RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ABCA13Q86UQ4 5058 aa12.11□□□□□ -0.47
SF1-213ENST00000472725 TRAV13-2A0A0B4J235 113 aa12.1□□□□□ -0.47
SF1-213ENST00000472725 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
SF1-213ENST00000472725 C2orf91Q6ZV80 131 aa12.1□□□□□ -0.47
SF1-213ENST00000472725 A4D1N5 150 aa12.08□□□□□ -0.48
SF1-213ENST00000472725 ZNF73O43830 326 aaPredicted RBP12.08□□□□□ -0.48
SF1-213ENST00000472725 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
SF1-213ENST00000472725 PRLHP81277 87 aa12.08□□□□□ -0.48
SF1-213ENST00000472725 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
SF1-213ENST00000472725 PKHD1L1Q86WI1 4243 aa12.07□□□□□ -0.48
SF1-213ENST00000472725 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
SF1-213ENST00000472725 UQCR10Q9UDW1 63 aa12.07□□□□□ -0.48
SF1-213ENST00000472725 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
SF1-213ENST00000472725 A6NDN8 102 aa12.05□□□□□ -0.48
SF1-213ENST00000472725 B5MCH6 92 aa12.05□□□□□ -0.48
SF1-213ENST00000472725 Q6ZRX8 168 aa12.04□□□□□ -0.48
SF1-213ENST00000472725 TRBV7-6A0A0J9YX20 115 aa12.02□□□□□ -0.49
SF1-213ENST00000472725 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
SF1-213ENST00000472725 A6NJY4 79 aa12.01□□□□□ -0.49
SF1-213ENST00000472725 J3QL48 77 aa12.01□□□□□ -0.49
SF1-213ENST00000472725 CEND1Q8N111 149 aa12.01□□□□□ -0.49
SF1-213ENST00000472725 HIGD2AQ9BW72 106 aa12.01□□□□□ -0.49
SF1-213ENST00000472725 KRTAP1-4P0C5Y4 121 aa12□□□□□ -0.49
SF1-213ENST00000472725 HSD52Q0P140 79 aa11.99□□□□□ -0.49
SF1-213ENST00000472725 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
SF1-213ENST00000472725 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
SF1-213ENST00000472725 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
SF1-213ENST00000472725 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
SF1-213ENST00000472725 A0A1B0GWB2 263 aa11.96□□□□□ -0.49
SF1-213ENST00000472725 ELOF1P60002 83 aaKnown RBP11.96□□□□□ -0.49
SF1-213ENST00000472725 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 COX7BP24311 80 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
SF1-213ENST00000472725 FAM229BQ4G0N7 80 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 SMIM11BQ8TCY0 68 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 Q9BRP9 147 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 DHRS4-AS1Q9P1J3 65 aa11.95□□□□□ -0.5
SF1-213ENST00000472725 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
SF1-213ENST00000472725 MT1HL1P0DM35 61 aa11.94□□□□□ -0.5
SF1-213ENST00000472725 KRTAP10-8P60410 259 aa11.94□□□□□ -0.5
SF1-213ENST00000472725 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
SF1-213ENST00000472725 C12orf57Q99622 126 aa11.93□□□□□ -0.5
SF1-213ENST00000472725 VAMP3Q15836 100 aa11.92□□□□□ -0.5
SF1-213ENST00000472725 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
SF1-213ENST00000472725 CRYGAP11844 174 aa11.91□□□□□ -0.5
SF1-213ENST00000472725 FXYD2P54710 66 aa11.91□□□□□ -0.5
SF1-213ENST00000472725 PRO1933Q9H354 126 aa11.91□□□□□ -0.5
SF1-213ENST00000472725 TSTD3H0UI37 97 aa11.89□□□□□ -0.51
SF1-213ENST00000472725 PRR26Q8N8Z3 221 aa11.89□□□□□ -0.51
SF1-213ENST00000472725 ERC2-IT1O76042 136 aa11.88□□□□□ -0.51
SF1-213ENST00000472725 NHP2Q9NX24 153 aaKnown RBP11.88□□□□□ -0.51
SF1-213ENST00000472725 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
SF1-213ENST00000472725 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
SF1-213ENST00000472725 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
SF1-213ENST00000472725 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
SF1-213ENST00000472725 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
SF1-213ENST00000472725 FAT3Q8TDW7 4589 aa11.86□□□□□ -0.51
SF1-213ENST00000472725 A0A087X002 238 aa11.84□□□□□ -0.51
SF1-213ENST00000472725 SLC25A20O43772 301 aa11.83□□□□□ -0.52
SF1-213ENST00000472725 M0R143 59 aa11.82□□□□□ -0.52
SF1-213ENST00000472725 ANAPC11Q9NYG5 84 aa11.82□□□□□ -0.52
SF1-213ENST00000472725 H7C2G1 150 aa11.81□□□□□ -0.52
SF1-213ENST00000472725 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
SF1-213ENST00000472725 H0YGX0 51 aa11.8□□□□□ -0.52
SF1-213ENST00000472725 Q1RN00 199 aa11.8□□□□□ -0.52
SF1-213ENST00000472725 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
SF1-213ENST00000472725 TYMSOSQ8TAI1 123 aa11.8□□□□□ -0.52
SF1-213ENST00000472725 SPRR1BP22528 89 aa11.79□□□□□ -0.52
SF1-213ENST00000472725 CTAG1AP78358 180 aa11.79□□□□□ -0.52
SF1-213ENST00000472725 KRTAP13-2Q52LG2 175 aa11.78□□□□□ -0.52
SF1-213ENST00000472725 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
SF1-213ENST00000472725 hADV29S1A0JD25 119 aa11.76□□□□□ -0.53
SF1-213ENST00000472725 SNCGO76070 127 aa11.76□□□□□ -0.53
SF1-213ENST00000472725 IGLV5-48A0A075B6I7 105 aa11.74□□□□□ -0.53
SF1-213ENST00000472725 TEX49A0A1B0GTD5 131 aa11.74□□□□□ -0.53
SF1-213ENST00000472725 A0A1B0GX51 115 aa11.72□□□□□ -0.53
SF1-213ENST00000472725 K7ERJ3 54 aa11.72□□□□□ -0.53
SF1-213ENST00000472725 TNXBP22105 4242 aa11.71□□□□□ -0.53
SF1-213ENST00000472725 COX6CP09669 75 aa11.71□□□□□ -0.53
SF1-213ENST00000472725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.71□□□□□ -0.53
SF1-213ENST00000472725 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
SF1-213ENST00000472725 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.53
SF1-213ENST00000472725 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
SF1-213ENST00000472725 TRIAP1O43715 76 aa11.69□□□□□ -0.54
SF1-213ENST00000472725 TSPAN13O95857 204 aa11.69□□□□□ -0.54
SF1-213ENST00000472725 PSMB2P49721 201 aa11.68□□□□□ -0.54
SF1-213ENST00000472725 LINC01547P58512 204 aaPredicted RBP11.68□□□□□ -0.54
SF1-213ENST00000472725 Q6ZQY7 126 aa11.68□□□□□ -0.54
SF1-213ENST00000472725 DEFB105AQ8NG35 78 aa11.68□□□□□ -0.54
SF1-213ENST00000472725 PPDPFLQ8WWR9 84 aa11.68□□□□□ -0.54
SF1-213ENST00000472725 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
SF1-213ENST00000472725 SPAG11AQ6PDA7 123 aa11.67□□□□□ -0.54
SF1-213ENST00000472725 LINC00304Q8N9R0 145 aa11.67□□□□□ -0.54
SF1-213ENST00000472725 IGLV9-49A0A0B4J1Y8 123 aa11.66□□□□□ -0.54
SF1-213ENST00000472725 GHRHP01286 108 aa11.65□□□□□ -0.54
SF1-213ENST00000472725 MOBPQ13875 183 aa11.65□□□□□ -0.54
SF1-213ENST00000472725 Q8N377 158 aa11.65□□□□□ -0.54
SF1-213ENST00000472725 Q8NBF4 154 aa11.65□□□□□ -0.54
SF1-213ENST00000472725 C9orf153Q5TBE3 101 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms