RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 U2AF2P26368 475 aaKnown RBP eCLIP23.3■■□□□ 1.322e-16■■□□□ 12.4
CDHR3-207ENST00000470188 NCBP2P52298 156 aaKnown RBP eCLIP18.97■□□□□ 0.634e-15■■■■■ 27.4
CDHR3-207ENST00000470188 QKIQ96PU8 341 aaKnown RBP eCLIP20.77■□□□□ 0.923e-11■■■■■ 45.8
CDHR3-207ENST00000470188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.37■■□□□ 1.494e-10■■□□□ 12.5
CDHR3-207ENST00000470188 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.61■□□□□ 0.574e-9■■■■□ 21.2
CDHR3-207ENST00000470188 EFTUD2Q15029 972 aaKnown RBP eCLIP20.93■□□□□ 0.948e-9■■■■□ 20.8
CDHR3-207ENST00000470188 PRPF4O43172 522 aaKnown RBP eCLIP20.96■□□□□ 0.951e-8■□□□□ 8.9
CDHR3-207ENST00000470188 DDX3XO00571 662 aaKnown RBP eCLIP21.84■■□□□ 1.092e-8■■□□□ 11.6
CDHR3-207ENST00000470188 PCBP2Q15366 365 aaKnown RBP eCLIP19.79■□□□□ 0.762e-8■■■■□ 23
CDHR3-207ENST00000470188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 22e-8■□□□□ 11
CDHR3-207ENST00000470188 RBFOX2O43251 390 aaKnown RBP eCLIP16.59■□□□□ 0.255e-8■■■■□ 23
CDHR3-207ENST00000470188 PTBP1P26599 531 aaKnown RBP eCLIP18.72■□□□□ 0.591e-7■■■■■ 27.6
CDHR3-207ENST00000470188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.15■■□□□ 1.142e-7■■■□□ 15.1
CDHR3-207ENST00000470188 RBM15Q96T37 977 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■□□□ 12
CDHR3-207ENST00000470188 HNRNPCP07910 306 aaKnown RBP eCLIP20.01■□□□□ 0.793e-7■■□□□ 11.6
CDHR3-207ENST00000470188 SRSF1Q07955 248 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■□□□ 12.4
CDHR3-207ENST00000470188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.01■■□□□ 1.114e-7■■■■■ 29.7
CDHR3-207ENST00000470188 SFPQP23246 707 aaKnown RBP eCLIP22.94■■□□□ 1.266e-7■■□□□ 12.2
CDHR3-207ENST00000470188 CSTF2P33240 577 aaKnown RBP eCLIP18.86■□□□□ 0.611e-6■■■■■ 28.9
CDHR3-207ENST00000470188 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■■■■□ 23.2
CDHR3-207ENST00000470188 HLTFQ14527 1009 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■□□□ 14.3
CDHR3-207ENST00000470188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.732e-6■■■□□ 15.6
CDHR3-207ENST00000470188 MATR3P43243 847 aaKnown RBP eCLIP21.94■■□□□ 1.12e-6■■■■□ 20.9
CDHR3-207ENST00000470188 RBM22Q9NW64 420 aaKnown RBP eCLIP20.35■□□□□ 0.853e-6■■■□□ 18.6
CDHR3-207ENST00000470188 SF3A3Q12874 501 aaKnown RBP eCLIP21.13■□□□□ 0.975e-6■■□□□ 14.3
CDHR3-207ENST00000470188 HNRNPLP14866 589 aaKnown RBP eCLIP20.15■□□□□ 0.826e-6■□□□□ 11.3
CDHR3-207ENST00000470188 HNRNPKP61978 463 aaKnown RBP eCLIP18.3■□□□□ 0.527e-6■■■■□ 19.6
Retrieved 27 of 27 RNA–protein pairs in 17.8 ms