RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 GIG44P09565 113 aaPredicted RBP3.09□□□□□ -1.92
CDC42BPA-213ENST00000488131 DSCR10P59022 87 aa3.09□□□□□ -1.92
CDC42BPA-213ENST00000488131 PRO3102Q9H379 93 aa3.09□□□□□ -1.92
CDC42BPA-213ENST00000488131 SPTAN1Q13813 2472 aaKnown RBP3.09□□□□□ -1.92
CDC42BPA-213ENST00000488131 DMXL1Q9Y485 3027 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 CREBBPQ92793 2442 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 C2CD3Q4AC94 2353 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 KPRPQ5T749 579 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 SPRR4Q96PI1 79 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 ZNF702PQ9H963 129 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 ACACAQ13085 2346 aa3.08□□□□□ -1.92
CDC42BPA-213ENST00000488131 A0A1W2PNM2 257 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 MP68P56378 58 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 Q8NBF4 154 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 SPTA1P02549 2419 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 A6NED7 52 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 CYSRT1A8MQ03 144 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 K7EQZ3 153 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 MSMBP08118 114 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 PRR4Q16378 134 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 DEFB112Q30KQ8 113 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 CLPSL2Q6UWE3 100 aa3.07□□□□□ -1.92
CDC42BPA-213ENST00000488131 REG3AQ06141 175 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 MOBPQ13875 183 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 DEFB136Q30KP8 78 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 C18orf65Q6ZTR6 163 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 Q8N377 158 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 C9orf163Q8N9P6 203 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 C6orf48Q9UBA6 75 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 ASH1LQ9NR48 2969 aaKnown RBP3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 CELSR1Q9NYQ6 3014 aa3.06□□□□□ -1.92
CDC42BPA-213ENST00000488131 OTOGLQ3ZCN5 2332 aa3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 CMC4P56277 68 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 NKAPP1Q8N9T2 125 aa3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 TLN1Q9Y490 2541 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 IGKV2D-24A0A075B6R9 120 aa3.05□□□□□ -1.92
CDC42BPA-213ENST00000488131 LAMA5O15230 3695 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 ATMQ13315 3056 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 A0A087X002 238 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 COA5Q86WW8 74 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 PRO0255Q9UI72 69 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
CDC42BPA-213ENST00000488131 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 B4DSR2 109 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 EGFEM1PQ0D2K5 195 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 WFDC10AQ9H1F0 79 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
CDC42BPA-213ENST00000488131 IGLV7-46A0A075B6I9 117 aa3.03□□□□□ -1.93
CDC42BPA-213ENST00000488131 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.93
CDC42BPA-213ENST00000488131 DHRS4-AS1Q9P1J3 65 aa3.03□□□□□ -1.93
CDC42BPA-213ENST00000488131 H0Y9P7 68 aa3.02□□□□□ -1.93
CDC42BPA-213ENST00000488131 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 Q6ZRX8 168 aa3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 PRB2P02812 416 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 LINC00313P59037 77 aa3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
CDC42BPA-213ENST00000488131 CHD6Q8TD26 2715 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 DEFB130BP0DP73 79 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 DEFB130AP0DP74 79 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 SPRR1AP35321 89 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 C7orf33Q8WU49 177 aa3□□□□□ -1.93
CDC42BPA-213ENST00000488131 GVINP1Q7Z2Y8 2422 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 LELP1Q5T871 98 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 COL12A1Q99715 3063 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 ATRXP46100 2492 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 SPINK7P58062 85 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 DEFB105AQ8NG35 78 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 CCL19Q99731 98 aa2.99□□□□□ -1.93
CDC42BPA-213ENST00000488131 BDP1A6H8Y1 2624 aa2.98□□□□□ -1.93
CDC42BPA-213ENST00000488131 CSPG4Q6UVK1 2322 aa2.98□□□□□ -1.93
CDC42BPA-213ENST00000488131 A0A096LPF7 62 aa2.98□□□□□ -1.93
CDC42BPA-213ENST00000488131 IGLV1-51P01701 117 aa2.98□□□□□ -1.93
CDC42BPA-213ENST00000488131 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-213ENST00000488131 ITPR1Q14643 2758 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 CRYBG3Q68DQ2 2970 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 NBPF19A0A087WUL8 3843 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 HIVEP3Q5T1R4 2406 aa2.97□□□□□ -1.93
CDC42BPA-213ENST00000488131 WFDC10BQ8IUB3 73 aa2.96□□□□□ -1.93
CDC42BPA-213ENST00000488131 C15orf56Q8N910 161 aa2.96□□□□□ -1.93
CDC42BPA-213ENST00000488131 Q8NAQ8 132 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms