RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 LIMD2Q9BT23 127 aa4.92□□□□□ -1.62
PTPN7-213ENST00000486116 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
PTPN7-213ENST00000486116 PRYO14603 147 aa4.91□□□□□ -1.62
PTPN7-213ENST00000486116 LINC00310P59036 64 aa4.91□□□□□ -1.62
PTPN7-213ENST00000486116 ERG28Q9UKR5 140 aa4.91□□□□□ -1.62
PTPN7-213ENST00000486116 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.63
PTPN7-213ENST00000486116 MDN1Q9NU22 5596 aa4.9□□□□□ -1.63
PTPN7-213ENST00000486116 LINC00587B1AMM8 73 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 PLNP26678 52 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HERV-K104P63124 156 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HRCT1Q6UXD1 115 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
PTPN7-213ENST00000486116 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
PTPN7-213ENST00000486116 C20orf202A1L168 122 aa4.88□□□□□ -1.63
PTPN7-213ENST00000486116 DPM2O94777 84 aa4.88□□□□□ -1.63
PTPN7-213ENST00000486116 FABP4P15090 132 aa4.88□□□□□ -1.63
PTPN7-213ENST00000486116 MAP1LC3CQ9BXW4 147 aa4.88□□□□□ -1.63
PTPN7-213ENST00000486116 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 H0Y8G0 127 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 LEPROTO15243 131 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 ATP6V1G1O75348 118 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 LINC00158P58513 81 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
PTPN7-213ENST00000486116 KMT2DO14686 5537 aa4.86□□□□□ -1.63
PTPN7-213ENST00000486116 B5MCH6 92 aa4.86□□□□□ -1.63
PTPN7-213ENST00000486116 IGKCP01834 107 aa4.86□□□□□ -1.63
PTPN7-213ENST00000486116 HERVK_113P61574 105 aa4.86□□□□□ -1.63
PTPN7-213ENST00000486116 Q9BRP9 147 aa4.86□□□□□ -1.63
PTPN7-213ENST00000486116 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
PTPN7-213ENST00000486116 S100A1P23297 94 aa4.85□□□□□ -1.63
PTPN7-213ENST00000486116 NMUP48645 174 aa4.85□□□□□ -1.63
PTPN7-213ENST00000486116 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
PTPN7-213ENST00000486116 LOC107984156A0A0G2JMH3 177 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 SYS1-DBNDD2H3BUS1 97 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 J3QQQ9 107 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 SMIM13P0DJ93 91 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 MEIG1Q5JSS6 88 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 PET117Q6UWS5 81 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 ARL17AQ8IVW1 177 aa4.84□□□□□ -1.63
PTPN7-213ENST00000486116 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
PTPN7-213ENST00000486116 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
PTPN7-213ENST00000486116 PMCHL2Q9BQD1 86 aa4.83□□□□□ -1.64
PTPN7-213ENST00000486116 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
PTPN7-213ENST00000486116 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
PTPN7-213ENST00000486116 NCR3O14931 201 aa4.82□□□□□ -1.64
PTPN7-213ENST00000486116 LINC01545Q5VT33 79 aa4.82□□□□□ -1.64
PTPN7-213ENST00000486116 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
PTPN7-213ENST00000486116 TRBV10-3A0A0K0K1G6 114 aa4.81□□□□□ -1.64
PTPN7-213ENST00000486116 E9PLD3 99 aa4.81□□□□□ -1.64
PTPN7-213ENST00000486116 AKR1D1P51857 326 aa4.81□□□□□ -1.64
PTPN7-213ENST00000486116 TSPEAR-AS2P59090 65 aa4.81□□□□□ -1.64
PTPN7-213ENST00000486116 BOD1L2Q8IYS8 172 aa4.81□□□□□ -1.64
PTPN7-213ENST00000486116 H7C2G1 150 aa4.8□□□□□ -1.64
PTPN7-213ENST00000486116 Q6ZRX8 168 aa4.8□□□□□ -1.64
PTPN7-213ENST00000486116 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
PTPN7-213ENST00000486116 TRBV10-2A0A0K0K1G8 114 aa4.79□□□□□ -1.64
PTPN7-213ENST00000486116 C3orf79P0CE67 100 aa4.79□□□□□ -1.64
PTPN7-213ENST00000486116 S100A12P80511 92 aa4.79□□□□□ -1.64
PTPN7-213ENST00000486116 ATP11AUNQ6ZP68 121 aa4.79□□□□□ -1.64
PTPN7-213ENST00000486116 A0A0J9YXY3 114 aa4.78□□□□□ -1.64
PTPN7-213ENST00000486116 NDUFC2O95298 119 aa4.78□□□□□ -1.64
PTPN7-213ENST00000486116 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
PTPN7-213ENST00000486116 TIMM17BO60830 172 aa4.77□□□□□ -1.65
PTPN7-213ENST00000486116 KRTDAPP60985 99 aa4.77□□□□□ -1.65
PTPN7-213ENST00000486116 Q5XG85 94 aa4.77□□□□□ -1.65
PTPN7-213ENST00000486116 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
PTPN7-213ENST00000486116 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
PTPN7-213ENST00000486116 SNRPEP62304 92 aaKnown RBP4.76□□□□□ -1.65
PTPN7-213ENST00000486116 CD164Q04900 197 aa4.76□□□□□ -1.65
PTPN7-213ENST00000486116 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
PTPN7-213ENST00000486116 Q75L30 129 aa4.76□□□□□ -1.65
PTPN7-213ENST00000486116 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
PTPN7-213ENST00000486116 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
PTPN7-213ENST00000486116 DDTP30046 118 aa4.75□□□□□ -1.65
PTPN7-213ENST00000486116 CBY1Q9Y3M2 126 aa4.75□□□□□ -1.65
PTPN7-213ENST00000486116 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 TRBV20-1A0A075B6N2 111 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 ZNF815PA8K554 130 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 S100A2P29034 98 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 S100A7L2Q5SY68 101 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 LINC00308Q8TCZ7 52 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 LITAFQ99732 161 aa4.74□□□□□ -1.65
PTPN7-213ENST00000486116 S100A6P06703 90 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 SPRR1BP22528 89 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 Q1RN00 199 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 HIST3H2BBQ8N257 126 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 COPS9Q8WXC6 57 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 SPANXCQ9NY87 97 aa4.73□□□□□ -1.65
PTPN7-213ENST00000486116 SOSTDC1Q6X4U4 206 aa4.72□□□□□ -1.65
PTPN7-213ENST00000486116 Q6ZVH6 145 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms