RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CHCHD10Q8WYQ3 142 aaPredicted RBP12.11□□□□□ -0.47
SNAPC3-205ENST00000467062 REG3AQ06141 175 aa12.1□□□□□ -0.47
SNAPC3-205ENST00000467062 Q8NAQ8 132 aa12.1□□□□□ -0.47
SNAPC3-205ENST00000467062 IGHV4-30-4P0DP06 118 aa12.09□□□□□ -0.47
SNAPC3-205ENST00000467062 APOC4P55056 127 aa12.09□□□□□ -0.47
SNAPC3-205ENST00000467062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.09□□□□□ -0.47
SNAPC3-205ENST00000467062 COX7BP24311 80 aa12.09□□□□□ -0.47
SNAPC3-205ENST00000467062 FBN1P35555 2871 aaKnown RBP12.09□□□□□ -0.47
SNAPC3-205ENST00000467062 Q8N9L7 120 aa12.08□□□□□ -0.48
SNAPC3-205ENST00000467062 Q8NDZ9 215 aa12.08□□□□□ -0.48
SNAPC3-205ENST00000467062 OXLD1Q5BKU9 147 aa12.07□□□□□ -0.48
SNAPC3-205ENST00000467062 RETNQ9HD89 108 aa12.07□□□□□ -0.48
SNAPC3-205ENST00000467062 LRCOL1A6NCL2 159 aa12.06□□□□□ -0.48
SNAPC3-205ENST00000467062 IGLV6-57P01721 117 aa12.06□□□□□ -0.48
SNAPC3-205ENST00000467062 KIAA0087Q14695 138 aa12.06□□□□□ -0.48
SNAPC3-205ENST00000467062 TENM3Q9P273 2699 aa12.06□□□□□ -0.48
SNAPC3-205ENST00000467062 C1orf64Q8NEQ6 169 aa12.06□□□□□ -0.48
SNAPC3-205ENST00000467062 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
SNAPC3-205ENST00000467062 KLK12Q9UKR0 248 aa12.04□□□□□ -0.48
SNAPC3-205ENST00000467062 PSPHP1O15172 72 aa12.04□□□□□ -0.48
SNAPC3-205ENST00000467062 C10orf25Q5T742 122 aa12.04□□□□□ -0.48
SNAPC3-205ENST00000467062 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
SNAPC3-205ENST00000467062 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
SNAPC3-205ENST00000467062 MAST4O15021 2626 aa12.03□□□□□ -0.48
SNAPC3-205ENST00000467062 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.48
SNAPC3-205ENST00000467062 UNQ6190/PRO20217Q6UXQ8 127 aa12.01□□□□□ -0.49
SNAPC3-205ENST00000467062 MRPL55Q7Z7F7 128 aaKnown RBP12□□□□□ -0.49
SNAPC3-205ENST00000467062 LCE6AA0A183 80 aa11.99□□□□□ -0.49
SNAPC3-205ENST00000467062 FAM30AQ9NZY2 134 aa11.97□□□□□ -0.49
SNAPC3-205ENST00000467062 HIGD2BQ4VC39 106 aa11.96□□□□□ -0.49
SNAPC3-205ENST00000467062 KRTAP10-11P60412 298 aa11.95□□□□□ -0.5
SNAPC3-205ENST00000467062 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
SNAPC3-205ENST00000467062 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
SNAPC3-205ENST00000467062 LELP1Q5T871 98 aa11.95□□□□□ -0.5
SNAPC3-205ENST00000467062 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
SNAPC3-205ENST00000467062 UBE2BP63146 152 aa11.94□□□□□ -0.5
SNAPC3-205ENST00000467062 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
SNAPC3-205ENST00000467062 ZNF73O43830 326 aaPredicted RBP11.93□□□□□ -0.5
SNAPC3-205ENST00000467062 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
SNAPC3-205ENST00000467062 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
SNAPC3-205ENST00000467062 ZCCHC13Q8WW36 166 aaKnown RBP11.92□□□□□ -0.5
SNAPC3-205ENST00000467062 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
SNAPC3-205ENST00000467062 PSCAO43653 123 aa11.91□□□□□ -0.5
SNAPC3-205ENST00000467062 XAGE1AQ9HD64 81 aa11.91□□□□□ -0.5
SNAPC3-205ENST00000467062 A8MUN3 132 aa11.9□□□□□ -0.5
SNAPC3-205ENST00000467062 KTN1-AS1Q86SY8 53 aa11.9□□□□□ -0.5
SNAPC3-205ENST00000467062 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
SNAPC3-205ENST00000467062 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
SNAPC3-205ENST00000467062 PRR34Q9NV39 138 aa11.88□□□□□ -0.51
SNAPC3-205ENST00000467062 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
SNAPC3-205ENST00000467062 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
SNAPC3-205ENST00000467062 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
SNAPC3-205ENST00000467062 ETDCA0A1B0GVM5 59 aa11.86□□□□□ -0.51
SNAPC3-205ENST00000467062 UBE2AP49459 152 aa11.86□□□□□ -0.51
SNAPC3-205ENST00000467062 LINC00588Q9Y4M8 146 aa11.85□□□□□ -0.51
SNAPC3-205ENST00000467062 CMYA5Q8N3K9 4069 aa11.85□□□□□ -0.51
SNAPC3-205ENST00000467062 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
SNAPC3-205ENST00000467062 Q5VV11 94 aa11.84□□□□□ -0.51
SNAPC3-205ENST00000467062 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
SNAPC3-205ENST00000467062 NDUFB1O75438 58 aa11.83□□□□□ -0.52
SNAPC3-205ENST00000467062 KRTAP24-1Q3LI83 254 aa11.83□□□□□ -0.52
SNAPC3-205ENST00000467062 PRB2P02812 416 aaPredicted RBP11.82□□□□□ -0.52
SNAPC3-205ENST00000467062 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
SNAPC3-205ENST00000467062 A0A1B0GW54 56 aa11.82□□□□□ -0.52
SNAPC3-205ENST00000467062 PRR4Q16378 134 aa11.8□□□□□ -0.52
SNAPC3-205ENST00000467062 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
SNAPC3-205ENST00000467062 GVQW2A0A096LPI5 108 aaPredicted RBP11.79□□□□□ -0.52
SNAPC3-205ENST00000467062 A8MU10 97 aa11.79□□□□□ -0.52
SNAPC3-205ENST00000467062 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
SNAPC3-205ENST00000467062 NDUFS5O43920 106 aa11.78□□□□□ -0.52
SNAPC3-205ENST00000467062 LIMD2Q9BT23 127 aa11.78□□□□□ -0.52
SNAPC3-205ENST00000467062 CAMK2N2Q96S95 79 aa11.77□□□□□ -0.53
SNAPC3-205ENST00000467062 M0R378 163 aa11.76□□□□□ -0.53
SNAPC3-205ENST00000467062 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
SNAPC3-205ENST00000467062 ATP11AUNQ6ZP68 121 aa11.75□□□□□ -0.53
SNAPC3-205ENST00000467062 B9D2Q9BPU9 175 aa11.74□□□□□ -0.53
SNAPC3-205ENST00000467062 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
SNAPC3-205ENST00000467062 KRTAP26-1Q6PEX3 210 aa11.74□□□□□ -0.53
SNAPC3-205ENST00000467062 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
SNAPC3-205ENST00000467062 IGLV5-48A0A075B6I7 105 aa11.73□□□□□ -0.53
SNAPC3-205ENST00000467062 IGKV2D-24A0A075B6R9 120 aa11.73□□□□□ -0.53
SNAPC3-205ENST00000467062 SPTSSBQ8NFR3 76 aa11.73□□□□□ -0.53
SNAPC3-205ENST00000467062 ST20-AS1Q8NBB2 130 aa11.72□□□□□ -0.53
SNAPC3-205ENST00000467062 VPREB1P12018 145 aa11.72□□□□□ -0.53
SNAPC3-205ENST00000467062 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
SNAPC3-205ENST00000467062 HCG22E2RYF7 251 aa11.71□□□□□ -0.53
SNAPC3-205ENST00000467062 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.53
SNAPC3-205ENST00000467062 Q8N9P0 234 aaPredicted RBP11.71□□□□□ -0.54
SNAPC3-205ENST00000467062 BAHCC1Q9P281 2608 aa11.7□□□□□ -0.54
SNAPC3-205ENST00000467062 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
SNAPC3-205ENST00000467062 EGFEM1PQ0D2K5 195 aa11.69□□□□□ -0.54
SNAPC3-205ENST00000467062 PRR15LQ9BU68 103 aa11.69□□□□□ -0.54
SNAPC3-205ENST00000467062 LYSTQ99698 3801 aa11.68□□□□□ -0.54
SNAPC3-205ENST00000467062 MP68P56378 58 aa11.68□□□□□ -0.54
SNAPC3-205ENST00000467062 DSCR10P59022 87 aa11.67□□□□□ -0.54
SNAPC3-205ENST00000467062 DEFB105AQ8NG35 78 aa11.67□□□□□ -0.54
SNAPC3-205ENST00000467062 H3BNG1 76 aa11.67□□□□□ -0.54
SNAPC3-205ENST00000467062 Q8N377 158 aa11.66□□□□□ -0.54
SNAPC3-205ENST00000467062 LINC00208Q96KT6 92 aa11.66□□□□□ -0.54
SNAPC3-205ENST00000467062 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms