RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CYTL1Q9NRR1 136 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 TMEM14BQ9NUH8 114 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 BET1LQ9NYM9 111 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 BIRC6Q9NR09 4857 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 DNAH11Q96DT5 4516 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 FXYD6-FXYD2A0A087WZ82 144 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 RNASE2P10153 161 aaKnown RBP1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 UBE2G1P62253 170 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 IQCJQ1A5X6 159 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 C1orf137Q5JT78 98 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 COL5A1-AS1Q5SY13 56 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 C4orf3Q8WVX3 66 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 DNAH6Q9C0G6 4158 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 FRAS1Q86XX4 4008 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 KANTRA0A1W2PQU2 76 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 RBAKDNA6NC62 111 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 CFDP00746 253 aaPredicted RBP1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 IGKV1-17P01599 117 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 SLC25A6P12236 298 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 PRCDQ00LT1 54 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 PLGLAQ15195 96 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 IGFL1Q6UW32 110 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 C15orf53Q8NAA6 179 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 CMTM2Q8TAZ6 248 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 DYNLRB2Q8TF09 96 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 AQP10Q96PS8 301 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 LINC00474Q9P2X8 69 aa1.57□□□□□ -2.16
DEPDC1-204ENST00000489862 ALMS1Q8TCU4 4167 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 TRBV6-8A0A0A6YYG3 113 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 H3BUA1 57 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 NMBP08949 121 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 DEFB114Q30KQ6 69 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 ALKAL2Q6UX46 152 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 LINC00322Q6ZN03 302 aaPredicted RBP1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 Q6ZRN7 208 aaPredicted RBP1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 SVBPQ8N300 66 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 WFDC10AQ9H1F0 79 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 HECTD4Q9Y4D8 3996 aa1.56□□□□□ -2.16
DEPDC1-204ENST00000489862 FAM24AA6NFZ4 105 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 FAM223BA6NKX1 122 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SSSCA1O60232 199 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SNCGO76070 127 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 IGLC1P0CG04 106 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 IAPPP10997 89 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 RNASE3P12724 160 aaKnown RBP1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 CBLN1P23435 193 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SNCAP37840 140 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 DEFB1P60022 68 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 NPC2P61916 151 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 FAM223AQ8IWN6 122 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 USMG5Q96IX5 58 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 PRO1933Q9H354 126 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 CACFD1Q9UGQ2 172 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 RYR1P21817 5038 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 DNAH5Q8TE73 4624 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 FAM74A1Q5RGS3 127 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 RPL7L1Q6DKI1 246 aaKnown RBP1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 SPTSSBQ8NFR3 76 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 TVP23CQ96ET8 276 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 PSENENQ9NZ42 101 aa1.55□□□□□ -2.16
DEPDC1-204ENST00000489862 PKD1P98161 4303 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 HERC2O95714 4834 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 CEBPZOSA8MTT3 80 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 UMAD1C9J7I0 102 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 H3BRN7 92 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 LYPD5Q6UWN5 251 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 LYPD1Q8N2G4 141 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 LINC00052Q96N35 136 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 RHPN1-AS1Q9BWJ2 59 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 KIAA1109Q2LD37 5005 aa1.54□□□□□ -2.16
DEPDC1-204ENST00000489862 F8W1H4 67 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 NDUFA4O00483 81 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 SERF2P84101 59 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 ELOBQ15370 118 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 DEFB121Q5J5C9 76 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 COPS9Q8WXC6 57 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 TMEM141Q96I45 108 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 MGST2Q99735 147 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 ABCA13Q86UQ4 5058 aa1.53□□□□□ -2.16
DEPDC1-204ENST00000489862 IGKV3-7A0A075B6H7 116 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 IGKV2-24A0A0C4DH68 120 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 UBE2L5PA0A1B0GUS4 154 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 TMEM262E9PQX1 116 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 H3BQ15 152 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 PEA15Q15121 130 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 PYY3Q5JQD4 70 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 FAM213BQ8TBF2 198 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 FAM167A-AS1Q96KT0 104 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms