RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
DDX56-210ENST00000479440 CD164Q04900 197 aa8.52□□□□□ -1.05
DDX56-210ENST00000479440 CBY1Q9Y3M2 126 aa8.52□□□□□ -1.05
DDX56-210ENST00000479440 CFC1P0CG37 223 aa8.51□□□□□ -1.05
DDX56-210ENST00000479440 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
DDX56-210ENST00000479440 IFITM2Q01629 132 aa8.5□□□□□ -1.05
DDX56-210ENST00000479440 SSPOA2VEC9 5147 aa8.5□□□□□ -1.05
DDX56-210ENST00000479440 TRAPPC1Q9Y5R8 145 aa8.49□□□□□ -1.05
DDX56-210ENST00000479440 Q5XG85 94 aa8.48□□□□□ -1.05
DDX56-210ENST00000479440 UQCC3Q6UW78 93 aa8.48□□□□□ -1.05
DDX56-210ENST00000479440 TMEM218A2RU14 115 aa8.47□□□□□ -1.05
DDX56-210ENST00000479440 H7C2G1 150 aa8.47□□□□□ -1.05
DDX56-210ENST00000479440 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
DDX56-210ENST00000479440 PRO1933Q9H354 126 aa8.47□□□□□ -1.05
DDX56-210ENST00000479440 DHRS4-AS1Q9P1J3 65 aa8.47□□□□□ -1.05
DDX56-210ENST00000479440 Q6Q795 121 aa8.46□□□□□ -1.06
DDX56-210ENST00000479440 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
DDX56-210ENST00000479440 LEPROTO15243 131 aa8.45□□□□□ -1.06
DDX56-210ENST00000479440 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
DDX56-210ENST00000479440 NMUP48645 174 aa8.43□□□□□ -1.06
DDX56-210ENST00000479440 RHEBQ15382 184 aa8.43□□□□□ -1.06
DDX56-210ENST00000479440 CLLU1Q5K131 121 aa8.43□□□□□ -1.06
DDX56-210ENST00000479440 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
DDX56-210ENST00000479440 Q1RN00 199 aa8.42□□□□□ -1.06
DDX56-210ENST00000479440 J3QQQ9 107 aa8.41□□□□□ -1.06
DDX56-210ENST00000479440 HERVK_113P61574 105 aa8.41□□□□□ -1.06
DDX56-210ENST00000479440 H0Y8G0 127 aa8.4□□□□□ -1.06
DDX56-210ENST00000479440 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
DDX56-210ENST00000479440 NPC2P61916 151 aa8.4□□□□□ -1.06
DDX56-210ENST00000479440 TAL2Q16559 108 aa8.4□□□□□ -1.06
DDX56-210ENST00000479440 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
DDX56-210ENST00000479440 SMIM29Q86T20 159 aa8.4□□□□□ -1.06
DDX56-210ENST00000479440 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
DDX56-210ENST00000479440 AKR1D1P51857 326 aa8.39□□□□□ -1.07
DDX56-210ENST00000479440 PLNP26678 52 aa8.38□□□□□ -1.07
DDX56-210ENST00000479440 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
DDX56-210ENST00000479440 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
DDX56-210ENST00000479440 ELOF1P60002 83 aaKnown RBP8.37□□□□□ -1.07
DDX56-210ENST00000479440 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
DDX56-210ENST00000479440 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
DDX56-210ENST00000479440 COX7BP24311 80 aa8.35□□□□□ -1.07
DDX56-210ENST00000479440 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
DDX56-210ENST00000479440 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
DDX56-210ENST00000479440 HSBP1O75506 76 aa8.34□□□□□ -1.07
DDX56-210ENST00000479440 TCL1BO95988 128 aa8.34□□□□□ -1.07
DDX56-210ENST00000479440 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
DDX56-210ENST00000479440 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
DDX56-210ENST00000479440 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
DDX56-210ENST00000479440 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
DDX56-210ENST00000479440 DPM2O94777 84 aa8.31□□□□□ -1.08
DDX56-210ENST00000479440 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
DDX56-210ENST00000479440 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
DDX56-210ENST00000479440 C20orf202A1L168 122 aa8.3□□□□□ -1.08
DDX56-210ENST00000479440 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
DDX56-210ENST00000479440 Q75L30 129 aa8.3□□□□□ -1.08
DDX56-210ENST00000479440 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
DDX56-210ENST00000479440 LEPROTL1O95214 131 aa8.29□□□□□ -1.08
DDX56-210ENST00000479440 SYNE2Q8WXH0 6885 aaKnown RBP8.29□□□□□ -1.08
DDX56-210ENST00000479440 A0A0G2JQZ4 141 aa8.28□□□□□ -1.08
DDX56-210ENST00000479440 IGKCP01834 107 aa8.28□□□□□ -1.08
DDX56-210ENST00000479440 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
DDX56-210ENST00000479440 IGLV5-48A0A075B6I7 105 aa8.27□□□□□ -1.09
DDX56-210ENST00000479440 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
DDX56-210ENST00000479440 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
DDX56-210ENST00000479440 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
DDX56-210ENST00000479440 E9PLD3 99 aa8.24□□□□□ -1.09
DDX56-210ENST00000479440 LINC00518Q8N0U6 118 aa8.24□□□□□ -1.09
DDX56-210ENST00000479440 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
DDX56-210ENST00000479440 HSPB8Q9UJY1 196 aa8.24□□□□□ -1.09
DDX56-210ENST00000479440 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
DDX56-210ENST00000479440 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
DDX56-210ENST00000479440 TIMM17BO60830 172 aa8.23□□□□□ -1.09
DDX56-210ENST00000479440 LITAFQ99732 161 aa8.23□□□□□ -1.09
DDX56-210ENST00000479440 F8WEM9 126 aa8.21□□□□□ -1.1
DDX56-210ENST00000479440 MT2AP02795 61 aa8.21□□□□□ -1.1
DDX56-210ENST00000479440 LCE2BO14633 110 aa8.19□□□□□ -1.1
DDX56-210ENST00000479440 LINC00846Q9NV44 126 aa8.18□□□□□ -1.1
DDX56-210ENST00000479440 NHP2Q9NX24 153 aaKnown RBP8.18□□□□□ -1.1
DDX56-210ENST00000479440 SERF1AO75920 110 aa8.17□□□□□ -1.1
DDX56-210ENST00000479440 SNAPINO95295 136 aa8.17□□□□□ -1.1
DDX56-210ENST00000479440 FABP4P15090 132 aa8.17□□□□□ -1.1
DDX56-210ENST00000479440 A4D1N5 150 aa8.16□□□□□ -1.1
DDX56-210ENST00000479440 APOC3P02656 99 aa8.15□□□□□ -1.1
DDX56-210ENST00000479440 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
DDX56-210ENST00000479440 SVBPQ8N300 66 aa8.15□□□□□ -1.1
DDX56-210ENST00000479440 TRBV7-7A0A0K0K1E9 115 aa8.14□□□□□ -1.11
DDX56-210ENST00000479440 MT1FP04733 61 aa8.14□□□□□ -1.11
DDX56-210ENST00000479440 LINC00310P59036 64 aa8.14□□□□□ -1.11
DDX56-210ENST00000479440 Q96NJ1 140 aa8.14□□□□□ -1.11
DDX56-210ENST00000479440 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
DDX56-210ENST00000479440 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
DDX56-210ENST00000479440 Q6JHZ5 121 aa8.13□□□□□ -1.11
DDX56-210ENST00000479440 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
DDX56-210ENST00000479440 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 A6NDN8 102 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
DDX56-210ENST00000479440 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms