RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TMEM223A0PJW6 202 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 AKR1D1P51857 326 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
HDAC6-219ENST00000476625 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
HDAC6-219ENST00000476625 S100A6P06703 90 aa6.48□□□□□ -1.37
HDAC6-219ENST00000476625 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
HDAC6-219ENST00000476625 MAP1LC3CQ9BXW4 147 aa6.48□□□□□ -1.37
HDAC6-219ENST00000476625 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
HDAC6-219ENST00000476625 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
HDAC6-219ENST00000476625 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
HDAC6-219ENST00000476625 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
HDAC6-219ENST00000476625 SFTA2Q6UW10 78 aa6.45□□□□□ -1.38
HDAC6-219ENST00000476625 Q6ZRX8 168 aa6.45□□□□□ -1.38
HDAC6-219ENST00000476625 M0R2T5 61 aa6.44□□□□□ -1.38
HDAC6-219ENST00000476625 PLNP26678 52 aa6.44□□□□□ -1.38
HDAC6-219ENST00000476625 S100A2P29034 98 aa6.44□□□□□ -1.38
HDAC6-219ENST00000476625 DDTP30046 118 aa6.44□□□□□ -1.38
HDAC6-219ENST00000476625 LINC00310P59036 64 aa6.44□□□□□ -1.38
HDAC6-219ENST00000476625 FABP4P15090 132 aa6.43□□□□□ -1.38
HDAC6-219ENST00000476625 PET117Q6UWS5 81 aa6.43□□□□□ -1.38
HDAC6-219ENST00000476625 C20orf202A1L168 122 aa6.42□□□□□ -1.38
HDAC6-219ENST00000476625 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-219ENST00000476625 DPM2O94777 84 aa6.41□□□□□ -1.38
HDAC6-219ENST00000476625 GHRHP01286 108 aa6.41□□□□□ -1.38
HDAC6-219ENST00000476625 NPC2P61916 151 aa6.41□□□□□ -1.38
HDAC6-219ENST00000476625 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
HDAC6-219ENST00000476625 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-219ENST00000476625 SYS1-DBNDD2H3BUS1 97 aa6.4□□□□□ -1.38
HDAC6-219ENST00000476625 HERVK_113P61574 105 aa6.4□□□□□ -1.38
HDAC6-219ENST00000476625 LINC00587B1AMM8 73 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 H0Y8G0 127 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 H7C2G1 150 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 IGLV6-57P01721 117 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 IGKCP01834 107 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
HDAC6-219ENST00000476625 TRAV23DV6A0A075B6W5 121 aa6.38□□□□□ -1.39
HDAC6-219ENST00000476625 A0A0G2JQZ4 141 aa6.38□□□□□ -1.39
HDAC6-219ENST00000476625 SNRPEP62304 92 aaKnown RBP6.38□□□□□ -1.39
HDAC6-219ENST00000476625 HERV-K104P63124 156 aa6.38□□□□□ -1.39
HDAC6-219ENST00000476625 LINC01545Q5VT33 79 aa6.38□□□□□ -1.39
HDAC6-219ENST00000476625 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
HDAC6-219ENST00000476625 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 MYMXA0A1B0GTQ4 84 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 C5orf52A6NGY3 159 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 C3orf79P0CE67 100 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 KRTDAPP60985 99 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 S100A12P80511 92 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
HDAC6-219ENST00000476625 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-219ENST00000476625 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
HDAC6-219ENST00000476625 NMUP48645 174 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
HDAC6-219ENST00000476625 LEPROTO15243 131 aa6.34□□□□□ -1.39
HDAC6-219ENST00000476625 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
HDAC6-219ENST00000476625 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
HDAC6-219ENST00000476625 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
HDAC6-219ENST00000476625 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
HDAC6-219ENST00000476625 USH2AO75445 5202 aa6.32□□□□□ -1.4
HDAC6-219ENST00000476625 Q1RN00 199 aa6.32□□□□□ -1.4
HDAC6-219ENST00000476625 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
HDAC6-219ENST00000476625 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
HDAC6-219ENST00000476625 E9PLD3 99 aa6.31□□□□□ -1.4
HDAC6-219ENST00000476625 LGALS3P17931 250 aaKnown RBP6.31□□□□□ -1.4
HDAC6-219ENST00000476625 SPRR1BP22528 89 aa6.31□□□□□ -1.4
HDAC6-219ENST00000476625 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-219ENST00000476625 J3QQQ9 107 aa6.3□□□□□ -1.4
HDAC6-219ENST00000476625 C1orf195Q5TG92 126 aa6.3□□□□□ -1.4
HDAC6-219ENST00000476625 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
HDAC6-219ENST00000476625 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
HDAC6-219ENST00000476625 NDUFC2O95298 119 aa6.29□□□□□ -1.4
HDAC6-219ENST00000476625 SCGB1D1O95968 90 aa6.28□□□□□ -1.4
HDAC6-219ENST00000476625 Q6Q795 121 aa6.28□□□□□ -1.4
HDAC6-219ENST00000476625 A0A0J9YXY3 114 aa6.27□□□□□ -1.41
HDAC6-219ENST00000476625 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
HDAC6-219ENST00000476625 OR13C6PQ8NH95 151 aa6.26□□□□□ -1.41
HDAC6-219ENST00000476625 COPS9Q8WXC6 57 aa6.26□□□□□ -1.41
HDAC6-219ENST00000476625 TIMM17BO60830 172 aa6.25□□□□□ -1.41
HDAC6-219ENST00000476625 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
HDAC6-219ENST00000476625 Q6ZVH6 145 aa6.24□□□□□ -1.41
HDAC6-219ENST00000476625 ZNF815PA8K554 130 aa6.23□□□□□ -1.41
HDAC6-219ENST00000476625 TAL2Q16559 108 aa6.23□□□□□ -1.41
HDAC6-219ENST00000476625 LITAFQ99732 161 aa6.23□□□□□ -1.41
HDAC6-219ENST00000476625 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
HDAC6-219ENST00000476625 PRO1933Q9H354 126 aa6.23□□□□□ -1.41
HDAC6-219ENST00000476625 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
HDAC6-219ENST00000476625 LOC105371267A0A1B0GV96 52 aa6.22□□□□□ -1.41
HDAC6-219ENST00000476625 COX7BP24311 80 aa6.22□□□□□ -1.41
HDAC6-219ENST00000476625 CD164Q04900 197 aa6.22□□□□□ -1.41
HDAC6-219ENST00000476625 C6orf99Q4VX62 202 aa6.22□□□□□ -1.41
HDAC6-219ENST00000476625 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
HDAC6-219ENST00000476625 HINT1P49773 126 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-219ENST00000476625 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
HDAC6-219ENST00000476625 SLC25A34Q6PIV7 304 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms