RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 Q9BRP9 147 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 FRAS1Q86XX4 4008 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.79
SMARCE1-208ENST00000474246 A0A0J9YY99 117 aa3.9□□□□□ -1.79
SMARCE1-208ENST00000474246 CLPSL1A2RUU4 121 aa3.9□□□□□ -1.79
SMARCE1-208ENST00000474246 LHFPL6Q9Y693 200 aa3.9□□□□□ -1.79
SMARCE1-208ENST00000474246 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
SMARCE1-208ENST00000474246 TRAV12-1A0A0B4J245 112 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 NREPQ16612 68 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 C14orf178Q8N769 122 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 OBSCN-AS1Q96MR7 158 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 WNK2Q9Y3S1 2297 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 A0A1B0GUT8 65 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 A0A1W2PNM2 257 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 H3BQ85 93 aa3.89□□□□□ -1.79
SMARCE1-208ENST00000474246 ODF3BA8MYP8 253 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 PANO1I0J062 215 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 IGLV1-44P01699 117 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 Q6ZR54 194 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 AMELXQ99217 191 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 UBL5Q9BZL1 73 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 TIMM8BQ9Y5J9 83 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 IGHV3-64DA0A0J9YX35 117 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 NDUFB1O75438 58 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 PPP1R17O96001 155 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 SPAG11BQ08648 103 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 ENHOQ6UWT2 76 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 ZNF833PQ6ZTB9 187 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 Q86TA4 180 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 LINC00167Q96N53 147 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 DEFB126Q9BYW3 111 aa3.88□□□□□ -1.79
SMARCE1-208ENST00000474246 ALPK2Q86TB3 2170 aa3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 DNAJC13O75165 2243 aa3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 LRCOL1A6NCL2 159 aa3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 DEFB108AA8MXU0 73 aa3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 KLHL30-AS1Q8NEE0 82 aa3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-208ENST00000474246 SLPIP03973 132 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 P0C879 139 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 FXYD3Q14802 87 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 KRTAP26-1Q6PEX3 210 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 ALMS1Q8TCU4 4167 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 TRAV40A0A0B4J280 105 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 F8VRH5 84 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 HIGD2BQ4VC39 106 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 C16orf74Q96GX8 76 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 MINOS1-NBL1R4GNA1 71 aa3.86□□□□□ -1.79
SMARCE1-208ENST00000474246 TRBV6-6A0A0A6YYG2 114 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 IGHV3-53P01767 116 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 IGHV3-64A0A075B6Q5 118 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 SPANXA2-OT1Q8N9U9 137 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
SMARCE1-208ENST00000474246 FREM3P0C091 2139 aa3.84□□□□□ -1.79
SMARCE1-208ENST00000474246 MALRD1Q5VYJ5 2156 aa3.84□□□□□ -1.79
SMARCE1-208ENST00000474246 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.8
SMARCE1-208ENST00000474246 M0R3E3 92 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 IGKV1-17P01599 117 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 CNBPP62633 177 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 PRR34Q9NV39 138 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 IGLV2-18A0A075B6J9 118 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 LY6G6CO95867 125 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 Q8N377 158 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 PATE1Q8WXA2 126 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 TMEM167BQ9NRX6 74 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 PLAC8Q9NZF1 115 aa3.83□□□□□ -1.8
SMARCE1-208ENST00000474246 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 IGIPA6NJ69 53 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 I3L3M4 83 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 MRPL36Q9P0J6 103 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 A0A0J9YX75 114 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 M0R1W7 72 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 LYPD1Q8N2G4 141 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 TTTY12Q9BZ98 90 aa3.82□□□□□ -1.8
SMARCE1-208ENST00000474246 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
SMARCE1-208ENST00000474246 MED12Q93074 2177 aa3.81□□□□□ -1.8
SMARCE1-208ENST00000474246 TRAV21A0A0B4J279 112 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 M0R135 149 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 ERHP84090 104 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 NUPR2A6NF83 97 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 IGLV7-43P04211 117 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 COX7B2Q8TF08 81 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 KMT2AQ03164 3969 aa3.8□□□□□ -1.8
SMARCE1-208ENST00000474246 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
SMARCE1-208ENST00000474246 ARL14EPLP0DKL9 152 aa3.79□□□□□ -1.8
SMARCE1-208ENST00000474246 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
SMARCE1-208ENST00000474246 HSPG2P98160 4391 aa3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 A0A1B0GVY2 172 aa3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 NDUFA3O95167 84 aa3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 ZCCHC13Q8WW36 166 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms