RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
CDC42SE1-204ENST00000483763 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 NDUFC2-KCTD14E9PQ53 114 aa5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 H3BT86 120 aa5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 CRYGAP11844 174 aa5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 MUC7Q8TAX7 377 aa5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
CDC42SE1-204ENST00000483763 C22orf24Q9Y442 160 aa5.76□□□□□ -1.49
CDC42SE1-204ENST00000483763 TRACP01848 142 aa5.75□□□□□ -1.49
CDC42SE1-204ENST00000483763 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
CDC42SE1-204ENST00000483763 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
CDC42SE1-204ENST00000483763 IGLV6-57P01721 117 aa5.75□□□□□ -1.49
CDC42SE1-204ENST00000483763 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 C6orf99Q4VX62 202 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 S100A7L2Q5SY68 101 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 IMUPQ9GZP8 106 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 VPS13DQ5THJ4 4388 aa5.74□□□□□ -1.49
CDC42SE1-204ENST00000483763 RMI2Q96E14 147 aa5.73□□□□□ -1.49
CDC42SE1-204ENST00000483763 H0YGX0 51 aa5.73□□□□□ -1.49
CDC42SE1-204ENST00000483763 BAALC-AS2P0C853 105 aa5.72□□□□□ -1.49
CDC42SE1-204ENST00000483763 COX7CP15954 63 aa5.72□□□□□ -1.49
CDC42SE1-204ENST00000483763 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
CDC42SE1-204ENST00000483763 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
CDC42SE1-204ENST00000483763 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
CDC42SE1-204ENST00000483763 SDIM1Q6ZPB5 146 aa5.71□□□□□ -1.5
CDC42SE1-204ENST00000483763 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
CDC42SE1-204ENST00000483763 ACYP1P07311 99 aa5.71□□□□□ -1.5
CDC42SE1-204ENST00000483763 TLX1NBP0CAT3 122 aa5.71□□□□□ -1.5
CDC42SE1-204ENST00000483763 NBDYA0A0U1RRE5 68 aa5.7□□□□□ -1.5
CDC42SE1-204ENST00000483763 M0R2N4 97 aa5.7□□□□□ -1.5
CDC42SE1-204ENST00000483763 PSCAO43653 123 aa5.7□□□□□ -1.5
CDC42SE1-204ENST00000483763 Q8N814 137 aa5.7□□□□□ -1.5
CDC42SE1-204ENST00000483763 DNAH2Q9P225 4427 aa5.7□□□□□ -1.5
CDC42SE1-204ENST00000483763 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 DNAL4O96015 105 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 Q6ZRN7 208 aaPredicted RBP5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 C3orf84H3BNL1 204 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 M0R378 163 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
CDC42SE1-204ENST00000483763 hADV29S1A0JD25 119 aa5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 LRCOL1A6NCL2 159 aa5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 PRYO14603 147 aa5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 ZNF73O43830 326 aaPredicted RBP5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 LINC00575Q6W349 94 aa5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
CDC42SE1-204ENST00000483763 LY6G6CO95867 125 aa5.67□□□□□ -1.5
CDC42SE1-204ENST00000483763 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
CDC42SE1-204ENST00000483763 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
CDC42SE1-204ENST00000483763 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
CDC42SE1-204ENST00000483763 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
CDC42SE1-204ENST00000483763 RPL37AP8A6NKH3 93 aa5.66□□□□□ -1.5
CDC42SE1-204ENST00000483763 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
CDC42SE1-204ENST00000483763 DIRC1Q969H9 104 aa5.66□□□□□ -1.5
CDC42SE1-204ENST00000483763 A0A096LNI7 61 aa5.65□□□□□ -1.5
CDC42SE1-204ENST00000483763 ORMDL1Q9P0S3 153 aa5.65□□□□□ -1.5
CDC42SE1-204ENST00000483763 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.51
CDC42SE1-204ENST00000483763 HECTD4Q9Y4D8 3996 aa5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 MRPL55Q7Z7F7 128 aaKnown RBP5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 OBSCN-AS1Q96MR7 158 aa5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
CDC42SE1-204ENST00000483763 EPM2AB3EWF7 344 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.511e-7■□□□□ 9.3
CDC42SE1-204ENST00000483763 Q6ZQY7 126 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 C14orf132Q9NPU4 83 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 COX7BP24311 80 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
CDC42SE1-204ENST00000483763 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 LCE6AA0A183 80 aa5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 Q6ZR54 194 aa5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 ATOX1O00244 68 aa5.62□□□□□ -1.51
CDC42SE1-204ENST00000483763 TRBV7-6A0A0J9YX20 115 aa5.61□□□□□ -1.51
CDC42SE1-204ENST00000483763 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
CDC42SE1-204ENST00000483763 TMEM256-PLSCR3K7ERE1 68 aa5.61□□□□□ -1.51
CDC42SE1-204ENST00000483763 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
CDC42SE1-204ENST00000483763 PANO1I0J062 215 aa5.6□□□□□ -1.51
CDC42SE1-204ENST00000483763 C9orf163Q8N9P6 203 aa5.6□□□□□ -1.51
CDC42SE1-204ENST00000483763 C14orf177Q52M58 125 aa5.6□□□□□ -1.51
CDC42SE1-204ENST00000483763 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
CDC42SE1-204ENST00000483763 A0A087WTM6 91 aa5.59□□□□□ -1.51
CDC42SE1-204ENST00000483763 SPRR1AP35321 89 aa5.59□□□□□ -1.51
CDC42SE1-204ENST00000483763 KRTAP11-1Q8IUC1 163 aa5.59□□□□□ -1.51
CDC42SE1-204ENST00000483763 Q9BRP9 147 aa5.59□□□□□ -1.51
CDC42SE1-204ENST00000483763 INAFM2P0DMQ5 153 aa5.58□□□□□ -1.52
CDC42SE1-204ENST00000483763 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
CDC42SE1-204ENST00000483763 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
CDC42SE1-204ENST00000483763 Q6ZRX8 168 aa5.57□□□□□ -1.52
CDC42SE1-204ENST00000483763 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms