RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 Q6ZQY7 126 aa13.31□□□□□ -0.28
CDHR3-207ENST00000470188 IGKV2D-24A0A075B6R9 120 aa13.31□□□□□ -0.28
CDHR3-207ENST00000470188 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
CDHR3-207ENST00000470188 TRAV10A0A0B4J240 114 aa13.28□□□□□ -0.28
CDHR3-207ENST00000470188 DIRC1Q969H9 104 aa13.28□□□□□ -0.28
CDHR3-207ENST00000470188 VPREB1P12018 145 aa13.27□□□□□ -0.28
CDHR3-207ENST00000470188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.27□□□□□ -0.28
CDHR3-207ENST00000470188 TRBV7-4A0A0J9YYF1 115 aa13.26□□□□□ -0.29
CDHR3-207ENST00000470188 NDUFC1O43677 76 aa13.25□□□□□ -0.29
CDHR3-207ENST00000470188 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
CDHR3-207ENST00000470188 DNAH10OSP0CZ25 163 aa13.25□□□□□ -0.29
CDHR3-207ENST00000470188 PRB2P02812 416 aaPredicted RBP13.24□□□□□ -0.29
CDHR3-207ENST00000470188 F8WDY8 70 aa13.23□□□□□ -0.29
CDHR3-207ENST00000470188 M0R378 163 aa13.22□□□□□ -0.29
CDHR3-207ENST00000470188 TRBV7-6A0A0J9YX20 115 aa13.22□□□□□ -0.29
CDHR3-207ENST00000470188 COX7BP24311 80 aa13.21□□□□□ -0.29
CDHR3-207ENST00000470188 SYCNQ0VAF6 134 aa13.21□□□□□ -0.29
CDHR3-207ENST00000470188 Q6ZRP5 223 aa13.21□□□□□ -0.3
CDHR3-207ENST00000470188 MRAPQ8TCY5 172 aa13.21□□□□□ -0.3
CDHR3-207ENST00000470188 RMI2Q96E14 147 aa13.21□□□□□ -0.3
CDHR3-207ENST00000470188 SNURFQ9Y675 71 aa13.21□□□□□ -0.3
CDHR3-207ENST00000470188 ATP5EP56381 51 aaPredicted RBP13.2□□□□□ -0.3
CDHR3-207ENST00000470188 ELOF1P60002 83 aaKnown RBP13.2□□□□□ -0.3
CDHR3-207ENST00000470188 F8WEM9 126 aa13.19□□□□□ -0.3
CDHR3-207ENST00000470188 MDFIQ99750 246 aa13.19□□□□□ -0.3
CDHR3-207ENST00000470188 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
CDHR3-207ENST00000470188 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
CDHR3-207ENST00000470188 SMIM26A0A096LP01 95 aa13.18□□□□□ -0.3
CDHR3-207ENST00000470188 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
CDHR3-207ENST00000470188 ERC2-IT1O76042 136 aa13.15□□□□□ -0.3
CDHR3-207ENST00000470188 K7EIL1 84 aa13.14□□□□□ -0.31
CDHR3-207ENST00000470188 NREPQ16612 68 aa13.13□□□□□ -0.31
CDHR3-207ENST00000470188 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
CDHR3-207ENST00000470188 BPY2O14599 106 aa13.1□□□□□ -0.31
CDHR3-207ENST00000470188 LINC00528Q8N1L1 170 aa13.1□□□□□ -0.31
CDHR3-207ENST00000470188 NKAPP1Q8N9T2 125 aa13.1□□□□□ -0.31
CDHR3-207ENST00000470188 NBEAL1Q6ZS30 2694 aa13.09□□□□□ -0.31
CDHR3-207ENST00000470188 PRO0628Q9UI54 55 aa13.09□□□□□ -0.31
CDHR3-207ENST00000470188 HUWE1Q7Z6Z7 4374 aaKnown RBP13.09□□□□□ -0.31
CDHR3-207ENST00000470188 CASC10Q5T4H9 136 aa13.08□□□□□ -0.31
CDHR3-207ENST00000470188 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.31
CDHR3-207ENST00000470188 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.32
CDHR3-207ENST00000470188 SERTAD4-AS1Q5TG53 156 aa13.08□□□□□ -0.32
CDHR3-207ENST00000470188 FP248Q71RG6 208 aaPredicted RBP13.08□□□□□ -0.32
CDHR3-207ENST00000470188 MGAM2Q2M2H8 2515 aa13.06□□□□□ -0.32
CDHR3-207ENST00000470188 LINC00336Q6ZUF6 198 aa13.05□□□□□ -0.32
CDHR3-207ENST00000470188 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
CDHR3-207ENST00000470188 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
CDHR3-207ENST00000470188 DNAH1Q9P2D7 4330 aa13.04□□□□□ -0.32
CDHR3-207ENST00000470188 IGKV4-1P06312 121 aa13.03□□□□□ -0.32
CDHR3-207ENST00000470188 PLA2G2DQ9UNK4 145 aa13.03□□□□□ -0.32
CDHR3-207ENST00000470188 OCR1Q9BZK8 76 aa13□□□□□ -0.33
CDHR3-207ENST00000470188 A0A0U1RQV1 116 aa12.98□□□□□ -0.33
CDHR3-207ENST00000470188 FAM168BA1KXE4 195 aa12.98□□□□□ -0.33
CDHR3-207ENST00000470188 PRYO14603 147 aa12.97□□□□□ -0.33
CDHR3-207ENST00000470188 IGLV5-37A0A075B6J1 123 aa12.97□□□□□ -0.33
CDHR3-207ENST00000470188 Q8N9L7 120 aa12.96□□□□□ -0.33
CDHR3-207ENST00000470188 RPL37AP8A6NKH3 93 aa12.96□□□□□ -0.34
CDHR3-207ENST00000470188 LINC00474Q9P2X8 69 aa12.95□□□□□ -0.34
CDHR3-207ENST00000470188 A0A1B0GW54 56 aa12.94□□□□□ -0.34
CDHR3-207ENST00000470188 IGLV1-50A0A075B6I6 118 aa12.93□□□□□ -0.34
CDHR3-207ENST00000470188 KRTAP7-1Q8IUC3 87 aa12.92□□□□□ -0.34
CDHR3-207ENST00000470188 FUSP35637 526 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDHR3-207ENST00000470188 Q6ZRX8 168 aa12.91□□□□□ -0.34
CDHR3-207ENST00000470188 DEFB105AQ8NG35 78 aa12.91□□□□□ -0.34
CDHR3-207ENST00000470188 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
CDHR3-207ENST00000470188 IGLV5-48A0A075B6I7 105 aa12.9□□□□□ -0.34
CDHR3-207ENST00000470188 KRTAP4-16G5E9R7 235 aaPredicted RBP12.9□□□□□ -0.34
CDHR3-207ENST00000470188 ETDCA0A1B0GVM5 59 aa12.89□□□□□ -0.35
CDHR3-207ENST00000470188 SPRR1AP35321 89 aa12.89□□□□□ -0.35
CDHR3-207ENST00000470188 C3orf84H3BNL1 204 aa12.88□□□□□ -0.35
CDHR3-207ENST00000470188 MRPL55Q7Z7F7 128 aaKnown RBP12.88□□□□□ -0.35
CDHR3-207ENST00000470188 Q8N377 158 aa12.88□□□□□ -0.35
CDHR3-207ENST00000470188 Q9BRP9 147 aa12.87□□□□□ -0.35
CDHR3-207ENST00000470188 KRTAP1-5Q9BYS1 174 aa12.87□□□□□ -0.35
CDHR3-207ENST00000470188 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
CDHR3-207ENST00000470188 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
CDHR3-207ENST00000470188 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
CDHR3-207ENST00000470188 FAM229BQ4G0N7 80 aa12.84□□□□□ -0.35
CDHR3-207ENST00000470188 LCE6AA0A183 80 aa12.82□□□□□ -0.36
CDHR3-207ENST00000470188 PSCAO43653 123 aa12.82□□□□□ -0.36
CDHR3-207ENST00000470188 APLNQ9ULZ1 77 aa12.81□□□□□ -0.36
CDHR3-207ENST00000470188 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
CDHR3-207ENST00000470188 SMIM29Q86T20 159 aa12.8□□□□□ -0.36
CDHR3-207ENST00000470188 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
CDHR3-207ENST00000470188 STAB2Q8WWQ8 2551 aa12.79□□□□□ -0.36
CDHR3-207ENST00000470188 CNBPP62633 177 aaKnown RBP12.79□□□□□ -0.36
CDHR3-207ENST00000470188 ST20-AS1Q8NBB2 130 aa12.79□□□□□ -0.36
CDHR3-207ENST00000470188 BRK1Q8WUW1 75 aa12.79□□□□□ -0.36
CDHR3-207ENST00000470188 REG3GQ6UW15 175 aa12.78□□□□□ -0.36
CDHR3-207ENST00000470188 MPLKIPQ8TAP9 179 aa12.78□□□□□ -0.36
CDHR3-207ENST00000470188 A0A096LNI7 61 aa12.77□□□□□ -0.36
CDHR3-207ENST00000470188 A0A1W2PNM2 257 aa12.77□□□□□ -0.36
CDHR3-207ENST00000470188 UBE2BP63146 152 aa12.77□□□□□ -0.36
CDHR3-207ENST00000470188 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.36
CDHR3-207ENST00000470188 C16orf90A8MZG2 172 aa12.77□□□□□ -0.37
CDHR3-207ENST00000470188 IGKV2-24A0A0C4DH68 120 aa12.76□□□□□ -0.37
CDHR3-207ENST00000470188 TNP2Q05952 138 aa12.76□□□□□ -0.37
CDHR3-207ENST00000470188 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
CDHR3-207ENST00000470188 FAM30AQ9NZY2 134 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms