RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
ATG9A-220ENST00000475339 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
ATG9A-220ENST00000475339 ETDCA0A1B0GVM5 59 aa8.22□□□□□ -1.09
ATG9A-220ENST00000475339 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
ATG9A-220ENST00000475339 LITAFQ99732 161 aa8.22□□□□□ -1.09
ATG9A-220ENST00000475339 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
ATG9A-220ENST00000475339 KCNQ1DNQ9H478 68 aa8.22□□□□□ -1.09
ATG9A-220ENST00000475339 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
ATG9A-220ENST00000475339 SCGB1D1O95968 90 aa8.21□□□□□ -1.1
ATG9A-220ENST00000475339 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
ATG9A-220ENST00000475339 SPANXCQ9NY87 97 aa8.21□□□□□ -1.1
ATG9A-220ENST00000475339 PCP2Q8IVA1 136 aa8.2□□□□□ -1.1
ATG9A-220ENST00000475339 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
ATG9A-220ENST00000475339 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
ATG9A-220ENST00000475339 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
ATG9A-220ENST00000475339 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
ATG9A-220ENST00000475339 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
ATG9A-220ENST00000475339 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
ATG9A-220ENST00000475339 CRYGAP11844 174 aa8.18□□□□□ -1.1
ATG9A-220ENST00000475339 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
ATG9A-220ENST00000475339 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
ATG9A-220ENST00000475339 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
ATG9A-220ENST00000475339 SPRR1AP35321 89 aa8.17□□□□□ -1.1
ATG9A-220ENST00000475339 Q6ZVH6 145 aa8.16□□□□□ -1.1
ATG9A-220ENST00000475339 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
ATG9A-220ENST00000475339 IFITM1P13164 125 aa8.15□□□□□ -1.1
ATG9A-220ENST00000475339 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
ATG9A-220ENST00000475339 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
ATG9A-220ENST00000475339 ANAPC11Q9NYG5 84 aa8.15□□□□□ -1.1
ATG9A-220ENST00000475339 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
ATG9A-220ENST00000475339 KRTAP4-16G5E9R7 235 aaPredicted RBP8.14□□□□□ -1.11
ATG9A-220ENST00000475339 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
ATG9A-220ENST00000475339 A0A087X002 238 aa8.13□□□□□ -1.11
ATG9A-220ENST00000475339 B5MCH6 92 aa8.13□□□□□ -1.11
ATG9A-220ENST00000475339 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
ATG9A-220ENST00000475339 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
ATG9A-220ENST00000475339 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
ATG9A-220ENST00000475339 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
ATG9A-220ENST00000475339 Q6ZRX8 168 aa8.11□□□□□ -1.11
ATG9A-220ENST00000475339 MUSTN1Q8IVN3 82 aa8.11□□□□□ -1.11
ATG9A-220ENST00000475339 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
ATG9A-220ENST00000475339 SPRR4Q96PI1 79 aa8.11□□□□□ -1.11
ATG9A-220ENST00000475339 PPDPFQ9H3Y8 114 aa8.11□□□□□ -1.11
ATG9A-220ENST00000475339 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
ATG9A-220ENST00000475339 A6NDN8 102 aa8.09□□□□□ -1.11
ATG9A-220ENST00000475339 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
ATG9A-220ENST00000475339 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
ATG9A-220ENST00000475339 PAM16Q9Y3D7 125 aa8.08□□□□□ -1.12
ATG9A-220ENST00000475339 COX8AP10176 69 aa8.07□□□□□ -1.12
ATG9A-220ENST00000475339 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
ATG9A-220ENST00000475339 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
ATG9A-220ENST00000475339 SPATA45Q537H7 98 aa8.07□□□□□ -1.12
ATG9A-220ENST00000475339 Q9BRP9 147 aa8.07□□□□□ -1.12
ATG9A-220ENST00000475339 TRAV13-2A0A0B4J235 113 aa8.06□□□□□ -1.12
ATG9A-220ENST00000475339 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
ATG9A-220ENST00000475339 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
ATG9A-220ENST00000475339 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
ATG9A-220ENST00000475339 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
ATG9A-220ENST00000475339 COX7BP24311 80 aa8.04□□□□□ -1.12
ATG9A-220ENST00000475339 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
ATG9A-220ENST00000475339 C14orf144Q96I85 54 aa8.04□□□□□ -1.12
ATG9A-220ENST00000475339 DLEU1O43261 78 aa8.03□□□□□ -1.12
ATG9A-220ENST00000475339 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
ATG9A-220ENST00000475339 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
ATG9A-220ENST00000475339 MT1HP80294 61 aa8.03□□□□□ -1.12
ATG9A-220ENST00000475339 C3orf22Q8N5N4 141 aa8.03□□□□□ -1.12
ATG9A-220ENST00000475339 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
ATG9A-220ENST00000475339 A4D1N5 150 aa8.02□□□□□ -1.13
ATG9A-220ENST00000475339 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
ATG9A-220ENST00000475339 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
ATG9A-220ENST00000475339 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
ATG9A-220ENST00000475339 TRBV7-6A0A0J9YX20 115 aa8□□□□□ -1.13
ATG9A-220ENST00000475339 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
ATG9A-220ENST00000475339 A0A1B0GWB2 263 aa7.99□□□□□ -1.13
ATG9A-220ENST00000475339 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
ATG9A-220ENST00000475339 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
ATG9A-220ENST00000475339 ST20-AS1Q8NBB2 130 aa7.99□□□□□ -1.13
ATG9A-220ENST00000475339 SMIM11BQ8TCY0 68 aa7.98□□□□□ -1.13
ATG9A-220ENST00000475339 C12orf57Q99622 126 aa7.98□□□□□ -1.13
ATG9A-220ENST00000475339 MOBPQ13875 183 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 Q8NBF4 154 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 HIGD1BQ9P298 99 aa7.97□□□□□ -1.13
ATG9A-220ENST00000475339 VAMP3Q15836 100 aa7.96□□□□□ -1.14
ATG9A-220ENST00000475339 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.14
ATG9A-220ENST00000475339 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
ATG9A-220ENST00000475339 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
ATG9A-220ENST00000475339 SLC25A20O43772 301 aa7.94□□□□□ -1.14
ATG9A-220ENST00000475339 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
ATG9A-220ENST00000475339 RAB37Q96AX2 223 aa7.94□□□□□ -1.14
ATG9A-220ENST00000475339 CTAG1AP78358 180 aa7.93□□□□□ -1.14
ATG9A-220ENST00000475339 TAL2Q16559 108 aa7.93□□□□□ -1.14
ATG9A-220ENST00000475339 SSBP3-AS1Q7Z2R9 100 aa7.93□□□□□ -1.14
ATG9A-220ENST00000475339 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
ATG9A-220ENST00000475339 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
ATG9A-220ENST00000475339 H7C2G1 150 aa7.92□□□□□ -1.14
ATG9A-220ENST00000475339 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
ATG9A-220ENST00000475339 SSPOA2VEC9 5147 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms