RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TRAV23DV6A0A075B6W5 121 aa9.14□□□□□ -0.95
HDAC6-218ENST00000470942 ATOH7Q8N100 152 aa9.13□□□□□ -0.95
HDAC6-218ENST00000470942 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
HDAC6-218ENST00000470942 ANKRD39Q53RE8 183 aa9.12□□□□□ -0.95
HDAC6-218ENST00000470942 OR13C6PQ8NH95 151 aa9.12□□□□□ -0.95
HDAC6-218ENST00000470942 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
HDAC6-218ENST00000470942 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
HDAC6-218ENST00000470942 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
HDAC6-218ENST00000470942 Q6ZRX8 168 aa9.11□□□□□ -0.95
HDAC6-218ENST00000470942 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-218ENST00000470942 S100A2P29034 98 aa9.1□□□□□ -0.95
HDAC6-218ENST00000470942 AKR1D1P51857 326 aa9.1□□□□□ -0.95
HDAC6-218ENST00000470942 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-218ENST00000470942 Q9BRP9 147 aa9.1□□□□□ -0.95
HDAC6-218ENST00000470942 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
HDAC6-218ENST00000470942 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
HDAC6-218ENST00000470942 HINT1P49773 126 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-218ENST00000470942 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
HDAC6-218ENST00000470942 LINC00483Q53H64 154 aa9.07□□□□□ -0.96
HDAC6-218ENST00000470942 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
HDAC6-218ENST00000470942 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
HDAC6-218ENST00000470942 SPANXDQ9BXN6 97 aa9.07□□□□□ -0.96
HDAC6-218ENST00000470942 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
HDAC6-218ENST00000470942 S100A6P06703 90 aa9.06□□□□□ -0.96
HDAC6-218ENST00000470942 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
HDAC6-218ENST00000470942 PCP2Q8IVA1 136 aa9.06□□□□□ -0.96
HDAC6-218ENST00000470942 Q8NBF4 154 aa9.06□□□□□ -0.96
HDAC6-218ENST00000470942 HIST1H2BLQ99880 126 aa9.06□□□□□ -0.96
HDAC6-218ENST00000470942 IGLV9-49A0A0B4J1Y8 123 aa9.05□□□□□ -0.96
HDAC6-218ENST00000470942 CTAG1AP78358 180 aa9.05□□□□□ -0.96
HDAC6-218ENST00000470942 COPS9Q8WXC6 57 aa9.05□□□□□ -0.96
HDAC6-218ENST00000470942 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
HDAC6-218ENST00000470942 IFITM1P13164 125 aa9.03□□□□□ -0.96
HDAC6-218ENST00000470942 MOBPQ13875 183 aa9.02□□□□□ -0.97
HDAC6-218ENST00000470942 HSBP1L1C9JCN9 74 aa9.01□□□□□ -0.97
HDAC6-218ENST00000470942 Q6ZVH6 145 aa9.01□□□□□ -0.97
HDAC6-218ENST00000470942 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
HDAC6-218ENST00000470942 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
HDAC6-218ENST00000470942 COX7BP24311 80 aa9□□□□□ -0.97
HDAC6-218ENST00000470942 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
HDAC6-218ENST00000470942 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
HDAC6-218ENST00000470942 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
HDAC6-218ENST00000470942 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
HDAC6-218ENST00000470942 A6NDN8 102 aa8.98□□□□□ -0.97
HDAC6-218ENST00000470942 C9orf153Q5TBE3 101 aa8.98□□□□□ -0.97
HDAC6-218ENST00000470942 C5orf52A6NGY3 159 aa8.97□□□□□ -0.97
HDAC6-218ENST00000470942 SPINK1P00995 79 aa8.97□□□□□ -0.97
HDAC6-218ENST00000470942 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
HDAC6-218ENST00000470942 SCGB1D1O95968 90 aa8.96□□□□□ -0.98
HDAC6-218ENST00000470942 TRAV13-2A0A0B4J235 113 aa8.93□□□□□ -0.98
HDAC6-218ENST00000470942 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
HDAC6-218ENST00000470942 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
HDAC6-218ENST00000470942 TAL2Q16559 108 aa8.92□□□□□ -0.98
HDAC6-218ENST00000470942 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
HDAC6-218ENST00000470942 SLC25A34Q6PIV7 304 aa8.92□□□□□ -0.98
HDAC6-218ENST00000470942 A0A1B0GWB2 263 aa8.91□□□□□ -0.98
HDAC6-218ENST00000470942 SPRR1BP22528 89 aa8.91□□□□□ -0.98
HDAC6-218ENST00000470942 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-218ENST00000470942 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
HDAC6-218ENST00000470942 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
HDAC6-218ENST00000470942 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
HDAC6-218ENST00000470942 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
HDAC6-218ENST00000470942 A4D1N5 150 aa8.87□□□□□ -0.99
HDAC6-218ENST00000470942 Q8N377 158 aa8.87□□□□□ -0.99
HDAC6-218ENST00000470942 TEX49A0A1B0GTD5 131 aa8.86□□□□□ -0.99
HDAC6-218ENST00000470942 SLC25A20O43772 301 aa8.86□□□□□ -0.99
HDAC6-218ENST00000470942 Q1RN00 199 aa8.86□□□□□ -0.99
HDAC6-218ENST00000470942 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
HDAC6-218ENST00000470942 HIST1H4GQ99525 98 aa8.85□□□□□ -0.99
HDAC6-218ENST00000470942 COX8AP10176 69 aa8.84□□□□□ -0.99
HDAC6-218ENST00000470942 VAMP3Q15836 100 aa8.84□□□□□ -0.99
HDAC6-218ENST00000470942 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
HDAC6-218ENST00000470942 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
HDAC6-218ENST00000470942 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
HDAC6-218ENST00000470942 C12orf57Q99622 126 aa8.81□□□□□ -1
HDAC6-218ENST00000470942 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 DLEU1O43261 78 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 SPATA45Q537H7 98 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 SMIM29Q86T20 159 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 C14orf144Q96I85 54 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 PRO1933Q9H354 126 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 PAM16Q9Y3D7 125 aa8.8□□□□□ -1
HDAC6-218ENST00000470942 LIMD2Q9BT23 127 aa8.79□□□□□ -1
HDAC6-218ENST00000470942 MUC17Q685J3 4493 aa8.79□□□□□ -1
HDAC6-218ENST00000470942 MUC2Q02817 5179 aa8.79□□□□□ -1
HDAC6-218ENST00000470942 VAMP8Q9BV40 100 aa8.78□□□□□ -1
HDAC6-218ENST00000470942 LINC00575Q6W349 94 aa8.77□□□□□ -1.01
HDAC6-218ENST00000470942 A0A0U1RQV1 116 aa8.76□□□□□ -1.01
HDAC6-218ENST00000470942 H7C2G1 150 aa8.76□□□□□ -1.01
HDAC6-218ENST00000470942 hADV29S1A0JD25 119 aa8.75□□□□□ -1.01
HDAC6-218ENST00000470942 CD164Q04900 197 aa8.75□□□□□ -1.01
HDAC6-218ENST00000470942 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
HDAC6-218ENST00000470942 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
HDAC6-218ENST00000470942 F8WEM9 126 aa8.73□□□□□ -1.01
HDAC6-218ENST00000470942 Q6ZQY7 126 aa8.73□□□□□ -1.01
HDAC6-218ENST00000470942 RAB37Q96AX2 223 aa8.73□□□□□ -1.01
HDAC6-218ENST00000470942 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
HDAC6-218ENST00000470942 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
HDAC6-218ENST00000470942 CFC1P0CG37 223 aa8.71□□□□□ -1.02
HDAC6-218ENST00000470942 C2orf91Q6ZV80 131 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms