RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
RNF220-211ENST00000474956 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
RNF220-211ENST00000474956 DNAH9Q9NYC9 4486 aa8.23□□□□□ -1.09
RNF220-211ENST00000474956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
RNF220-211ENST00000474956 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
RNF220-211ENST00000474956 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
RNF220-211ENST00000474956 K7EIL1 84 aa8.23□□□□□ -1.09
RNF220-211ENST00000474956 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
RNF220-211ENST00000474956 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
RNF220-211ENST00000474956 Q6ZRU5 148 aa8.22□□□□□ -1.09
RNF220-211ENST00000474956 IGKV2D-24A0A075B6R9 120 aa8.21□□□□□ -1.09
RNF220-211ENST00000474956 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
RNF220-211ENST00000474956 H7BZZ5 65 aa8.21□□□□□ -1.1
RNF220-211ENST00000474956 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
RNF220-211ENST00000474956 ZNF73O43830 326 aaPredicted RBP8.21□□□□□ -1.1
RNF220-211ENST00000474956 COX7BP24311 80 aa8.21□□□□□ -1.1
RNF220-211ENST00000474956 TRAV10A0A0B4J240 114 aa8.2□□□□□ -1.1
RNF220-211ENST00000474956 Q5XG85 94 aa8.2□□□□□ -1.1
RNF220-211ENST00000474956 CAMK2N2Q96S95 79 aa8.2□□□□□ -1.1
RNF220-211ENST00000474956 TRBV7-6A0A0J9YX20 115 aa8.19□□□□□ -1.1
RNF220-211ENST00000474956 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
RNF220-211ENST00000474956 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
RNF220-211ENST00000474956 H3BNG1 76 aa8.18□□□□□ -1.1
RNF220-211ENST00000474956 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
RNF220-211ENST00000474956 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
RNF220-211ENST00000474956 C1orf43Q9BWL3 253 aa8.16□□□□□ -1.1
RNF220-211ENST00000474956 EPM2AB3EWF7 344 aa8.16□□□□□ -1.1
RNF220-211ENST00000474956 Q6ZRP5 223 aa8.16□□□□□ -1.1
RNF220-211ENST00000474956 VPREB1P12018 145 aa8.15□□□□□ -1.1
RNF220-211ENST00000474956 LINC01556Q5JQF7 62 aa8.15□□□□□ -1.1
RNF220-211ENST00000474956 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
RNF220-211ENST00000474956 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
RNF220-211ENST00000474956 M0R378 163 aa8.14□□□□□ -1.11
RNF220-211ENST00000474956 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
RNF220-211ENST00000474956 RMI2Q96E14 147 aa8.14□□□□□ -1.11
RNF220-211ENST00000474956 MDFIQ99750 246 aa8.14□□□□□ -1.11
RNF220-211ENST00000474956 TM2D3Q9BRN9 247 aa8.13□□□□□ -1.11
RNF220-211ENST00000474956 PLECQ15149 4684 aaKnown RBP8.13□□□□□ -1.11
RNF220-211ENST00000474956 NDUFC1O43677 76 aa8.13□□□□□ -1.11
RNF220-211ENST00000474956 F8WEM9 126 aa8.12□□□□□ -1.11
RNF220-211ENST00000474956 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
RNF220-211ENST00000474956 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
RNF220-211ENST00000474956 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
RNF220-211ENST00000474956 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
RNF220-211ENST00000474956 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
RNF220-211ENST00000474956 SERTAD4-AS1Q5TG53 156 aa8.1□□□□□ -1.11
RNF220-211ENST00000474956 NREPQ16612 68 aa8.1□□□□□ -1.11
RNF220-211ENST00000474956 BPY2O14599 106 aa8.09□□□□□ -1.11
RNF220-211ENST00000474956 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
RNF220-211ENST00000474956 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
RNF220-211ENST00000474956 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
RNF220-211ENST00000474956 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
RNF220-211ENST00000474956 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
RNF220-211ENST00000474956 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
RNF220-211ENST00000474956 STARD9Q9P2P6 4700 aa8.06□□□□□ -1.12
RNF220-211ENST00000474956 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
RNF220-211ENST00000474956 TMEM254Q8TBM7 123 aa8.06□□□□□ -1.12
RNF220-211ENST00000474956 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
RNF220-211ENST00000474956 IGKV4-1P06312 121 aa8.05□□□□□ -1.12
RNF220-211ENST00000474956 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
RNF220-211ENST00000474956 Q8N9L7 120 aa8.04□□□□□ -1.12
RNF220-211ENST00000474956 F8WDY8 70 aa8.03□□□□□ -1.12
RNF220-211ENST00000474956 OCR1Q9BZK8 76 aa8.02□□□□□ -1.13
RNF220-211ENST00000474956 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
RNF220-211ENST00000474956 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
RNF220-211ENST00000474956 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
RNF220-211ENST00000474956 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
RNF220-211ENST00000474956 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
RNF220-211ENST00000474956 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
RNF220-211ENST00000474956 IGLV5-48A0A075B6I7 105 aa8□□□□□ -1.13
RNF220-211ENST00000474956 Q8N377 158 aa8□□□□□ -1.13
RNF220-211ENST00000474956 DYNC2H1Q8NCM8 4307 aaKnown RBP8□□□□□ -1.13
RNF220-211ENST00000474956 DEFB105AQ8NG35 78 aa8□□□□□ -1.13
RNF220-211ENST00000474956 TGP01266 2768 aa8□□□□□ -1.13
RNF220-211ENST00000474956 A0A0U1RQV1 116 aa7.99□□□□□ -1.13
RNF220-211ENST00000474956 A0A1B0GW54 56 aa7.99□□□□□ -1.13
RNF220-211ENST00000474956 PRYO14603 147 aa7.99□□□□□ -1.13
RNF220-211ENST00000474956 KMT2AQ03164 3969 aa7.99□□□□□ -1.13
RNF220-211ENST00000474956 FUSP35637 526 aaKnown RBP eCLIP7.98□□□□□ -1.13
RNF220-211ENST00000474956 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
RNF220-211ENST00000474956 DHRS4-AS1Q9P1J3 65 aa7.97□□□□□ -1.13
RNF220-211ENST00000474956 PRO0628Q9UI54 55 aa7.96□□□□□ -1.13
RNF220-211ENST00000474956 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.14
RNF220-211ENST00000474956 SEC61GP60059 68 aa7.96□□□□□ -1.14
RNF220-211ENST00000474956 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
RNF220-211ENST00000474956 Q6ZRX8 168 aa7.95□□□□□ -1.14
RNF220-211ENST00000474956 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
RNF220-211ENST00000474956 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
RNF220-211ENST00000474956 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
RNF220-211ENST00000474956 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
RNF220-211ENST00000474956 Q9BRP9 147 aa7.93□□□□□ -1.14
RNF220-211ENST00000474956 A0A1W2PNM2 257 aa7.93□□□□□ -1.14
RNF220-211ENST00000474956 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
RNF220-211ENST00000474956 APLNQ9ULZ1 77 aa7.93□□□□□ -1.14
RNF220-211ENST00000474956 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
RNF220-211ENST00000474956 TNP2Q05952 138 aa7.92□□□□□ -1.14
RNF220-211ENST00000474956 C1orf137Q5JT78 98 aa7.92□□□□□ -1.14
RNF220-211ENST00000474956 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
RNF220-211ENST00000474956 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
RNF220-211ENST00000474956 A0A096LNI7 61 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms