RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
PDLIM1-202ENST00000477757 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
PDLIM1-202ENST00000477757 MACF1Q9UPN3 7388 aaKnown RBP10.6□□□□□ -0.71
PDLIM1-202ENST00000477757 NDUFC2O95298 119 aa10.6□□□□□ -0.71
PDLIM1-202ENST00000477757 Q5XG85 94 aa10.6□□□□□ -0.71
PDLIM1-202ENST00000477757 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
PDLIM1-202ENST00000477757 KRTAP9-8Q9BYQ0 159 aa10.59□□□□□ -0.71
PDLIM1-202ENST00000477757 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
PDLIM1-202ENST00000477757 LAMTOR3Q9UHA4 124 aa10.58□□□□□ -0.72
PDLIM1-202ENST00000477757 TSPEAR-AS2P59090 65 aa10.56□□□□□ -0.72
PDLIM1-202ENST00000477757 H7C2G1 150 aa10.55□□□□□ -0.72
PDLIM1-202ENST00000477757 Q6Q795 121 aa10.55□□□□□ -0.72
PDLIM1-202ENST00000477757 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
PDLIM1-202ENST00000477757 SYNE2Q8WXH0 6885 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-202ENST00000477757 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
PDLIM1-202ENST00000477757 RPS10P5Q9NQ39 176 aa10.54□□□□□ -0.72
PDLIM1-202ENST00000477757 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
PDLIM1-202ENST00000477757 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
PDLIM1-202ENST00000477757 IFITM2Q01629 132 aa10.52□□□□□ -0.73
PDLIM1-202ENST00000477757 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.73
PDLIM1-202ENST00000477757 KRTAP19-1Q8IUB9 90 aa10.51□□□□□ -0.73
PDLIM1-202ENST00000477757 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
PDLIM1-202ENST00000477757 CBY1Q9Y3M2 126 aa10.5□□□□□ -0.73
PDLIM1-202ENST00000477757 TMEM218A2RU14 115 aa10.49□□□□□ -0.73
PDLIM1-202ENST00000477757 Q1RN00 199 aa10.49□□□□□ -0.73
PDLIM1-202ENST00000477757 TRAPPC1Q9Y5R8 145 aa10.49□□□□□ -0.73
PDLIM1-202ENST00000477757 LEPROTO15243 131 aa10.48□□□□□ -0.73
PDLIM1-202ENST00000477757 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
PDLIM1-202ENST00000477757 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
PDLIM1-202ENST00000477757 J3QQQ9 107 aa10.45□□□□□ -0.74
PDLIM1-202ENST00000477757 UQCC3Q6UW78 93 aa10.45□□□□□ -0.74
PDLIM1-202ENST00000477757 NMUP48645 174 aa10.44□□□□□ -0.74
PDLIM1-202ENST00000477757 AKR1D1P51857 326 aa10.44□□□□□ -0.74
PDLIM1-202ENST00000477757 NPC2P61916 151 aa10.43□□□□□ -0.74
PDLIM1-202ENST00000477757 CHCHD1Q96BP2 118 aaKnown RBP10.43□□□□□ -0.74
PDLIM1-202ENST00000477757 TAL2Q16559 108 aa10.42□□□□□ -0.74
PDLIM1-202ENST00000477757 TEX49A0A1B0GTD5 131 aa10.41□□□□□ -0.74
PDLIM1-202ENST00000477757 ELOF1P60002 83 aaKnown RBP10.41□□□□□ -0.74
PDLIM1-202ENST00000477757 RHEBQ15382 184 aa10.41□□□□□ -0.74
PDLIM1-202ENST00000477757 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
PDLIM1-202ENST00000477757 LCE2BO14633 110 aa10.4□□□□□ -0.74
PDLIM1-202ENST00000477757 DEFB105AQ8NG35 78 aa10.4□□□□□ -0.74
PDLIM1-202ENST00000477757 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
PDLIM1-202ENST00000477757 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
PDLIM1-202ENST00000477757 H0Y8G0 127 aa10.38□□□□□ -0.75
PDLIM1-202ENST00000477757 MT2AP02795 61 aa10.38□□□□□ -0.75
PDLIM1-202ENST00000477757 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
PDLIM1-202ENST00000477757 ATP11AUNQ6ZP68 121 aa10.38□□□□□ -0.75
PDLIM1-202ENST00000477757 COX7BP24311 80 aa10.37□□□□□ -0.75
PDLIM1-202ENST00000477757 PLNP26678 52 aa10.37□□□□□ -0.75
PDLIM1-202ENST00000477757 TCL1BO95988 128 aa10.36□□□□□ -0.75
PDLIM1-202ENST00000477757 HERVK_113P61574 105 aa10.36□□□□□ -0.75
PDLIM1-202ENST00000477757 Q75L30 129 aa10.36□□□□□ -0.75
PDLIM1-202ENST00000477757 OR13C6PQ8NH95 151 aa10.36□□□□□ -0.75
PDLIM1-202ENST00000477757 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
PDLIM1-202ENST00000477757 C20orf202A1L168 122 aa10.35□□□□□ -0.75
PDLIM1-202ENST00000477757 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
PDLIM1-202ENST00000477757 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
PDLIM1-202ENST00000477757 C6orf99Q4VX62 202 aa10.33□□□□□ -0.76
PDLIM1-202ENST00000477757 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
PDLIM1-202ENST00000477757 C10orf91Q5T1B1 145 aa10.31□□□□□ -0.76
PDLIM1-202ENST00000477757 HSBP1O75506 76 aa10.3□□□□□ -0.76
PDLIM1-202ENST00000477757 MT1FP04733 61 aa10.3□□□□□ -0.76
PDLIM1-202ENST00000477757 LINC00308Q8TCZ7 52 aa10.3□□□□□ -0.76
PDLIM1-202ENST00000477757 DPM2O94777 84 aa10.29□□□□□ -0.76
PDLIM1-202ENST00000477757 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
PDLIM1-202ENST00000477757 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
PDLIM1-202ENST00000477757 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
PDLIM1-202ENST00000477757 LITAFQ99732 161 aa10.27□□□□□ -0.77
PDLIM1-202ENST00000477757 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
PDLIM1-202ENST00000477757 PMCHL2Q9BQD1 86 aa10.25□□□□□ -0.77
PDLIM1-202ENST00000477757 LEPROTL1O95214 131 aa10.24□□□□□ -0.77
PDLIM1-202ENST00000477757 IGKCP01834 107 aa10.24□□□□□ -0.77
PDLIM1-202ENST00000477757 TRBV20-1A0A075B6N2 111 aa10.21□□□□□ -0.77
PDLIM1-202ENST00000477757 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
PDLIM1-202ENST00000477757 E9PLD3 99 aa10.2□□□□□ -0.78
PDLIM1-202ENST00000477757 TIMM17BO60830 172 aa10.2□□□□□ -0.78
PDLIM1-202ENST00000477757 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
PDLIM1-202ENST00000477757 KRTAP10-10P60014 251 aa10.19□□□□□ -0.78
PDLIM1-202ENST00000477757 LINC00846Q9NV44 126 aa10.19□□□□□ -0.78
PDLIM1-202ENST00000477757 LINC00310P59036 64 aa10.16□□□□□ -0.78
PDLIM1-202ENST00000477757 KRTAP19-6Q3LI70 58 aa10.16□□□□□ -0.78
PDLIM1-202ENST00000477757 HSPB8Q9UJY1 196 aa10.16□□□□□ -0.78
PDLIM1-202ENST00000477757 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
PDLIM1-202ENST00000477757 F8WEM9 126 aa10.14□□□□□ -0.79
PDLIM1-202ENST00000477757 Q96NJ1 140 aa10.14□□□□□ -0.79
PDLIM1-202ENST00000477757 C20orf166-AS1Q96NR2 134 aa10.14□□□□□ -0.79
PDLIM1-202ENST00000477757 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
PDLIM1-202ENST00000477757 SERF1AO75920 110 aa10.12□□□□□ -0.79
PDLIM1-202ENST00000477757 A4D1N5 150 aa10.11□□□□□ -0.79
PDLIM1-202ENST00000477757 FABP4P15090 132 aa10.11□□□□□ -0.79
PDLIM1-202ENST00000477757 KRTAP6-3Q3LI67 103 aa10.11□□□□□ -0.79
PDLIM1-202ENST00000477757 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
PDLIM1-202ENST00000477757 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
PDLIM1-202ENST00000477757 A8MUU9 505 aa10.1□□□□□ -0.79
PDLIM1-202ENST00000477757 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
PDLIM1-202ENST00000477757 Q6JHZ5 121 aa10.09□□□□□ -0.79
PDLIM1-202ENST00000477757 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
PDLIM1-202ENST00000477757 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
PDLIM1-202ENST00000477757 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms