.74
TNFRSF1B-202ENST00000489921 MT1HP80294 61 aa10.44□□□□□ -0.74
TNFRSF1B-202ENST00000489921 FSIP2Q5CZC0 6907 aa10.42□□□□□ -0.74
TNFRSF1B-202ENST00000489921 A4D1N5 150 aa10.42□□□□□ -0.74
TNFRSF1B-202ENST00000489921 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
TNFRSF1B-202ENST00000489921 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
TNFRSF1B-202ENST00000489921 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1B-202ENST00000489921 LINC00575Q6W349 94 aa10.35□□□□□ -0.75
TNFRSF1B-202ENST00000489921 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
TNFRSF1B-202ENST00000489921 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
TNFRSF1B-202ENST00000489921 FLGP20930 4061 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1B-202ENST00000489921 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
TNFRSF1B-202ENST00000489921 Q6ZQY7 126 aa10.3□□□□□ -0.76
TNFRSF1B-202ENST00000489921 TCL1BO95988 128 aa10.29□□□□□ -0.76
TNFRSF1B-202ENST00000489921 LORP23490 312 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms