RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 COX7BP24311 80 aa4.36□□□□□ -1.71
HDLBP-243ENST00000488923 TTC32Q5I0X7 151 aa4.36□□□□□ -1.71
HDLBP-243ENST00000488923 UBE2DNLQ8IWF7 75 aa4.36□□□□□ -1.71
HDLBP-243ENST00000488923 NKAPP1Q8N9T2 125 aa4.36□□□□□ -1.71
HDLBP-243ENST00000488923 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
HDLBP-243ENST00000488923 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
HDLBP-243ENST00000488923 TRBV10-3A0A0K0K1G6 114 aa4.35□□□□□ -1.71
HDLBP-243ENST00000488923 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
HDLBP-243ENST00000488923 ELOF1P60002 83 aaKnown RBP4.35□□□□□ -1.71
HDLBP-243ENST00000488923 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
HDLBP-243ENST00000488923 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
HDLBP-243ENST00000488923 FBN1P35555 2871 aaKnown RBP4.34□□□□□ -1.71
HDLBP-243ENST00000488923 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 SDIM1Q6ZPB5 146 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 Q6ZRP5 223 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 Q8NDZ9 215 aa4.34□□□□□ -1.71
HDLBP-243ENST00000488923 PSCAO43653 123 aa4.33□□□□□ -1.72
HDLBP-243ENST00000488923 CCKP06307 115 aa4.33□□□□□ -1.72
HDLBP-243ENST00000488923 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
HDLBP-243ENST00000488923 APLNQ9ULZ1 77 aa4.33□□□□□ -1.72
HDLBP-243ENST00000488923 DNAH3Q8TD57 4116 aa4.33□□□□□ -1.72
HDLBP-243ENST00000488923 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 PRYO14603 147 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
HDLBP-243ENST00000488923 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 DSCR8Q96T75 97 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 DHRS4-AS1Q9P1J3 65 aa4.32□□□□□ -1.72
HDLBP-243ENST00000488923 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
HDLBP-243ENST00000488923 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
HDLBP-243ENST00000488923 Q6ZQY7 126 aa4.31□□□□□ -1.72
HDLBP-243ENST00000488923 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
HDLBP-243ENST00000488923 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
HDLBP-243ENST00000488923 Q6JHZ5 121 aa4.3□□□□□ -1.72
HDLBP-243ENST00000488923 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
HDLBP-243ENST00000488923 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
HDLBP-243ENST00000488923 ETDCA0A1B0GVM5 59 aa4.29□□□□□ -1.72
HDLBP-243ENST00000488923 B5MCH6 92 aa4.29□□□□□ -1.72
HDLBP-243ENST00000488923 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
HDLBP-243ENST00000488923 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
HDLBP-243ENST00000488923 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
HDLBP-243ENST00000488923 CMYA5Q8N3K9 4069 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 A0A1B0GW54 56 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 SPRR1AP35321 89 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 NDUFV3P56181 108 aaKnown RBP4.28□□□□□ -1.72
HDLBP-243ENST00000488923 Q6ZQT0 140 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 WWC2-AS2Q96NR7 200 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 LINC00846Q9NV44 126 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 ANK2Q01484 3957 aa4.28□□□□□ -1.72
HDLBP-243ENST00000488923 NBDYA0A0U1RRE5 68 aa4.27□□□□□ -1.73
HDLBP-243ENST00000488923 Q6ZRX8 168 aa4.27□□□□□ -1.73
HDLBP-243ENST00000488923 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
HDLBP-243ENST00000488923 SMCR5Q8TEV8 140 aa4.27□□□□□ -1.73
HDLBP-243ENST00000488923 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
HDLBP-243ENST00000488923 COL6A5A8TX70 2615 aa4.27□□□□□ -1.73
HDLBP-243ENST00000488923 CASC10Q5T4H9 136 aa4.26□□□□□ -1.73
HDLBP-243ENST00000488923 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
HDLBP-243ENST00000488923 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
HDLBP-243ENST00000488923 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
HDLBP-243ENST00000488923 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
HDLBP-243ENST00000488923 KRTAP1-5Q9BYS1 174 aa4.25□□□□□ -1.73
HDLBP-243ENST00000488923 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
HDLBP-243ENST00000488923 IGLV5-48A0A075B6I7 105 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 ATOX1O00244 68 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 C9orf163Q8N9P6 203 aa4.24□□□□□ -1.73
HDLBP-243ENST00000488923 H0Y9J4 135 aa4.23□□□□□ -1.73
HDLBP-243ENST00000488923 UBE2BP63146 152 aa4.23□□□□□ -1.73
HDLBP-243ENST00000488923 CXCL6P80162 114 aa4.23□□□□□ -1.73
HDLBP-243ENST00000488923 PKD1L1Q8TDX9 2849 aa4.23□□□□□ -1.73
HDLBP-243ENST00000488923 TENM3Q9P273 2699 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 A0A096LNI7 61 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 RPL37AP8A6NKH3 93 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 BCE1O60756 84 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 CD164Q04900 197 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 C4orf26Q17RF5 130 aa4.22□□□□□ -1.73
HDLBP-243ENST00000488923 NOTCH1P46531 2555 aa4.21□□□□□ -1.73
HDLBP-243ENST00000488923 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 F8WEM9 126 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 J3KT08 172 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 OXTP01178 125 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 FUSP35637 526 aaKnown RBP eCLIP4.21□□□□□ -1.74
HDLBP-243ENST00000488923 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
HDLBP-243ENST00000488923 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
HDLBP-243ENST00000488923 Q6ZVQ6 151 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 Q8N377 158 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
HDLBP-243ENST00000488923 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.2□□□□□ -1.74
HDLBP-243ENST00000488923 IGKV2-24A0A0C4DH68 120 aa4.2□□□□□ -1.74
HDLBP-243ENST00000488923 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms