RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
LSM2-212ENST00000477182 LINC00167Q96N53 147 aa7.16□□□□□ -1.26
LSM2-212ENST00000477182 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
LSM2-212ENST00000477182 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
LSM2-212ENST00000477182 DDTP30046 118 aa7.15□□□□□ -1.26
LSM2-212ENST00000477182 FXYD2P54710 66 aa7.15□□□□□ -1.26
LSM2-212ENST00000477182 LBHQ53QV2 105 aaPredicted RBP7.15□□□□□ -1.26
LSM2-212ENST00000477182 UBE2BP63146 152 aa7.14□□□□□ -1.27
LSM2-212ENST00000477182 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
LSM2-212ENST00000477182 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
LSM2-212ENST00000477182 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
LSM2-212ENST00000477182 S100A7L2Q5SY68 101 aa7.13□□□□□ -1.27
LSM2-212ENST00000477182 KRTAP11-1Q8IUC1 163 aa7.13□□□□□ -1.27
LSM2-212ENST00000477182 OR13C6PQ8NH95 151 aa7.13□□□□□ -1.27
LSM2-212ENST00000477182 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 A6NDN8 102 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 A6NJY4 79 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 CFC1BP0CG36 223 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 CFC1P0CG37 223 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
LSM2-212ENST00000477182 MUC2Q02817 5179 aa7.11□□□□□ -1.27
LSM2-212ENST00000477182 PCP4L1A6NKN8 68 aa7.11□□□□□ -1.27
LSM2-212ENST00000477182 M0R143 59 aa7.11□□□□□ -1.27
LSM2-212ENST00000477182 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
LSM2-212ENST00000477182 TRAV13-2A0A0B4J235 113 aa7.1□□□□□ -1.27
LSM2-212ENST00000477182 RAB37Q96AX2 223 aa7.1□□□□□ -1.27
LSM2-212ENST00000477182 NHP2Q9NX24 153 aaKnown RBP7.1□□□□□ -1.27
LSM2-212ENST00000477182 LPAP08519 4548 aa7.09□□□□□ -1.27
LSM2-212ENST00000477182 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
LSM2-212ENST00000477182 K7ERJ3 54 aa7.09□□□□□ -1.27
LSM2-212ENST00000477182 RPL13AP40429 203 aaKnown RBP7.09□□□□□ -1.27
LSM2-212ENST00000477182 TMEM126AQ9H061 195 aa7.09□□□□□ -1.27
LSM2-212ENST00000477182 PSORS1C2Q9UIG4 136 aa7.09□□□□□ -1.27
LSM2-212ENST00000477182 PRYO14603 147 aa7.08□□□□□ -1.28
LSM2-212ENST00000477182 BATFQ16520 125 aa7.08□□□□□ -1.28
LSM2-212ENST00000477182 TRAV23DV6A0A075B6W5 121 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 H7C2G1 150 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 REG3GQ6UW15 175 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 KCNQ1DNQ9H478 68 aa7.07□□□□□ -1.28
LSM2-212ENST00000477182 SMIM11BQ8TCY0 68 aa7.06□□□□□ -1.28
LSM2-212ENST00000477182 PRO1854Q9UHT4 67 aa7.06□□□□□ -1.28
LSM2-212ENST00000477182 C1orf137Q5JT78 98 aa7.05□□□□□ -1.28
LSM2-212ENST00000477182 CBY1Q9Y3M2 126 aa7.05□□□□□ -1.28
LSM2-212ENST00000477182 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
LSM2-212ENST00000477182 BCE1O60756 84 aa7.04□□□□□ -1.28
LSM2-212ENST00000477182 SPRR1AP35321 89 aa7.04□□□□□ -1.28
LSM2-212ENST00000477182 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 Q1RN00 199 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
LSM2-212ENST00000477182 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 DIRC1Q969H9 104 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
LSM2-212ENST00000477182 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
LSM2-212ENST00000477182 TSPAN13O95857 204 aa7.01□□□□□ -1.29
LSM2-212ENST00000477182 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
LSM2-212ENST00000477182 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
LSM2-212ENST00000477182 UBE2AP49459 152 aa7.01□□□□□ -1.29
LSM2-212ENST00000477182 PRLHP81277 87 aa7.01□□□□□ -1.29
LSM2-212ENST00000477182 B5MCH6 92 aa7□□□□□ -1.29
LSM2-212ENST00000477182 COX7BP24311 80 aa6.99□□□□□ -1.29
LSM2-212ENST00000477182 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
LSM2-212ENST00000477182 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
LSM2-212ENST00000477182 TRIAP1O43715 76 aa6.98□□□□□ -1.29
LSM2-212ENST00000477182 PSMB2P49721 201 aa6.98□□□□□ -1.29
LSM2-212ENST00000477182 ELOF1P60002 83 aaKnown RBP6.98□□□□□ -1.29
LSM2-212ENST00000477182 Q6ZRX8 168 aa6.98□□□□□ -1.29
LSM2-212ENST00000477182 NAA38Q9BRA0 125 aaKnown RBP6.98□□□□□ -1.29
LSM2-212ENST00000477182 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
LSM2-212ENST00000477182 ZNF861PO60384 105 aa6.97□□□□□ -1.29
LSM2-212ENST00000477182 VAMP3Q15836 100 aa6.97□□□□□ -1.29
LSM2-212ENST00000477182 HIGD2AQ9BW72 106 aa6.97□□□□□ -1.29
LSM2-212ENST00000477182 H0Y9J4 135 aa6.96□□□□□ -1.3
LSM2-212ENST00000477182 Q9BRP9 147 aa6.96□□□□□ -1.3
LSM2-212ENST00000477182 TAX1BP3O14907 124 aa6.95□□□□□ -1.3
LSM2-212ENST00000477182 COL5A1-AS1Q5SY13 56 aa6.95□□□□□ -1.3
LSM2-212ENST00000477182 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
LSM2-212ENST00000477182 ERC2-IT1O76042 136 aa6.94□□□□□ -1.3
LSM2-212ENST00000477182 H0YGX0 51 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 H3BUT2 72 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 COX6CP09669 75 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 CLEC2BQ92478 149 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
LSM2-212ENST00000477182 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
LSM2-212ENST00000477182 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
LSM2-212ENST00000477182 FAM218AQ96MZ4 157 aa6.92□□□□□ -1.3
LSM2-212ENST00000477182 SLC25A20O43772 301 aa6.91□□□□□ -1.3
LSM2-212ENST00000477182 CRCT1Q9UGL9 99 aa6.9□□□□□ -1.3
LSM2-212ENST00000477182 hADV29S1A0JD25 119 aa6.89□□□□□ -1.31
LSM2-212ENST00000477182 ST20-AS1Q8NBB2 130 aa6.89□□□□□ -1.31
LSM2-212ENST00000477182 A0A1W2PPM0 123 aa6.87□□□□□ -1.31
LSM2-212ENST00000477182 SNCGO76070 127 aa6.87□□□□□ -1.31
LSM2-212ENST00000477182 LYRM7Q5U5X0 104 aa6.87□□□□□ -1.31
LSM2-212ENST00000477182 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
LSM2-212ENST00000477182 A0A1B0GX51 115 aa6.86□□□□□ -1.31
LSM2-212ENST00000477182 TCL1BO95988 128 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms