RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 IGLV6-57P01721 117 aa6.72□□□□□ -1.33
SMPD4-217ENST00000473720 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
SMPD4-217ENST00000473720 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
SMPD4-217ENST00000473720 SSBP3-AS1Q7Z2R9 100 aa6.72□□□□□ -1.33
SMPD4-217ENST00000473720 ZNF73O43830 326 aaPredicted RBP6.71□□□□□ -1.34
SMPD4-217ENST00000473720 Q8N377 158 aa6.71□□□□□ -1.34
SMPD4-217ENST00000473720 ST20-AS1Q8NBB2 130 aa6.71□□□□□ -1.34
SMPD4-217ENST00000473720 OR13C6PQ8NH95 151 aa6.71□□□□□ -1.34
SMPD4-217ENST00000473720 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
SMPD4-217ENST00000473720 COLCA2A8K830 154 aa6.7□□□□□ -1.34
SMPD4-217ENST00000473720 E9PLD3 99 aa6.7□□□□□ -1.34
SMPD4-217ENST00000473720 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
SMPD4-217ENST00000473720 SLC25A20O43772 301 aa6.68□□□□□ -1.34
SMPD4-217ENST00000473720 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
SMPD4-217ENST00000473720 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
SMPD4-217ENST00000473720 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
SMPD4-217ENST00000473720 SYS1-DBNDD2H3BUS1 97 aa6.66□□□□□ -1.34
SMPD4-217ENST00000473720 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
SMPD4-217ENST00000473720 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
SMPD4-217ENST00000473720 LINC00308Q8TCZ7 52 aa6.66□□□□□ -1.34
SMPD4-217ENST00000473720 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
SMPD4-217ENST00000473720 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
SMPD4-217ENST00000473720 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.34
SMPD4-217ENST00000473720 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
SMPD4-217ENST00000473720 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
SMPD4-217ENST00000473720 LITAFQ99732 161 aa6.64□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BKO60814 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BJP06899 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BOP23527 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BBP33778 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BDP58876 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BCP62807 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST2H2BEQ16778 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.63□□□□□ -1.35
SMPD4-217ENST00000473720 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BHQ93079 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BNQ99877 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 HIST1H2BMQ99879 126 aa6.63□□□□□ -1.35
SMPD4-217ENST00000473720 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
SMPD4-217ENST00000473720 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
SMPD4-217ENST00000473720 TIMM17BO60830 172 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 COX7BP24311 80 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
SMPD4-217ENST00000473720 TAL2Q16559 108 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 Q1RN00 199 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 XP32Q5T750 250 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 PET117Q6UWS5 81 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
SMPD4-217ENST00000473720 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
SMPD4-217ENST00000473720 C3orf79P0CE67 100 aa6.6□□□□□ -1.35
SMPD4-217ENST00000473720 KRTDAPP60985 99 aa6.6□□□□□ -1.35
SMPD4-217ENST00000473720 C6orf99Q4VX62 202 aa6.6□□□□□ -1.35
SMPD4-217ENST00000473720 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
SMPD4-217ENST00000473720 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
SMPD4-217ENST00000473720 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
SMPD4-217ENST00000473720 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
SMPD4-217ENST00000473720 H7C2G1 150 aa6.58□□□□□ -1.36
SMPD4-217ENST00000473720 SPRR1BP22528 89 aa6.58□□□□□ -1.36
SMPD4-217ENST00000473720 ELOF1P60002 83 aaKnown RBP6.58□□□□□ -1.36
SMPD4-217ENST00000473720 LINC00518Q8N0U6 118 aa6.58□□□□□ -1.36
SMPD4-217ENST00000473720 A6NDN8 102 aa6.56□□□□□ -1.36
SMPD4-217ENST00000473720 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
SMPD4-217ENST00000473720 A0A0G2JQZ4 141 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
SMPD4-217ENST00000473720 C20orf202A1L168 122 aa6.53□□□□□ -1.36
SMPD4-217ENST00000473720 IGLV8-61A0A075B6I0 122 aa6.52□□□□□ -1.37
SMPD4-217ENST00000473720 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
SMPD4-217ENST00000473720 MUSTN1Q8IVN3 82 aa6.52□□□□□ -1.37
SMPD4-217ENST00000473720 AKR1D1P51857 326 aa6.51□□□□□ -1.37
SMPD4-217ENST00000473720 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
SMPD4-217ENST00000473720 COPS9Q8WXC6 57 aa6.51□□□□□ -1.37
SMPD4-217ENST00000473720 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
SMPD4-217ENST00000473720 IFITM1P13164 125 aa6.5□□□□□ -1.37
SMPD4-217ENST00000473720 CD164Q04900 197 aa6.49□□□□□ -1.37
SMPD4-217ENST00000473720 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
SMPD4-217ENST00000473720 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
SMPD4-217ENST00000473720 SMIM11BQ8TCY0 68 aa6.48□□□□□ -1.37
SMPD4-217ENST00000473720 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
SMPD4-217ENST00000473720 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
SMPD4-217ENST00000473720 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
SMPD4-217ENST00000473720 C1orf195Q5TG92 126 aa6.46□□□□□ -1.38
SMPD4-217ENST00000473720 Q6ZVH6 145 aa6.46□□□□□ -1.38
SMPD4-217ENST00000473720 A4D1N5 150 aa6.45□□□□□ -1.38
SMPD4-217ENST00000473720 LCE2BO14633 110 aa6.45□□□□□ -1.38
SMPD4-217ENST00000473720 NHP2Q9NX24 153 aaKnown RBP6.45□□□□□ -1.38
SMPD4-217ENST00000473720 F8WEM9 126 aa6.43□□□□□ -1.38
SMPD4-217ENST00000473720 VAMP3Q15836 100 aa6.42□□□□□ -1.38
SMPD4-217ENST00000473720 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
SMPD4-217ENST00000473720 TCL1BO95988 128 aa6.41□□□□□ -1.38
SMPD4-217ENST00000473720 MT1HP80294 61 aa6.41□□□□□ -1.38
SMPD4-217ENST00000473720 Q5XG85 94 aa6.41□□□□□ -1.38
SMPD4-217ENST00000473720 S100A2P29034 98 aa6.4□□□□□ -1.38
SMPD4-217ENST00000473720 Q6ZQY7 126 aa6.4□□□□□ -1.38
SMPD4-217ENST00000473720 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms