RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 A6NDN8 102 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 H0Y9J4 135 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 IGLV6-57P01721 117 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 TAL2Q16559 108 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 SOSTDC1Q6X4U4 206 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
SF3A1-208ENST00000485618 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
SF3A1-208ENST00000485618 A6NJY4 79 aa5.06□□□□□ -1.6
SF3A1-208ENST00000485618 VAMP3Q15836 100 aa5.06□□□□□ -1.6
SF3A1-208ENST00000485618 Q8NDZ9 215 aa5.06□□□□□ -1.6
SF3A1-208ENST00000485618 UQCR10Q9UDW1 63 aa5.06□□□□□ -1.6
SF3A1-208ENST00000485618 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
SF3A1-208ENST00000485618 SMIM6P0DI80 62 aa5.05□□□□□ -1.6
SF3A1-208ENST00000485618 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
SF3A1-208ENST00000485618 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
SF3A1-208ENST00000485618 A4D1N5 150 aa5.04□□□□□ -1.6
SF3A1-208ENST00000485618 SNCGO76070 127 aa5.04□□□□□ -1.6
SF3A1-208ENST00000485618 SPRR1AP35321 89 aa5.04□□□□□ -1.6
SF3A1-208ENST00000485618 RAB37Q96AX2 223 aa5.04□□□□□ -1.6
SF3A1-208ENST00000485618 TRBV7-6A0A0J9YX20 115 aa5.03□□□□□ -1.6
SF3A1-208ENST00000485618 EIF4EBP3O60516 100 aaPredicted RBP5.03□□□□□ -1.6
SF3A1-208ENST00000485618 RPL13AP40429 203 aaKnown RBP5.03□□□□□ -1.6
SF3A1-208ENST00000485618 HIGD2AQ9BW72 106 aa5.03□□□□□ -1.6
SF3A1-208ENST00000485618 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
SF3A1-208ENST00000485618 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
SF3A1-208ENST00000485618 B5MCH6 92 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 SLC25A20O43772 301 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 PRLHP81277 87 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 HSD52Q0P140 79 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 Q6ZRX8 168 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 CEND1Q8N111 149 aa5.01□□□□□ -1.61
SF3A1-208ENST00000485618 NHP2Q9NX24 153 aaKnown RBP5.01□□□□□ -1.61
SF3A1-208ENST00000485618 A0A1B0GWB2 263 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
SF3A1-208ENST00000485618 TSTD3H0UI37 97 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 CRYGAP11844 174 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 COX7BP24311 80 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 FAM229BQ4G0N7 80 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 C6orf99Q4VX62 202 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 SMCR5Q8TEV8 140 aa5□□□□□ -1.61
SF3A1-208ENST00000485618 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
SF3A1-208ENST00000485618 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
SF3A1-208ENST00000485618 BVES-AS1Q5T3Y7 98 aa4.99□□□□□ -1.61
SF3A1-208ENST00000485618 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
SF3A1-208ENST00000485618 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
SF3A1-208ENST00000485618 Q1RN00 199 aa4.98□□□□□ -1.61
SF3A1-208ENST00000485618 SMIM11BQ8TCY0 68 aa4.98□□□□□ -1.61
SF3A1-208ENST00000485618 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
SF3A1-208ENST00000485618 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 M0R143 59 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 GHRHP01286 108 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 CFC1BP0CG36 223 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 CFC1P0CG37 223 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 ELOF1P60002 83 aaKnown RBP4.97□□□□□ -1.61
SF3A1-208ENST00000485618 C12orf57Q99622 126 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
SF3A1-208ENST00000485618 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.61
SF3A1-208ENST00000485618 H0YGX0 51 aa4.96□□□□□ -1.62
SF3A1-208ENST00000485618 H7C2G1 150 aa4.96□□□□□ -1.62
SF3A1-208ENST00000485618 COX6CP09669 75 aa4.96□□□□□ -1.62
SF3A1-208ENST00000485618 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
SF3A1-208ENST00000485618 PRO1933Q9H354 126 aa4.96□□□□□ -1.62
SF3A1-208ENST00000485618 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
SF3A1-208ENST00000485618 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 C4orf48Q5BLP8 95 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 GAGE2AQ6NT46 116 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 PRR26Q8N8Z3 221 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 Q9BRP9 147 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
SF3A1-208ENST00000485618 TEX49A0A1B0GTD5 131 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 PSMB2P49721 201 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 FXYD2P54710 66 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
SF3A1-208ENST00000485618 CTAG1AP78358 180 aa4.92□□□□□ -1.62
SF3A1-208ENST00000485618 LINC00575Q6W349 94 aa4.92□□□□□ -1.62
SF3A1-208ENST00000485618 H3BQ85 93 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 ERC2-IT1O76042 136 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 SPAG11AQ6PDA7 123 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 DEFB105AQ8NG35 78 aa4.91□□□□□ -1.62
SF3A1-208ENST00000485618 A0A1B0GX51 115 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 F8WEM9 126 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 SCGB1C2P0DMR2 95 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
SF3A1-208ENST00000485618 PPDPFLQ8WWR9 84 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 ANAPC11Q9NYG5 84 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 LRP2P98164 4655 aa4.9□□□□□ -1.63
SF3A1-208ENST00000485618 A0A087X002 238 aa4.89□□□□□ -1.63
SF3A1-208ENST00000485618 DNAL4O96015 105 aa4.89□□□□□ -1.63
SF3A1-208ENST00000485618 SPRR1BP22528 89 aa4.89□□□□□ -1.63
SF3A1-208ENST00000485618 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
SF3A1-208ENST00000485618 ST20-AS1Q8NBB2 130 aa4.89□□□□□ -1.63
SF3A1-208ENST00000485618 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
SF3A1-208ENST00000485618 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms