RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
PMF1-204ENST00000466489 RTL8CO15255 209 aa6.66□□□□□ -1.34
PMF1-204ENST00000466489 CXCL6P80162 114 aa6.66□□□□□ -1.34
PMF1-204ENST00000466489 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
PMF1-204ENST00000466489 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
PMF1-204ENST00000466489 SPAG11BQ08648 103 aa6.65□□□□□ -1.34
PMF1-204ENST00000466489 Q8N3U1 123 aa6.65□□□□□ -1.34
PMF1-204ENST00000466489 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.34
PMF1-204ENST00000466489 J3KT08 172 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 NDUFC1O43677 76 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 DIRC1Q969H9 104 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 C22orf24Q9Y442 160 aa6.64□□□□□ -1.35
PMF1-204ENST00000466489 C6orf99Q4VX62 202 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 CLPSL2Q6UWE3 100 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 RYR2Q92736 4967 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 LINC00846Q9NV44 126 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 LAMTOR3Q9UHA4 124 aa6.63□□□□□ -1.35
PMF1-204ENST00000466489 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 M0R378 163 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 TNP2Q05952 138 aa6.62□□□□□ -1.35
PMF1-204ENST00000466489 Q6ZRN7 208 aaPredicted RBP6.62□□□□□ -1.35
PMF1-204ENST00000466489 NCR3O14931 201 aa6.61□□□□□ -1.35
PMF1-204ENST00000466489 C14orf177Q52M58 125 aa6.61□□□□□ -1.35
PMF1-204ENST00000466489 ENHOQ6UWT2 76 aa6.61□□□□□ -1.35
PMF1-204ENST00000466489 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
PMF1-204ENST00000466489 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
PMF1-204ENST00000466489 IGLV10-54A0A075B6I4 117 aa6.59□□□□□ -1.35
PMF1-204ENST00000466489 A0A087WTM6 91 aa6.59□□□□□ -1.35
PMF1-204ENST00000466489 COX7BP24311 80 aa6.59□□□□□ -1.35
PMF1-204ENST00000466489 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
PMF1-204ENST00000466489 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
PMF1-204ENST00000466489 Q6ZQT0 140 aa6.58□□□□□ -1.36
PMF1-204ENST00000466489 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
PMF1-204ENST00000466489 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
PMF1-204ENST00000466489 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
PMF1-204ENST00000466489 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
PMF1-204ENST00000466489 DHRS4-AS1Q9P1J3 65 aa6.56□□□□□ -1.36
PMF1-204ENST00000466489 FRAS1Q86XX4 4008 aa6.56□□□□□ -1.36
PMF1-204ENST00000466489 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 LRCOL1A6NCL2 159 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 ELOF1P60002 83 aaKnown RBP6.55□□□□□ -1.36
PMF1-204ENST00000466489 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 PKIGQ9Y2B9 76 aa6.55□□□□□ -1.36
PMF1-204ENST00000466489 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
PMF1-204ENST00000466489 C16orf90A8MZG2 172 aa6.54□□□□□ -1.36
PMF1-204ENST00000466489 SLPIP03973 132 aa6.54□□□□□ -1.36
PMF1-204ENST00000466489 Q6ZQY7 126 aa6.53□□□□□ -1.36
PMF1-204ENST00000466489 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
PMF1-204ENST00000466489 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
PMF1-204ENST00000466489 TRBV7-4A0A0J9YYF1 115 aa6.51□□□□□ -1.37
PMF1-204ENST00000466489 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
PMF1-204ENST00000466489 HAMPP81172 84 aa6.51□□□□□ -1.37
PMF1-204ENST00000466489 HIGD2BQ4VC39 106 aa6.51□□□□□ -1.37
PMF1-204ENST00000466489 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
PMF1-204ENST00000466489 NKAPP1Q8N9T2 125 aa6.51□□□□□ -1.37
PMF1-204ENST00000466489 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
PMF1-204ENST00000466489 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
PMF1-204ENST00000466489 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
PMF1-204ENST00000466489 Q6ZVQ6 151 aa6.5□□□□□ -1.37
PMF1-204ENST00000466489 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
PMF1-204ENST00000466489 C6orf48Q9UBA6 75 aa6.5□□□□□ -1.37
PMF1-204ENST00000466489 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
PMF1-204ENST00000466489 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
PMF1-204ENST00000466489 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
PMF1-204ENST00000466489 KLKP1Q107X0 134 aa6.49□□□□□ -1.37
PMF1-204ENST00000466489 VPREB1P12018 145 aa6.48□□□□□ -1.37
PMF1-204ENST00000466489 NREPQ16612 68 aa6.48□□□□□ -1.37
PMF1-204ENST00000466489 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
PMF1-204ENST00000466489 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 PRYO14603 147 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 C9orf129Q5T035 196 aaKnown RBP6.47□□□□□ -1.37
PMF1-204ENST00000466489 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 LINC00528Q8N1L1 170 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 DPH3Q96FX2 82 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
PMF1-204ENST00000466489 DNAH17Q9UFH2 4485 aa6.46□□□□□ -1.37
PMF1-204ENST00000466489 IGLV5-37A0A075B6J1 123 aa6.46□□□□□ -1.38
PMF1-204ENST00000466489 CNBPP62633 177 aaKnown RBP6.46□□□□□ -1.38
PMF1-204ENST00000466489 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.38
PMF1-204ENST00000466489 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
PMF1-204ENST00000466489 SERP1Q9Y6X1 66 aa6.45□□□□□ -1.38
PMF1-204ENST00000466489 IGLV5-48A0A075B6I7 105 aa6.44□□□□□ -1.38
PMF1-204ENST00000466489 BPY2O14599 106 aa6.43□□□□□ -1.38
PMF1-204ENST00000466489 C9orf163Q8N9P6 203 aa6.43□□□□□ -1.38
PMF1-204ENST00000466489 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
PMF1-204ENST00000466489 A0A087WVE0 104 aa6.42□□□□□ -1.38
PMF1-204ENST00000466489 FAM236DA0A1B0GTK5 79 aa6.42□□□□□ -1.38
PMF1-204ENST00000466489 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
PMF1-204ENST00000466489 CDK2AP2O75956 126 aa6.42□□□□□ -1.38
PMF1-204ENST00000466489 FAM236CP0DP71 79 aa6.42□□□□□ -1.38
PMF1-204ENST00000466489 PKD1P98161 4303 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms