RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 CHMP4BQ9H444 224 aaKnown RBP-1.59□□□□□ -2.66
CALD1-218ENST00000478075 CALML5Q9NZT1 146 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 NRXN3Q9Y4C0 1643 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 SPEF2Q9C093 1822 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 ZC3H13Q5T200 1668 aaKnown RBP-1.6□□□□□ -2.67
CALD1-218ENST00000478075 CD163L1Q9NR16 1453 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 C7orf77A4D0Y5 90 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 TRPC5OSA6NMA1 111 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 NDUFC1O43677 76 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 PAEPP09466 180 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 SFTA3P0C7M3 94 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 IGLC2P0DOY2 106 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 IGLC3P0DOY3 106 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 BVES-AS1Q5T3Y7 98 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 OR9Q1Q8NGQ5 310 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 PSMG3Q9BT73 122 aaPredicted RBP-1.6□□□□□ -2.67
CALD1-218ENST00000478075 C9orf16Q9BUW7 83 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 MAP3K4Q9Y6R4 1608 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 DOT1LQ8TEK3 1739 aa-1.6□□□□□ -2.67
CALD1-218ENST00000478075 CENPFP49454 3210 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 TCHHQ07283 1943 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 C20orf202A1L168 122 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 DPM2O94777 84 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 ATG12O94817 140 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 TNFSF15O95150 251 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 DEXIO95424 95 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 TRAPPC2P0DI81 140 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 TRAPPC2BP0DI82 140 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 POLR2HP52434 150 aaKnown RBP-1.61□□□□□ -2.67
CALD1-218ENST00000478075 RGS21Q2M5E4 152 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 SMIM21Q3B7S5 101 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 CCDC122Q5T0U0 273 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 DYDC1Q8WWB3 177 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 CFAP53Q96M91 514 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 CCDC115Q96NT0 180 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 LINC00474Q9P2X8 69 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 NEXMIFQ5QGS0 1516 aa-1.61□□□□□ -2.67
CALD1-218ENST00000478075 KIF14Q15058 1648 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 RGPD1P0DJD0 1748 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 ITSN1Q15811 1721 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 DDX60LQ5H9U9 1706 aaKnown RBP-1.62□□□□□ -2.67
CALD1-218ENST00000478075 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.62□□□□□ -2.67
CALD1-218ENST00000478075 OVOS2A0A0G2JMS6 1433 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 CPSF1Q10570 1443 aaKnown RBP-1.62□□□□□ -2.67
CALD1-218ENST00000478075 PIGBOS1A0A0B4J2F0 54 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 MRPS10P82664 201 aaKnown RBP-1.62□□□□□ -2.67
CALD1-218ENST00000478075 REEP5Q00765 189 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 HIST1H1AQ02539 215 aaPredicted RBP-1.62□□□□□ -2.67
CALD1-218ENST00000478075 Q0VG73 95 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 TMEM244Q5VVB8 128 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 TCTE3Q8IZS6 198 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 ARL11Q969Q4 196 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 MANBALQ9NQG1 85 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 SAR1AQ9NR31 198 aa-1.62□□□□□ -2.67
CALD1-218ENST00000478075 SCAPERQ9BY12 1400 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 DNAH12Q6ZR08 3092 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 COX6CP09669 75 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 CCDC172P0C7W6 258 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 CCDC58Q4VC31 144 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 Q56UQ5 140 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 FAM24BQ8N5W8 94 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 THEM6Q8WUY1 208 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 GAFA1Q96PS6 74 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 C12orf57Q99622 126 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 LLPHQ9BRT6 129 aaKnown RBP-1.63□□□□□ -2.67
CALD1-218ENST00000478075 VAMP8Q9BV40 100 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 CLASP1Q7Z460 1538 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 PREX2Q70Z35 1606 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 ANKRD36BQ8N2N9 1353 aa-1.63□□□□□ -2.67
CALD1-218ENST00000478075 MAGOHP61326 146 aaKnown RBP-1.64□□□□□ -2.67
CALD1-218ENST00000478075 NCS1P62166 190 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 MINOS1Q5TGZ0 78 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 OR13C6PQ8NH95 151 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 MAGOHBQ96A72 148 aaKnown RBP-1.64□□□□□ -2.67
CALD1-218ENST00000478075 CCDC42Q96M95 316 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 ARL2BPQ9Y2Y0 163 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 TJP1Q07157 1748 aa-1.64□□□□□ -2.67
CALD1-218ENST00000478075 TRAV21A0A0B4J279 112 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 TMEM218A2RU14 115 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 SMIM23A6NLE4 172 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 FCER1GP30273 86 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 LSM6P62312 80 aaKnown RBP-1.65□□□□□ -2.67
CALD1-218ENST00000478075 C12orf73Q69YU5 71 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 FAM9CQ8IZT9 166 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 SMIM20Q8N5G0 67 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 KCNRGQ8N5I3 272 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.65□□□□□ -2.67
CALD1-218ENST00000478075 ANP32BQ92688 251 aaKnown RBP-1.65□□□□□ -2.67
CALD1-218ENST00000478075 CCDC32Q9BV29 185 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 SPANXDQ9BXN6 97 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 BOLA2Q9H3K6 86 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 PRO1854Q9UHT4 67 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 PPLO60437 1756 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 CDK5RAP2Q96SN8 1893 aa-1.65□□□□□ -2.67
CALD1-218ENST00000478075 CC2D2AQ9P2K1 1620 aa-1.66□□□□□ -2.67
CALD1-218ENST00000478075 CHD1O14646 1710 aa-1.66□□□□□ -2.67
CALD1-218ENST00000478075 CCNB3Q8WWL7 1395 aa-1.66□□□□□ -2.68
CALD1-218ENST00000478075 IQCF6A8MYZ5 107 aa-1.66□□□□□ -2.68
CALD1-218ENST00000478075 GNG3P63215 75 aa-1.66□□□□□ -2.68
CALD1-218ENST00000478075 LSM10Q969L4 123 aaKnown RBP-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms