RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 CXCL6P80162 114 aa9.22□□□□□ -0.93
USP42-206ENST00000479544 EGFEM1PQ0D2K5 195 aa9.21□□□□□ -0.93
USP42-206ENST00000479544 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.93
USP42-206ENST00000479544 KIAA0087Q14695 138 aa9.21□□□□□ -0.94
USP42-206ENST00000479544 H7BZZ5 65 aa9.2□□□□□ -0.94
USP42-206ENST00000479544 IGHV4-30-4P0DP06 118 aa9.2□□□□□ -0.94
USP42-206ENST00000479544 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
USP42-206ENST00000479544 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
USP42-206ENST00000479544 Q6ZTC4 211 aa9.19□□□□□ -0.94
USP42-206ENST00000479544 A0A087WSZ3 146 aa9.19□□□□□ -0.94
USP42-206ENST00000479544 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
USP42-206ENST00000479544 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
USP42-206ENST00000479544 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
USP42-206ENST00000479544 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
USP42-206ENST00000479544 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
USP42-206ENST00000479544 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
USP42-206ENST00000479544 CELSR1Q9NYQ6 3014 aa9.15□□□□□ -0.94
USP42-206ENST00000479544 GIG44P09565 113 aaPredicted RBP9.15□□□□□ -0.94
USP42-206ENST00000479544 MDFIQ99750 246 aa9.14□□□□□ -0.95
USP42-206ENST00000479544 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
USP42-206ENST00000479544 X6R8D5 127 aa9.14□□□□□ -0.95
USP42-206ENST00000479544 LOC110117498A0A087WWA1 95 aa9.13□□□□□ -0.95
USP42-206ENST00000479544 PRLHP81277 87 aa9.13□□□□□ -0.95
USP42-206ENST00000479544 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
USP42-206ENST00000479544 HRNRQ86YZ3 2850 aaPredicted RBP9.13□□□□□ -0.95
USP42-206ENST00000479544 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
USP42-206ENST00000479544 SEC61GP60059 68 aa9.12□□□□□ -0.95
USP42-206ENST00000479544 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
USP42-206ENST00000479544 APCP25054 2843 aa9.12□□□□□ -0.95
USP42-206ENST00000479544 FSHBP01225 129 aa9.11□□□□□ -0.95
USP42-206ENST00000479544 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
USP42-206ENST00000479544 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
USP42-206ENST00000479544 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
USP42-206ENST00000479544 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
USP42-206ENST00000479544 A0A096LNT2 108 aa9.1□□□□□ -0.95
USP42-206ENST00000479544 OXTP01178 125 aa9.1□□□□□ -0.95
USP42-206ENST00000479544 ELOF1P60002 83 aaKnown RBP9.1□□□□□ -0.95
USP42-206ENST00000479544 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
USP42-206ENST00000479544 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
USP42-206ENST00000479544 C16orf95Q9H693 158 aa9.09□□□□□ -0.95
USP42-206ENST00000479544 SPENQ96T58 3664 aaKnown RBP9.09□□□□□ -0.95
USP42-206ENST00000479544 NSD1Q96L73 2696 aaPredicted RBP9.08□□□□□ -0.96
USP42-206ENST00000479544 IGLV6-57P01721 117 aa9.08□□□□□ -0.96
USP42-206ENST00000479544 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
USP42-206ENST00000479544 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
USP42-206ENST00000479544 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
USP42-206ENST00000479544 H0Y9P7 68 aa9.06□□□□□ -0.96
USP42-206ENST00000479544 KRTAP1-3Q8IUG1 177 aa9.06□□□□□ -0.96
USP42-206ENST00000479544 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
USP42-206ENST00000479544 BCE1O60756 84 aa9.05□□□□□ -0.96
USP42-206ENST00000479544 A8MUN3 132 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 Q6ZRP5 223 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 OBSCN-AS1Q96MR7 158 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 VPREB1P12018 145 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
USP42-206ENST00000479544 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
USP42-206ENST00000479544 Q5XG85 94 aa9.03□□□□□ -0.96
USP42-206ENST00000479544 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
USP42-206ENST00000479544 REG3GQ6UW15 175 aa9.02□□□□□ -0.96
USP42-206ENST00000479544 K7EQZ3 153 aa9.02□□□□□ -0.97
USP42-206ENST00000479544 Q8NDZ9 215 aa9.02□□□□□ -0.97
USP42-206ENST00000479544 FAM168BA1KXE4 195 aa9.02□□□□□ -0.97
USP42-206ENST00000479544 Q9BRP9 147 aa9.02□□□□□ -0.97
USP42-206ENST00000479544 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
USP42-206ENST00000479544 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
USP42-206ENST00000479544 Q8NBF4 154 aa8.99□□□□□ -0.97
USP42-206ENST00000479544 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
USP42-206ENST00000479544 C1orf64Q8NEQ6 169 aa8.99□□□□□ -0.97
USP42-206ENST00000479544 MXRA5Q9NR99 2828 aa8.98□□□□□ -0.97
USP42-206ENST00000479544 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
USP42-206ENST00000479544 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
USP42-206ENST00000479544 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
USP42-206ENST00000479544 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
USP42-206ENST00000479544 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
USP42-206ENST00000479544 Q8N377 158 aa8.95□□□□□ -0.98
USP42-206ENST00000479544 Q6ZRX8 168 aa8.95□□□□□ -0.98
USP42-206ENST00000479544 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
USP42-206ENST00000479544 Q8NAQ8 132 aa8.94□□□□□ -0.98
USP42-206ENST00000479544 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
USP42-206ENST00000479544 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
USP42-206ENST00000479544 hDV103S1A0JD37 113 aa8.9□□□□□ -0.98
USP42-206ENST00000479544 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
USP42-206ENST00000479544 NIPBLQ6KC79 2804 aaeCLIP8.89□□□□□ -0.99
USP42-206ENST00000479544 WIPF1O43516 503 aa8.89□□□□□ -0.99
USP42-206ENST00000479544 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
USP42-206ENST00000479544 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
USP42-206ENST00000479544 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
USP42-206ENST00000479544 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
USP42-206ENST00000479544 PRR34Q9NV39 138 aa8.87□□□□□ -0.99
USP42-206ENST00000479544 OTOGQ6ZRI0 2925 aa8.87□□□□□ -0.99
USP42-206ENST00000479544 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
USP42-206ENST00000479544 C15orf56Q8N910 161 aa8.86□□□□□ -0.99
USP42-206ENST00000479544 LINC01556Q5JQF7 62 aa8.86□□□□□ -0.99
USP42-206ENST00000479544 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
USP42-206ENST00000479544 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
USP42-206ENST00000479544 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
USP42-206ENST00000479544 PDZD2O15018 2839 aa8.83□□□□□ -1
USP42-206ENST00000479544 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
USP42-206ENST00000479544 C14orf177Q52M58 125 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms