RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
ITGB1-208ENST00000464001 UBL5Q9BZL1 73 aa1.18□□□□□ -2.22
ITGB1-208ENST00000464001 FANCD2Q9BXW9 1451 aa1.18□□□□□ -2.22
ITGB1-208ENST00000464001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.221e-6■■□□□ 14.5
ITGB1-208ENST00000464001 CNOT1A5YKK6 2376 aaKnown RBP1.17□□□□□ -2.22
ITGB1-208ENST00000464001 I3L3M4 83 aa1.17□□□□□ -2.22
ITGB1-208ENST00000464001 COX6A2Q02221 97 aa1.17□□□□□ -2.22
ITGB1-208ENST00000464001 NRXN3Q9Y4C0 1643 aa1.17□□□□□ -2.22
ITGB1-208ENST00000464001 ASH1LQ9NR48 2969 aaKnown RBP1.16□□□□□ -2.22
ITGB1-208ENST00000464001 K7EMI3 77 aa1.16□□□□□ -2.22
ITGB1-208ENST00000464001 USMG5Q96IX5 58 aa1.16□□□□□ -2.22
ITGB1-208ENST00000464001 MRPL34Q9BQ48 92 aaKnown RBP1.16□□□□□ -2.22
ITGB1-208ENST00000464001 FCER1GP30273 86 aa1.15□□□□□ -2.23
ITGB1-208ENST00000464001 Q8IZM0 81 aa1.15□□□□□ -2.23
ITGB1-208ENST00000464001 FXYD6Q9H0Q3 95 aa1.15□□□□□ -2.23
ITGB1-208ENST00000464001 KCNQ1DNQ9H478 68 aa1.15□□□□□ -2.23
ITGB1-208ENST00000464001 PTPRZ1P23471 2315 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-208ENST00000464001 ABCA5Q8WWZ7 1642 aa1.15□□□□□ -2.23
ITGB1-208ENST00000464001 ZNF462Q96JM2 2506 aa1.14□□□□□ -2.23
ITGB1-208ENST00000464001 PTPRQQ9UMZ3 2332 aa1.14□□□□□ -2.23
ITGB1-208ENST00000464001 PRB3Q04118 309 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-208ENST00000464001 HELZ2Q9BYK8 2649 aaKnown RBP1.13□□□□□ -2.23
ITGB1-208ENST00000464001 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
ITGB1-208ENST00000464001 LELP1Q5T871 98 aa1.12□□□□□ -2.23
ITGB1-208ENST00000464001 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
ITGB1-208ENST00000464001 ADCY10Q96PN6 1610 aa1.11□□□□□ -2.23
ITGB1-208ENST00000464001 COX6B1P14854 86 aa1.11□□□□□ -2.23
ITGB1-208ENST00000464001 ETDCA0A1B0GVM5 59 aa1.1□□□□□ -2.23
ITGB1-208ENST00000464001 M0R1W7 72 aa1.1□□□□□ -2.23
ITGB1-208ENST00000464001 SPRR1AP35321 89 aa1.1□□□□□ -2.23
ITGB1-208ENST00000464001 NDUFA3O95167 84 aa1.09□□□□□ -2.23
ITGB1-208ENST00000464001 DEFB114Q30KQ6 69 aa1.09□□□□□ -2.23
ITGB1-208ENST00000464001 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 DEFB131BA0A096LNP1 70 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 CRIP1P50238 77 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 NCBP2-AS2Q69YL0 99 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 APLNQ9ULZ1 77 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 AGLP35573 1532 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 EFCAB6Q5THR3 1501 aa1.08□□□□□ -2.24
ITGB1-208ENST00000464001 CDC42BPAQ5VT25 1732 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 DDX60Q8IY21 1712 aaKnown RBP1.07□□□□□ -2.24
ITGB1-208ENST00000464001 TOP2AP11388 1531 aaKnown RBP1.07□□□□□ -2.24
ITGB1-208ENST00000464001 SNRPGP15A8MWD9 76 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 CCL22O00626 93 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 Q5VSD8 79 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 ABCC8Q09428 1581 aa1.07□□□□□ -2.24
ITGB1-208ENST00000464001 MRPL33O75394 65 aaKnown RBP1.06□□□□□ -2.24
ITGB1-208ENST00000464001 SPRR1BP22528 89 aa1.06□□□□□ -2.24
ITGB1-208ENST00000464001 H1FX-AS1Q4G0G2 97 aa1.06□□□□□ -2.24
ITGB1-208ENST00000464001 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
ITGB1-208ENST00000464001 PRO3102Q9H379 93 aa1.06□□□□□ -2.24
ITGB1-208ENST00000464001 BPTFQ12830 3046 aa1.06□□□□□ -2.24
ITGB1-208ENST00000464001 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
ITGB1-208ENST00000464001 NMES1Q9C002 83 aa1.05□□□□□ -2.24
ITGB1-208ENST00000464001 CDKN2A-AS1Q9UH64 79 aa1.05□□□□□ -2.24
ITGB1-208ENST00000464001 TTC28Q96AY4 2481 aa1.05□□□□□ -2.24
ITGB1-208ENST00000464001 IQGAP1P46940 1657 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 IGIPA6NJ69 53 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 COX6B2Q6YFQ2 88 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 IQGAP2Q13576 1575 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 DEPDC5O75140 1603 aa1.04□□□□□ -2.24
ITGB1-208ENST00000464001 LOC730098B7Z3J9 87 aa1.03□□□□□ -2.24
ITGB1-208ENST00000464001 H0YAA0 97 aa1.03□□□□□ -2.24
ITGB1-208ENST00000464001 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
ITGB1-208ENST00000464001 KIAA0586Q9BVV6 1533 aa1.02□□□□□ -2.25
ITGB1-208ENST00000464001 FAM208AQ9UK61 1670 aaKnown RBP1.02□□□□□ -2.25
ITGB1-208ENST00000464001 LINC00158P58513 81 aa1.01□□□□□ -2.25
ITGB1-208ENST00000464001 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
ITGB1-208ENST00000464001 SERF2P84101 59 aa1□□□□□ -2.25
ITGB1-208ENST00000464001 F8P00451 2351 aa1□□□□□ -2.25
ITGB1-208ENST00000464001 LMO7Q8WWI1 1683 aa1□□□□□ -2.25
ITGB1-208ENST00000464001 SPTBN1Q01082 2364 aaKnown RBP0.99□□□□□ -2.25
ITGB1-208ENST00000464001 POLQO75417 2590 aa0.98□□□□□ -2.25
ITGB1-208ENST00000464001 CMC2Q9NRP2 79 aa0.98□□□□□ -2.25
ITGB1-208ENST00000464001 KNL1Q8NG31 2342 aa0.97□□□□□ -2.25
ITGB1-208ENST00000464001 PRH1P02810 166 aa0.97□□□□□ -2.25
ITGB1-208ENST00000464001 ZNF292O60281 2723 aa0.96□□□□□ -2.26
ITGB1-208ENST00000464001 PLNP26678 52 aa0.96□□□□□ -2.26
ITGB1-208ENST00000464001 PKDREJQ9NTG1 2253 aa0.96□□□□□ -2.26
ITGB1-208ENST00000464001 GVINP1Q7Z2Y8 2422 aa0.95□□□□□ -2.26
ITGB1-208ENST00000464001 LYNX1G3V0Z9 82 aa0.94□□□□□ -2.26
ITGB1-208ENST00000464001 TOMM5Q8N4H5 51 aa0.93□□□□□ -2.26
ITGB1-208ENST00000464001 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
ITGB1-208ENST00000464001 CELSR2Q9HCU4 2923 aa0.93□□□□□ -2.26
ITGB1-208ENST00000464001 IAPPP10997 89 aa0.92□□□□□ -2.26
ITGB1-208ENST00000464001 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
ITGB1-208ENST00000464001 MINOS1Q5TGZ0 78 aa0.92□□□□□ -2.26
ITGB1-208ENST00000464001 SPINK4O60575 86 aa0.91□□□□□ -2.26
ITGB1-208ENST00000464001 DEFB130BP0DP73 79 aa0.91□□□□□ -2.26
ITGB1-208ENST00000464001 DEFB130AP0DP74 79 aa0.91□□□□□ -2.26
ITGB1-208ENST00000464001 ABCA12Q86UK0 2595 aa0.9□□□□□ -2.27
ITGB1-208ENST00000464001 SMIM27A0A1W2PRY6 76 aa0.9□□□□□ -2.27
ITGB1-208ENST00000464001 H0YGX0 51 aa0.9□□□□□ -2.27
ITGB1-208ENST00000464001 ABRACLQ9P1F3 81 aa0.9□□□□□ -2.27
ITGB1-208ENST00000464001 TIMM8BQ9Y5J9 83 aaPredicted RBP0.9□□□□□ -2.27
ITGB1-208ENST00000464001 NCOR1O75376 2440 aa0.9□□□□□ -2.27
ITGB1-208ENST00000464001 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 269.8 ms