RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ANKRD39Q53RE8 183 aa8.29□□□□□ -1.08
TOP3B-215ENST00000470338 S100A7L2Q5SY68 101 aa8.29□□□□□ -1.08
TOP3B-215ENST00000470338 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
TOP3B-215ENST00000470338 ATOH7Q8N100 152 aa8.28□□□□□ -1.08
TOP3B-215ENST00000470338 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
TOP3B-215ENST00000470338 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
TOP3B-215ENST00000470338 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
TOP3B-215ENST00000470338 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
TOP3B-215ENST00000470338 LPAP08519 4548 aa8.25□□□□□ -1.09
TOP3B-215ENST00000470338 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
TOP3B-215ENST00000470338 TSPAN13O95857 204 aa8.25□□□□□ -1.09
TOP3B-215ENST00000470338 Q6ZRX8 168 aa8.25□□□□□ -1.09
TOP3B-215ENST00000470338 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
TOP3B-215ENST00000470338 SCGB1D4Q6XE38 83 aa8.24□□□□□ -1.09
TOP3B-215ENST00000470338 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
TOP3B-215ENST00000470338 Q9BRP9 147 aa8.24□□□□□ -1.09
TOP3B-215ENST00000470338 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
TOP3B-215ENST00000470338 SMIM6P0DI80 62 aa8.23□□□□□ -1.09
TOP3B-215ENST00000470338 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
TOP3B-215ENST00000470338 PCP2Q8IVA1 136 aa8.23□□□□□ -1.09
TOP3B-215ENST00000470338 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
TOP3B-215ENST00000470338 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
TOP3B-215ENST00000470338 HSBP1L1C9JCN9 74 aa8.22□□□□□ -1.09
TOP3B-215ENST00000470338 ERC2-IT1O76042 136 aa8.22□□□□□ -1.09
TOP3B-215ENST00000470338 CTAG1AP78358 180 aa8.22□□□□□ -1.09
TOP3B-215ENST00000470338 LINC00518Q8N0U6 118 aa8.22□□□□□ -1.09
TOP3B-215ENST00000470338 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
TOP3B-215ENST00000470338 IFITM1P13164 125 aa8.21□□□□□ -1.1
TOP3B-215ENST00000470338 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
TOP3B-215ENST00000470338 Q6ZVH6 145 aa8.21□□□□□ -1.1
TOP3B-215ENST00000470338 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
TOP3B-215ENST00000470338 PRR4Q16378 134 aa8.19□□□□□ -1.1
TOP3B-215ENST00000470338 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
TOP3B-215ENST00000470338 VAMP8Q9BV40 100 aa8.19□□□□□ -1.1
TOP3B-215ENST00000470338 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-215ENST00000470338 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
TOP3B-215ENST00000470338 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
TOP3B-215ENST00000470338 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
TOP3B-215ENST00000470338 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
TOP3B-215ENST00000470338 SPATA45Q537H7 98 aa8.14□□□□□ -1.11
TOP3B-215ENST00000470338 C12orf57Q99622 126 aa8.14□□□□□ -1.11
TOP3B-215ENST00000470338 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
TOP3B-215ENST00000470338 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
TOP3B-215ENST00000470338 Q8NBF4 154 aa8.13□□□□□ -1.11
TOP3B-215ENST00000470338 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
TOP3B-215ENST00000470338 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
TOP3B-215ENST00000470338 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
TOP3B-215ENST00000470338 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
TOP3B-215ENST00000470338 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
TOP3B-215ENST00000470338 COX7BP24311 80 aa8.11□□□□□ -1.11
TOP3B-215ENST00000470338 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
TOP3B-215ENST00000470338 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
TOP3B-215ENST00000470338 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
TOP3B-215ENST00000470338 A6NDN8 102 aa8.1□□□□□ -1.11
TOP3B-215ENST00000470338 SPRR1BP22528 89 aa8.1□□□□□ -1.11
TOP3B-215ENST00000470338 MOBPQ13875 183 aa8.1□□□□□ -1.11
TOP3B-215ENST00000470338 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
TOP3B-215ENST00000470338 SPINK1P00995 79 aa8.08□□□□□ -1.12
TOP3B-215ENST00000470338 COX8AP10176 69 aa8.08□□□□□ -1.12
TOP3B-215ENST00000470338 A0A1B0GWB2 263 aa8.07□□□□□ -1.12
TOP3B-215ENST00000470338 DLEU1O43261 78 aa8.06□□□□□ -1.12
TOP3B-215ENST00000470338 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
TOP3B-215ENST00000470338 A4D1N5 150 aa8.05□□□□□ -1.12
TOP3B-215ENST00000470338 TSTD3H0UI37 97 aa8.05□□□□□ -1.12
TOP3B-215ENST00000470338 RPS29P62273 56 aaKnown RBP8.05□□□□□ -1.12
TOP3B-215ENST00000470338 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
TOP3B-215ENST00000470338 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
TOP3B-215ENST00000470338 IGLV7-46A0A075B6I9 117 aa8.04□□□□□ -1.12
TOP3B-215ENST00000470338 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
TOP3B-215ENST00000470338 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
TOP3B-215ENST00000470338 C9orf153Q5TBE3 101 aa8.03□□□□□ -1.12
TOP3B-215ENST00000470338 TAL2Q16559 108 aa8.02□□□□□ -1.13
TOP3B-215ENST00000470338 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
TOP3B-215ENST00000470338 HIST1H4GQ99525 98 aa8.02□□□□□ -1.13
TOP3B-215ENST00000470338 PRO1933Q9H354 126 aa8.02□□□□□ -1.13
TOP3B-215ENST00000470338 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
TOP3B-215ENST00000470338 LAMTOR3Q9UHA4 124 aa8.01□□□□□ -1.13
TOP3B-215ENST00000470338 IGLV5-48A0A075B6I7 105 aa8□□□□□ -1.13
TOP3B-215ENST00000470338 LINC01547P58512 204 aaPredicted RBP8□□□□□ -1.13
TOP3B-215ENST00000470338 Q8N377 158 aa8□□□□□ -1.13
TOP3B-215ENST00000470338 DEFB105AQ8NG35 78 aa8□□□□□ -1.13
TOP3B-215ENST00000470338 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
TOP3B-215ENST00000470338 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
TOP3B-215ENST00000470338 VAMP3Q15836 100 aa7.98□□□□□ -1.13
TOP3B-215ENST00000470338 SMIM29Q86T20 159 aa7.98□□□□□ -1.13
TOP3B-215ENST00000470338 SLC25A20O43772 301 aa7.97□□□□□ -1.13
TOP3B-215ENST00000470338 Q1RN00 199 aa7.96□□□□□ -1.14
TOP3B-215ENST00000470338 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
TOP3B-215ENST00000470338 C2orf91Q6ZV80 131 aa7.96□□□□□ -1.14
TOP3B-215ENST00000470338 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
TOP3B-215ENST00000470338 KRTAP13-3Q3SY46 172 aa7.94□□□□□ -1.14
TOP3B-215ENST00000470338 MUC2Q02817 5179 aa7.94□□□□□ -1.14
TOP3B-215ENST00000470338 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
TOP3B-215ENST00000470338 CFC1P0CG37 223 aa7.93□□□□□ -1.14
TOP3B-215ENST00000470338 CD164Q04900 197 aa7.93□□□□□ -1.14
TOP3B-215ENST00000470338 MUC17Q685J3 4493 aa7.93□□□□□ -1.14
TOP3B-215ENST00000470338 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
TOP3B-215ENST00000470338 HSD52Q0P140 79 aa7.92□□□□□ -1.14
TOP3B-215ENST00000470338 BVES-AS1Q5T3Y7 98 aa7.91□□□□□ -1.14
TOP3B-215ENST00000470338 HRCT1Q6UXD1 115 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms