RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 A0A096LNJ9 63 aa7.29□□□□□ -1.24
SMURF1-203ENST00000472627 LOC107984156A0A0G2JMH3 177 aa7.29□□□□□ -1.24
SMURF1-203ENST00000472627 LINC00614P0C842 121 aa7.29□□□□□ -1.24
SMURF1-203ENST00000472627 ARL17AQ8IVW1 177 aa7.29□□□□□ -1.24
SMURF1-203ENST00000472627 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
SMURF1-203ENST00000472627 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
SMURF1-203ENST00000472627 NDUFC2O95298 119 aa7.28□□□□□ -1.24
SMURF1-203ENST00000472627 IFITM2Q01629 132 aa7.28□□□□□ -1.24
SMURF1-203ENST00000472627 SEC11CQ9BY50 192 aa7.28□□□□□ -1.24
SMURF1-203ENST00000472627 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
SMURF1-203ENST00000472627 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
SMURF1-203ENST00000472627 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.25
SMURF1-203ENST00000472627 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
SMURF1-203ENST00000472627 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
SMURF1-203ENST00000472627 PMCHL1Q16048 86 aa7.26□□□□□ -1.25
SMURF1-203ENST00000472627 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
SMURF1-203ENST00000472627 TRAV12-1A0A0B4J245 112 aa7.25□□□□□ -1.25
SMURF1-203ENST00000472627 C20orf202A1L168 122 aa7.25□□□□□ -1.25
SMURF1-203ENST00000472627 AKR1D1P51857 326 aa7.24□□□□□ -1.25
SMURF1-203ENST00000472627 TAL2Q16559 108 aa7.23□□□□□ -1.25
SMURF1-203ENST00000472627 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
SMURF1-203ENST00000472627 TCL1BO95988 128 aa7.22□□□□□ -1.25
SMURF1-203ENST00000472627 Q1RN00 199 aa7.22□□□□□ -1.25
SMURF1-203ENST00000472627 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
SMURF1-203ENST00000472627 TRBV20-1A0A075B6N2 111 aa7.2□□□□□ -1.26
SMURF1-203ENST00000472627 C10orf91Q5T1B1 145 aa7.2□□□□□ -1.26
SMURF1-203ENST00000472627 IFI27L1Q96BM0 104 aa7.2□□□□□ -1.26
SMURF1-203ENST00000472627 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
SMURF1-203ENST00000472627 TEX49A0A1B0GTD5 131 aa7.19□□□□□ -1.26
SMURF1-203ENST00000472627 RHEBQ15382 184 aa7.19□□□□□ -1.26
SMURF1-203ENST00000472627 DEFB105AQ8NG35 78 aa7.19□□□□□ -1.26
SMURF1-203ENST00000472627 NMUP48645 174 aa7.18□□□□□ -1.26
SMURF1-203ENST00000472627 LEPROTO15243 131 aa7.17□□□□□ -1.26
SMURF1-203ENST00000472627 Q75L30 129 aa7.17□□□□□ -1.26
SMURF1-203ENST00000472627 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
SMURF1-203ENST00000472627 HERVK_113P61574 105 aa7.16□□□□□ -1.26
SMURF1-203ENST00000472627 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
SMURF1-203ENST00000472627 LGALS3P17931 250 aaKnown RBP7.15□□□□□ -1.26
SMURF1-203ENST00000472627 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
SMURF1-203ENST00000472627 RPS10P5Q9NQ39 176 aa7.15□□□□□ -1.26
SMURF1-203ENST00000472627 J3QQQ9 107 aa7.14□□□□□ -1.27
SMURF1-203ENST00000472627 COX7BP24311 80 aa7.14□□□□□ -1.27
SMURF1-203ENST00000472627 TSPEAR-AS2P59090 65 aa7.14□□□□□ -1.27
SMURF1-203ENST00000472627 MT2AP02795 61 aa7.13□□□□□ -1.27
SMURF1-203ENST00000472627 ELOF1P60002 83 aaKnown RBP7.13□□□□□ -1.27
SMURF1-203ENST00000472627 NPC2P61916 151 aa7.13□□□□□ -1.27
SMURF1-203ENST00000472627 LCE2BO14633 110 aa7.12□□□□□ -1.27
SMURF1-203ENST00000472627 CHCHD1Q96BP2 118 aaKnown RBP7.12□□□□□ -1.27
SMURF1-203ENST00000472627 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
SMURF1-203ENST00000472627 PLNP26678 52 aa7.11□□□□□ -1.27
SMURF1-203ENST00000472627 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
SMURF1-203ENST00000472627 H0Y8G0 127 aa7.1□□□□□ -1.27
SMURF1-203ENST00000472627 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
SMURF1-203ENST00000472627 SOSTDC1Q6X4U4 206 aa7.1□□□□□ -1.27
SMURF1-203ENST00000472627 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
SMURF1-203ENST00000472627 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
SMURF1-203ENST00000472627 UQCC3Q6UW78 93 aa7.09□□□□□ -1.27
SMURF1-203ENST00000472627 TMEM218A2RU14 115 aa7.08□□□□□ -1.28
SMURF1-203ENST00000472627 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
SMURF1-203ENST00000472627 F8WEM9 126 aa7.07□□□□□ -1.28
SMURF1-203ENST00000472627 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
SMURF1-203ENST00000472627 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
SMURF1-203ENST00000472627 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
SMURF1-203ENST00000472627 HSBP1O75506 76 aa7.06□□□□□ -1.28
SMURF1-203ENST00000472627 MT1FP04733 61 aa7.06□□□□□ -1.28
SMURF1-203ENST00000472627 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
SMURF1-203ENST00000472627 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
SMURF1-203ENST00000472627 A0A0J9YXY3 114 aa7.05□□□□□ -1.28
SMURF1-203ENST00000472627 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
SMURF1-203ENST00000472627 ADAMTSL4-AS1Q5T5F5 129 aa7.05□□□□□ -1.28
SMURF1-203ENST00000472627 LINC00518Q8N0U6 118 aa7.05□□□□□ -1.28
SMURF1-203ENST00000472627 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SMURF1-203ENST00000472627 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
SMURF1-203ENST00000472627 DPM2O94777 84 aa7.03□□□□□ -1.28
SMURF1-203ENST00000472627 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
SMURF1-203ENST00000472627 Q96NJ1 140 aa7.03□□□□□ -1.28
SMURF1-203ENST00000472627 NHP2Q9NX24 153 aaKnown RBP7.03□□□□□ -1.28
SMURF1-203ENST00000472627 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
SMURF1-203ENST00000472627 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
SMURF1-203ENST00000472627 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
SMURF1-203ENST00000472627 A4D1N5 150 aa7□□□□□ -1.29
SMURF1-203ENST00000472627 LEPROTL1O95214 131 aa7□□□□□ -1.29
SMURF1-203ENST00000472627 IGKCP01834 107 aa7□□□□□ -1.29
SMURF1-203ENST00000472627 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
SMURF1-203ENST00000472627 Q6JHZ5 121 aa6.98□□□□□ -1.29
SMURF1-203ENST00000472627 IGFL1Q6UW32 110 aa6.98□□□□□ -1.29
SMURF1-203ENST00000472627 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
SMURF1-203ENST00000472627 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
SMURF1-203ENST00000472627 TIMM17BO60830 172 aa6.97□□□□□ -1.29
SMURF1-203ENST00000472627 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
SMURF1-203ENST00000472627 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
SMURF1-203ENST00000472627 E9PLD3 99 aa6.96□□□□□ -1.3
SMURF1-203ENST00000472627 LST1O00453 97 aa6.95□□□□□ -1.3
SMURF1-203ENST00000472627 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
SMURF1-203ENST00000472627 LITAFQ99732 161 aa6.94□□□□□ -1.3
SMURF1-203ENST00000472627 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
SMURF1-203ENST00000472627 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
SMURF1-203ENST00000472627 A8MUU9 505 aa6.93□□□□□ -1.3
SMURF1-203ENST00000472627 A6NDN8 102 aa6.92□□□□□ -1.3
SMURF1-203ENST00000472627 SLC7A5P1Q8MH63 180 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms