RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 KRTDAPP60985 99 aa5.38□□□□□ -1.55
NUP50-215ENST00000484186 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
NUP50-215ENST00000484186 HIST3H2BBQ8N257 126 aa5.38□□□□□ -1.55
NUP50-215ENST00000484186 Q8NBF4 154 aa5.38□□□□□ -1.55
NUP50-215ENST00000484186 LGALS3P17931 250 aaKnown RBP5.37□□□□□ -1.55
NUP50-215ENST00000484186 GAGE2AQ6NT46 116 aa5.37□□□□□ -1.55
NUP50-215ENST00000484186 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
NUP50-215ENST00000484186 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
NUP50-215ENST00000484186 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
NUP50-215ENST00000484186 NDUFC2O95298 119 aa5.36□□□□□ -1.55
NUP50-215ENST00000484186 SPINK1P00995 79 aa5.36□□□□□ -1.55
NUP50-215ENST00000484186 SNRPEP62304 92 aaKnown RBP5.36□□□□□ -1.55
NUP50-215ENST00000484186 MIEN1Q9BRT3 115 aa5.36□□□□□ -1.55
NUP50-215ENST00000484186 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
NUP50-215ENST00000484186 IGLV6-57P01721 117 aa5.35□□□□□ -1.55
NUP50-215ENST00000484186 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
NUP50-215ENST00000484186 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
NUP50-215ENST00000484186 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
NUP50-215ENST00000484186 C5orf52A6NGY3 159 aa5.34□□□□□ -1.55
NUP50-215ENST00000484186 Q6ZRX8 168 aa5.34□□□□□ -1.55
NUP50-215ENST00000484186 Q9BRP9 147 aa5.34□□□□□ -1.55
NUP50-215ENST00000484186 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 A0A0J9YXY3 114 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 NPC2P61916 151 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 MOBPQ13875 183 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 JOSD1Q15040 202 aaPredicted RBP5.33□□□□□ -1.56
NUP50-215ENST00000484186 ADAMTSL4-AS1Q5T5F5 129 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 LCE2AQ5TA79 106 aaPredicted RBP5.33□□□□□ -1.56
NUP50-215ENST00000484186 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
NUP50-215ENST00000484186 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
NUP50-215ENST00000484186 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
NUP50-215ENST00000484186 TIMM17BO60830 172 aa5.32□□□□□ -1.56
NUP50-215ENST00000484186 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
NUP50-215ENST00000484186 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
NUP50-215ENST00000484186 ZNF73O43830 326 aaPredicted RBP5.31□□□□□ -1.56
NUP50-215ENST00000484186 ZNF815PA8K554 130 aa5.3□□□□□ -1.56
NUP50-215ENST00000484186 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
NUP50-215ENST00000484186 Q8N377 158 aa5.3□□□□□ -1.56
NUP50-215ENST00000484186 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
NUP50-215ENST00000484186 HSBP1L1C9JCN9 74 aa5.29□□□□□ -1.56
NUP50-215ENST00000484186 SLC25A20O43772 301 aa5.29□□□□□ -1.56
NUP50-215ENST00000484186 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
NUP50-215ENST00000484186 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
NUP50-215ENST00000484186 LITAFQ99732 161 aa5.29□□□□□ -1.56
NUP50-215ENST00000484186 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 C9orf153Q5TBE3 101 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 Q6ZVH6 145 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 ATOH7Q8N100 152 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 OR13C6PQ8NH95 151 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 SPANXCQ9NY87 97 aa5.28□□□□□ -1.56
NUP50-215ENST00000484186 SCGB1D4Q6XE38 83 aa5.27□□□□□ -1.57
NUP50-215ENST00000484186 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
NUP50-215ENST00000484186 LCE2BO14633 110 aa5.26□□□□□ -1.57
NUP50-215ENST00000484186 SCGB1D1O95968 90 aa5.26□□□□□ -1.57
NUP50-215ENST00000484186 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
NUP50-215ENST00000484186 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
NUP50-215ENST00000484186 IFITM1P13164 125 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 SPRR1BP22528 89 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
NUP50-215ENST00000484186 PCP2Q8IVA1 136 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 LINC00518Q8N0U6 118 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 SPANXDQ9BXN6 97 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
NUP50-215ENST00000484186 SLC25A34Q6PIV7 304 aa5.24□□□□□ -1.57
NUP50-215ENST00000484186 COX7BP24311 80 aa5.23□□□□□ -1.57
NUP50-215ENST00000484186 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
NUP50-215ENST00000484186 DLEU1O43261 78 aa5.22□□□□□ -1.57
NUP50-215ENST00000484186 ELOF1P60002 83 aaKnown RBP5.22□□□□□ -1.57
NUP50-215ENST00000484186 C6orf99Q4VX62 202 aa5.22□□□□□ -1.57
NUP50-215ENST00000484186 XP32Q5T750 250 aa5.22□□□□□ -1.57
NUP50-215ENST00000484186 LAMTOR3Q9UHA4 124 aa5.22□□□□□ -1.57
NUP50-215ENST00000484186 COX8AP10176 69 aa5.21□□□□□ -1.58
NUP50-215ENST00000484186 TAL2Q16559 108 aa5.21□□□□□ -1.58
NUP50-215ENST00000484186 HRCT1Q6UXD1 115 aa5.21□□□□□ -1.58
NUP50-215ENST00000484186 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
NUP50-215ENST00000484186 TRBV7-6A0A0J9YX20 115 aa5.2□□□□□ -1.58
NUP50-215ENST00000484186 TEX49A0A1B0GTD5 131 aa5.19□□□□□ -1.58
NUP50-215ENST00000484186 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
NUP50-215ENST00000484186 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
NUP50-215ENST00000484186 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
NUP50-215ENST00000484186 VAMP8Q9BV40 100 aa5.19□□□□□ -1.58
NUP50-215ENST00000484186 TMA7Q9Y2S6 64 aaKnown RBP5.19□□□□□ -1.58
NUP50-215ENST00000484186 A0A1B0GWB2 263 aa5.18□□□□□ -1.58
NUP50-215ENST00000484186 CD164Q04900 197 aa5.18□□□□□ -1.58
NUP50-215ENST00000484186 Q1RN00 199 aa5.18□□□□□ -1.58
NUP50-215ENST00000484186 PRO1933Q9H354 126 aa5.18□□□□□ -1.58
NUP50-215ENST00000484186 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 A6NDN8 102 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 SPATA45Q537H7 98 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 PYY3Q5JQD4 70 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 HIGD1BQ9P298 99 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 PAM16Q9Y3D7 125 aa5.17□□□□□ -1.58
NUP50-215ENST00000484186 SMIM29Q86T20 159 aa5.16□□□□□ -1.58
NUP50-215ENST00000484186 A4D1N5 150 aa5.15□□□□□ -1.59
NUP50-215ENST00000484186 C9orf92A6NGG3 77 aa5.15□□□□□ -1.59
NUP50-215ENST00000484186 H7C2G1 150 aa5.15□□□□□ -1.59
NUP50-215ENST00000484186 C14orf144Q96I85 54 aa5.15□□□□□ -1.59
NUP50-215ENST00000484186 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
NUP50-215ENST00000484186 Q5XG85 94 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms