RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PSCAO43653 123 aa7.72□□□□□ -1.17
SEC61A1-205ENST00000483956 COX7BP24311 80 aa7.72□□□□□ -1.17
SEC61A1-205ENST00000483956 FN1P02751 2386 aaKnown RBP7.72□□□□□ -1.17
SEC61A1-205ENST00000483956 Q5VV11 94 aa7.72□□□□□ -1.17
SEC61A1-205ENST00000483956 H3BQ85 93 aa7.71□□□□□ -1.17
SEC61A1-205ENST00000483956 IGLV6-57P01721 117 aa7.71□□□□□ -1.17
SEC61A1-205ENST00000483956 ANGP03950 147 aaKnown RBP7.71□□□□□ -1.17
SEC61A1-205ENST00000483956 KLK12Q9UKR0 248 aa7.71□□□□□ -1.17
SEC61A1-205ENST00000483956 OTOGQ6ZRI0 2925 aa7.71□□□□□ -1.18
SEC61A1-205ENST00000483956 UBE2BP63146 152 aa7.71□□□□□ -1.18
SEC61A1-205ENST00000483956 IGLV10-54A0A075B6I4 117 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 A0A0J9YWU9 116 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 IGHV4-30-4P0DP06 118 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 C3orf84H3BNL1 204 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 KRTAP1-1Q07627 177 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 M0R378 163 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
SEC61A1-205ENST00000483956 C16orf90A8MZG2 172 aa7.69□□□□□ -1.18
SEC61A1-205ENST00000483956 LCE6AA0A183 80 aa7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 SPAG11BQ08648 103 aa7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 C11orf45Q8TAV5 145 aa7.68□□□□□ -1.18
SEC61A1-205ENST00000483956 HIVEP2P31629 2446 aa7.67□□□□□ -1.18
SEC61A1-205ENST00000483956 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
SEC61A1-205ENST00000483956 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
SEC61A1-205ENST00000483956 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
SEC61A1-205ENST00000483956 MAST4O15021 2626 aa7.66□□□□□ -1.18
SEC61A1-205ENST00000483956 PDZD2O15018 2839 aa7.66□□□□□ -1.18
SEC61A1-205ENST00000483956 CYP4F30PQ9H0H9 118 aa7.65□□□□□ -1.18
SEC61A1-205ENST00000483956 PRR34Q9NV39 138 aa7.65□□□□□ -1.18
SEC61A1-205ENST00000483956 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.19
SEC61A1-205ENST00000483956 UBE2AP49459 152 aa7.65□□□□□ -1.19
SEC61A1-205ENST00000483956 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.19
SEC61A1-205ENST00000483956 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
SEC61A1-205ENST00000483956 LELP1Q5T871 98 aa7.64□□□□□ -1.19
SEC61A1-205ENST00000483956 F8P00451 2351 aa7.64□□□□□ -1.19
SEC61A1-205ENST00000483956 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
SEC61A1-205ENST00000483956 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
SEC61A1-205ENST00000483956 HCG22E2RYF7 251 aa7.63□□□□□ -1.19
SEC61A1-205ENST00000483956 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
SEC61A1-205ENST00000483956 APOC4P55056 127 aa7.63□□□□□ -1.19
SEC61A1-205ENST00000483956 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
SEC61A1-205ENST00000483956 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
SEC61A1-205ENST00000483956 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
SEC61A1-205ENST00000483956 LCA10Q71F78 164 aa7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 SMR3AQ99954 134 aa7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 DEFB4AO15263 64 aa7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 ELOF1P60002 83 aaKnown RBP7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 C6orf48Q9UBA6 75 aa7.61□□□□□ -1.19
SEC61A1-205ENST00000483956 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
SEC61A1-205ENST00000483956 ATRQ13535 2644 aa7.6□□□□□ -1.19
SEC61A1-205ENST00000483956 Q8NAQ8 132 aa7.6□□□□□ -1.19
SEC61A1-205ENST00000483956 XAGE1AQ9HD64 81 aa7.6□□□□□ -1.19
SEC61A1-205ENST00000483956 A6NN06 94 aa7.6□□□□□ -1.19
SEC61A1-205ENST00000483956 NDUFS5O43920 106 aa7.59□□□□□ -1.19
SEC61A1-205ENST00000483956 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
SEC61A1-205ENST00000483956 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
SEC61A1-205ENST00000483956 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
SEC61A1-205ENST00000483956 SPART-AS1P0CW21 52 aa7.57□□□□□ -1.2
SEC61A1-205ENST00000483956 VPREB1P12018 145 aa7.57□□□□□ -1.2
SEC61A1-205ENST00000483956 B9D2Q9BPU9 175 aa7.56□□□□□ -1.2
SEC61A1-205ENST00000483956 VWFP04275 2813 aa7.55□□□□□ -1.2
SEC61A1-205ENST00000483956 A6NED7 52 aa7.55□□□□□ -1.2
SEC61A1-205ENST00000483956 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
SEC61A1-205ENST00000483956 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
SEC61A1-205ENST00000483956 K7EQZ3 153 aa7.54□□□□□ -1.2
SEC61A1-205ENST00000483956 DEFB105AQ8NG35 78 aa7.54□□□□□ -1.2
SEC61A1-205ENST00000483956 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
SEC61A1-205ENST00000483956 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
SEC61A1-205ENST00000483956 HTN3P15516 51 aa7.53□□□□□ -1.2
SEC61A1-205ENST00000483956 DSCR10P59022 87 aa7.53□□□□□ -1.2
SEC61A1-205ENST00000483956 NDUFB1O75438 58 aa7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 CAMK2N2Q96S95 79 aa7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 KPRPQ5T749 579 aaPredicted RBP7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
SEC61A1-205ENST00000483956 A0A1W2PNM2 257 aa7.51□□□□□ -1.21
SEC61A1-205ENST00000483956 Q75L30 129 aa7.51□□□□□ -1.21
SEC61A1-205ENST00000483956 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
SEC61A1-205ENST00000483956 DEFB116Q30KQ4 102 aa7.5□□□□□ -1.21
SEC61A1-205ENST00000483956 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
SEC61A1-205ENST00000483956 H3BNG1 76 aa7.49□□□□□ -1.21
SEC61A1-205ENST00000483956 Q8N377 158 aa7.49□□□□□ -1.21
SEC61A1-205ENST00000483956 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
SEC61A1-205ENST00000483956 IGLV5-48A0A075B6I7 105 aa7.47□□□□□ -1.21
SEC61A1-205ENST00000483956 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
SEC61A1-205ENST00000483956 MOBPQ13875 183 aa7.47□□□□□ -1.21
SEC61A1-205ENST00000483956 CDC42SE1Q9NRR8 79 aa7.47□□□□□ -1.21
SEC61A1-205ENST00000483956 STAB1Q9NY15 2570 aa7.47□□□□□ -1.21
SEC61A1-205ENST00000483956 MP68P56378 58 aa7.46□□□□□ -1.21
SEC61A1-205ENST00000483956 H3BS24 57 aa7.46□□□□□ -1.22
SEC61A1-205ENST00000483956 LOC101927531A0A1B0GV80 90 aa7.45□□□□□ -1.22
SEC61A1-205ENST00000483956 Q9BRP9 147 aa7.45□□□□□ -1.22
SEC61A1-205ENST00000483956 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
SEC61A1-205ENST00000483956 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
SEC61A1-205ENST00000483956 A0A1B0GW54 56 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms