RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
HPS4-209ENST00000466781 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
HPS4-209ENST00000466781 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
HPS4-209ENST00000466781 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
HPS4-209ENST00000466781 NCOR2Q9Y618 2525 aa5.82□□□□□ -1.48
HPS4-209ENST00000466781 HIVEP3Q5T1R4 2406 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 CELSR3Q9NYQ7 3312 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 VPREB1P12018 145 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 OBSCN-AS1Q96MR7 158 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 TM2D3Q9BRN9 247 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 C19orf73Q9NVV2 129 aa5.81□□□□□ -1.48
HPS4-209ENST00000466781 KLK9Q2XQG4 91 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 WDR87Q6ZQQ6 2873 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 K7EQZ3 153 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 COA5Q86WW8 74 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 F8P00451 2351 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 KRTAP1-1Q07627 177 aa5.8□□□□□ -1.48
HPS4-209ENST00000466781 CSPG4Q6UVK1 2322 aa5.79□□□□□ -1.48
HPS4-209ENST00000466781 DCHS1Q96JQ0 3298 aa5.79□□□□□ -1.48
HPS4-209ENST00000466781 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
HPS4-209ENST00000466781 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
HPS4-209ENST00000466781 LINC00336Q6ZUF6 198 aa5.79□□□□□ -1.48
HPS4-209ENST00000466781 NAV3Q8IVL0 2385 aa5.79□□□□□ -1.48
HPS4-209ENST00000466781 ZNF861PO60384 105 aa5.78□□□□□ -1.48
HPS4-209ENST00000466781 MUC4Q99102 2169 aa5.78□□□□□ -1.48
HPS4-209ENST00000466781 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
HPS4-209ENST00000466781 UQCR11O14957 56 aa5.78□□□□□ -1.48
HPS4-209ENST00000466781 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
HPS4-209ENST00000466781 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
HPS4-209ENST00000466781 A0A087WTM6 91 aa5.76□□□□□ -1.49
HPS4-209ENST00000466781 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
HPS4-209ENST00000466781 ABCA2Q9BZC7 2435 aa5.76□□□□□ -1.49
HPS4-209ENST00000466781 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
HPS4-209ENST00000466781 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
HPS4-209ENST00000466781 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
HPS4-209ENST00000466781 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
HPS4-209ENST00000466781 CSNK1G2-AS1Q8NCQ2 148 aa5.73□□□□□ -1.49
HPS4-209ENST00000466781 NAV2Q8IVL1 2488 aa5.73□□□□□ -1.49
HPS4-209ENST00000466781 IGLV7-43P04211 117 aa5.73□□□□□ -1.49
HPS4-209ENST00000466781 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
HPS4-209ENST00000466781 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
HPS4-209ENST00000466781 C15orf56Q8N910 161 aa5.72□□□□□ -1.49
HPS4-209ENST00000466781 PIEZO1Q92508 2521 aa5.72□□□□□ -1.49
HPS4-209ENST00000466781 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
HPS4-209ENST00000466781 RPS28P62857 69 aaKnown RBP5.72□□□□□ -1.49
HPS4-209ENST00000466781 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
HPS4-209ENST00000466781 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
HPS4-209ENST00000466781 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
HPS4-209ENST00000466781 DMXL1Q9Y485 3027 aa5.71□□□□□ -1.5
HPS4-209ENST00000466781 FRYQ5TBA9 3013 aa5.7□□□□□ -1.5
HPS4-209ENST00000466781 LITAFQ99732 161 aa5.7□□□□□ -1.5
HPS4-209ENST00000466781 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
HPS4-209ENST00000466781 A8MUN3 132 aa5.69□□□□□ -1.5
HPS4-209ENST00000466781 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
HPS4-209ENST00000466781 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
HPS4-209ENST00000466781 A0A0D9SG42 100 aa5.68□□□□□ -1.5
HPS4-209ENST00000466781 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
HPS4-209ENST00000466781 FN1P02751 2386 aaKnown RBP5.68□□□□□ -1.5
HPS4-209ENST00000466781 PRR34Q9NV39 138 aa5.67□□□□□ -1.5
HPS4-209ENST00000466781 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
HPS4-209ENST00000466781 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
HPS4-209ENST00000466781 Q6ZSA8 131 aa5.66□□□□□ -1.5
HPS4-209ENST00000466781 Q8N377 158 aa5.66□□□□□ -1.5
HPS4-209ENST00000466781 SPRR4Q96PI1 79 aa5.65□□□□□ -1.5
HPS4-209ENST00000466781 IGLV5-48A0A075B6I7 105 aa5.65□□□□□ -1.51
HPS4-209ENST00000466781 SMG1Q96Q15 3661 aaKnown RBP5.64□□□□□ -1.51
HPS4-209ENST00000466781 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
HPS4-209ENST00000466781 M0R2T5 61 aa5.64□□□□□ -1.51
HPS4-209ENST00000466781 A0A0G2JQZ4 141 aa5.64□□□□□ -1.51
HPS4-209ENST00000466781 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
HPS4-209ENST00000466781 Q8N1X5 172 aa5.63□□□□□ -1.51
HPS4-209ENST00000466781 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
HPS4-209ENST00000466781 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
HPS4-209ENST00000466781 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
HPS4-209ENST00000466781 CASC10Q5T4H9 136 aa5.61□□□□□ -1.51
HPS4-209ENST00000466781 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
HPS4-209ENST00000466781 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
HPS4-209ENST00000466781 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
HPS4-209ENST00000466781 ZNF462Q96JM2 2506 aa5.59□□□□□ -1.51
HPS4-209ENST00000466781 LUZP6Q538Z0 58 aa5.59□□□□□ -1.52
HPS4-209ENST00000466781 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.52
HPS4-209ENST00000466781 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
HPS4-209ENST00000466781 RELNP78509 3460 aa5.56□□□□□ -1.52
HPS4-209ENST00000466781 LRRK2Q5S007 2527 aa5.56□□□□□ -1.52
HPS4-209ENST00000466781 TLN1Q9Y490 2541 aaKnown RBP5.56□□□□□ -1.52
HPS4-209ENST00000466781 VPS13CQ709C8 3753 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 C2CD3Q4AC94 2353 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 CD164Q04900 197 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 ANKRD11Q6UB99 2663 aaPredicted RBP5.55□□□□□ -1.52
HPS4-209ENST00000466781 JMJD1CQ15652 2540 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 TNP2Q05952 138 aa5.55□□□□□ -1.52
HPS4-209ENST00000466781 SPANXA2-OT1Q8N9U9 137 aa5.54□□□□□ -1.52
HPS4-209ENST00000466781 CR1P17927 2039 aa5.54□□□□□ -1.52
HPS4-209ENST00000466781 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
HPS4-209ENST00000466781 ANKRD17O75179 2603 aaKnown RBP5.52□□□□□ -1.53
HPS4-209ENST00000466781 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms