RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
ABCF3-213ENST00000480539 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
ABCF3-213ENST00000480539 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
ABCF3-213ENST00000480539 TNXBP22105 4242 aa9.1□□□□□ -0.95
ABCF3-213ENST00000480539 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
ABCF3-213ENST00000480539 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
ABCF3-213ENST00000480539 DLEU1O43261 78 aa9.08□□□□□ -0.96
ABCF3-213ENST00000480539 PPDPFQ9H3Y8 114 aa9.08□□□□□ -0.96
ABCF3-213ENST00000480539 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
ABCF3-213ENST00000480539 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
ABCF3-213ENST00000480539 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
ABCF3-213ENST00000480539 HERC1Q15751 4861 aa9.07□□□□□ -0.96
ABCF3-213ENST00000480539 B5MCH6 92 aa9.06□□□□□ -0.96
ABCF3-213ENST00000480539 ZNF73O43830 326 aaPredicted RBP9.06□□□□□ -0.96
ABCF3-213ENST00000480539 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
ABCF3-213ENST00000480539 C2orf91Q6ZV80 131 aa9.04□□□□□ -0.96
ABCF3-213ENST00000480539 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
ABCF3-213ENST00000480539 A4D1N5 150 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 A6NDN8 102 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 Q6ZRX8 168 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 CBY1Q9Y3M2 126 aa9.03□□□□□ -0.96
ABCF3-213ENST00000480539 C12orf57Q99622 126 aa9.02□□□□□ -0.97
ABCF3-213ENST00000480539 Q9BRP9 147 aa9.02□□□□□ -0.97
ABCF3-213ENST00000480539 A0A087X002 238 aa9.01□□□□□ -0.97
ABCF3-213ENST00000480539 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
ABCF3-213ENST00000480539 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
ABCF3-213ENST00000480539 C6orf99Q4VX62 202 aa9□□□□□ -0.97
ABCF3-213ENST00000480539 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
ABCF3-213ENST00000480539 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
ABCF3-213ENST00000480539 SPRR4Q96PI1 79 aa8.99□□□□□ -0.97
ABCF3-213ENST00000480539 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
ABCF3-213ENST00000480539 ZNF706Q9Y5V0 76 aaPredicted RBP8.98□□□□□ -0.97
ABCF3-213ENST00000480539 CRYGAP11844 174 aa8.97□□□□□ -0.97
ABCF3-213ENST00000480539 COX7BP24311 80 aa8.96□□□□□ -0.98
ABCF3-213ENST00000480539 ELOF1P60002 83 aaKnown RBP8.96□□□□□ -0.98
ABCF3-213ENST00000480539 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
ABCF3-213ENST00000480539 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
ABCF3-213ENST00000480539 SMIM11BQ8TCY0 68 aa8.96□□□□□ -0.98
ABCF3-213ENST00000480539 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
ABCF3-213ENST00000480539 CEND1Q8N111 149 aa8.93□□□□□ -0.98
ABCF3-213ENST00000480539 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
ABCF3-213ENST00000480539 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
ABCF3-213ENST00000480539 UQCR10Q9UDW1 63 aa8.93□□□□□ -0.98
ABCF3-213ENST00000480539 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
ABCF3-213ENST00000480539 TAL2Q16559 108 aa8.92□□□□□ -0.98
ABCF3-213ENST00000480539 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
ABCF3-213ENST00000480539 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
ABCF3-213ENST00000480539 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
ABCF3-213ENST00000480539 A0A1B0GWB2 263 aa8.91□□□□□ -0.98
ABCF3-213ENST00000480539 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
ABCF3-213ENST00000480539 CFC1P0CG37 223 aa8.91□□□□□ -0.98
ABCF3-213ENST00000480539 FXYD2P54710 66 aa8.91□□□□□ -0.98
ABCF3-213ENST00000480539 LOC105371267A0A1B0GV96 52 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 H7C2G1 150 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 HSD52Q0P140 79 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
ABCF3-213ENST00000480539 TMEM238LA0A1B0GVL6 79 aa8.89□□□□□ -0.99
ABCF3-213ENST00000480539 A6NJY4 79 aa8.89□□□□□ -0.99
ABCF3-213ENST00000480539 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
ABCF3-213ENST00000480539 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
ABCF3-213ENST00000480539 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
ABCF3-213ENST00000480539 NHP2Q9NX24 153 aaKnown RBP8.85□□□□□ -0.99
ABCF3-213ENST00000480539 MOBPQ13875 183 aa8.84□□□□□ -0.99
ABCF3-213ENST00000480539 VAMP3Q15836 100 aa8.84□□□□□ -0.99
ABCF3-213ENST00000480539 Q1RN00 199 aa8.84□□□□□ -0.99
ABCF3-213ENST00000480539 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
ABCF3-213ENST00000480539 K7ERJ3 54 aa8.83□□□□□ -1
ABCF3-213ENST00000480539 TSPAN13O95857 204 aa8.83□□□□□ -1
ABCF3-213ENST00000480539 BVES-AS1Q5T3Y7 98 aa8.82□□□□□ -1
ABCF3-213ENST00000480539 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
ABCF3-213ENST00000480539 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
ABCF3-213ENST00000480539 SLC25A20O43772 301 aa8.81□□□□□ -1
ABCF3-213ENST00000480539 C9orf153Q5TBE3 101 aa8.81□□□□□ -1
ABCF3-213ENST00000480539 LINC00575Q6W349 94 aa8.81□□□□□ -1
ABCF3-213ENST00000480539 Q8NBF4 154 aa8.81□□□□□ -1
ABCF3-213ENST00000480539 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
ABCF3-213ENST00000480539 SPRR1BP22528 89 aa8.8□□□□□ -1
ABCF3-213ENST00000480539 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
ABCF3-213ENST00000480539 TEX49A0A1B0GTD5 131 aa8.77□□□□□ -1.01
ABCF3-213ENST00000480539 hADV29S1A0JD25 119 aa8.77□□□□□ -1.01
ABCF3-213ENST00000480539 Q6ZQY7 126 aa8.77□□□□□ -1.01
ABCF3-213ENST00000480539 IGLV5-48A0A075B6I7 105 aa8.76□□□□□ -1.01
ABCF3-213ENST00000480539 TSTD3H0UI37 97 aa8.76□□□□□ -1.01
ABCF3-213ENST00000480539 TRIAP1O43715 76 aa8.76□□□□□ -1.01
ABCF3-213ENST00000480539 CTAG1AP78358 180 aa8.76□□□□□ -1.01
ABCF3-213ENST00000480539 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
ABCF3-213ENST00000480539 FAM218AQ96MZ4 157 aa8.75□□□□□ -1.01
ABCF3-213ENST00000480539 SSBP3-AS1Q7Z2R9 100 aa8.73□□□□□ -1.01
ABCF3-213ENST00000480539 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
ABCF3-213ENST00000480539 Q8N377 158 aa8.73□□□□□ -1.01
ABCF3-213ENST00000480539 H0YGX0 51 aa8.72□□□□□ -1.01
ABCF3-213ENST00000480539 M0R143 59 aa8.72□□□□□ -1.01
ABCF3-213ENST00000480539 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
ABCF3-213ENST00000480539 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
ABCF3-213ENST00000480539 PSMB2P49721 201 aa8.71□□□□□ -1.02
ABCF3-213ENST00000480539 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms