RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 LEPROTO15243 131 aa9.34□□□□□ -0.91
HMGN1-209ENST00000463631 SPRR1BP22528 89 aa9.34□□□□□ -0.91
HMGN1-209ENST00000463631 COMMD7Q86VX2 200 aa9.34□□□□□ -0.91
HMGN1-209ENST00000463631 NMUP48645 174 aa9.33□□□□□ -0.92
HMGN1-209ENST00000463631 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
HMGN1-209ENST00000463631 J3QQQ9 107 aa9.32□□□□□ -0.92
HMGN1-209ENST00000463631 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
HMGN1-209ENST00000463631 PLNP26678 52 aa9.3□□□□□ -0.92
HMGN1-209ENST00000463631 HSBP1O75506 76 aa9.29□□□□□ -0.92
HMGN1-209ENST00000463631 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
HMGN1-209ENST00000463631 CBY1Q9Y3M2 126 aa9.29□□□□□ -0.92
HMGN1-209ENST00000463631 LCE2BO14633 110 aa9.27□□□□□ -0.93
HMGN1-209ENST00000463631 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-209ENST00000463631 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-209ENST00000463631 CD164Q04900 197 aa9.27□□□□□ -0.93
HMGN1-209ENST00000463631 H0Y8G0 127 aa9.26□□□□□ -0.93
HMGN1-209ENST00000463631 HERVK_113P61574 105 aa9.26□□□□□ -0.93
HMGN1-209ENST00000463631 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
HMGN1-209ENST00000463631 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
HMGN1-209ENST00000463631 FLGP20930 4061 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-209ENST00000463631 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
HMGN1-209ENST00000463631 YPEL4Q96NS1 127 aa9.25□□□□□ -0.93
HMGN1-209ENST00000463631 LAMTOR3Q9UHA4 124 aa9.25□□□□□ -0.93
HMGN1-209ENST00000463631 M0R2T5 61 aa9.24□□□□□ -0.93
HMGN1-209ENST00000463631 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-209ENST00000463631 Q5XG85 94 aa9.24□□□□□ -0.93
HMGN1-209ENST00000463631 DPM2O94777 84 aa9.23□□□□□ -0.93
HMGN1-209ENST00000463631 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
HMGN1-209ENST00000463631 SNAPINO95295 136 aa9.23□□□□□ -0.93
HMGN1-209ENST00000463631 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
HMGN1-209ENST00000463631 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
HMGN1-209ENST00000463631 APOC3P02656 99 aa9.22□□□□□ -0.93
HMGN1-209ENST00000463631 SVBPQ8N300 66 aa9.22□□□□□ -0.93
HMGN1-209ENST00000463631 NPC2P61916 151 aa9.21□□□□□ -0.94
HMGN1-209ENST00000463631 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
HMGN1-209ENST00000463631 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
HMGN1-209ENST00000463631 COX6B2Q6YFQ2 88 aa9.2□□□□□ -0.94
HMGN1-209ENST00000463631 IGKCP01834 107 aa9.19□□□□□ -0.94
HMGN1-209ENST00000463631 LINC00310P59036 64 aa9.19□□□□□ -0.94
HMGN1-209ENST00000463631 PRO1933Q9H354 126 aa9.19□□□□□ -0.94
HMGN1-209ENST00000463631 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
HMGN1-209ENST00000463631 NDUFA5Q16718 116 aa9.18□□□□□ -0.94
HMGN1-209ENST00000463631 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
HMGN1-209ENST00000463631 H7C2G1 150 aa9.17□□□□□ -0.94
HMGN1-209ENST00000463631 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
HMGN1-209ENST00000463631 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
HMGN1-209ENST00000463631 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
HMGN1-209ENST00000463631 E9PLD3 99 aa9.16□□□□□ -0.94
HMGN1-209ENST00000463631 SERF1AO75920 110 aa9.16□□□□□ -0.94
HMGN1-209ENST00000463631 Q1RN00 199 aa9.16□□□□□ -0.94
HMGN1-209ENST00000463631 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
HMGN1-209ENST00000463631 LITAFQ99732 161 aa9.16□□□□□ -0.94
HMGN1-209ENST00000463631 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
HMGN1-209ENST00000463631 TEX49A0A1B0GTD5 131 aa9.14□□□□□ -0.95
HMGN1-209ENST00000463631 COX7BP24311 80 aa9.14□□□□□ -0.95
HMGN1-209ENST00000463631 AKR1D1P51857 326 aa9.13□□□□□ -0.95
HMGN1-209ENST00000463631 TAL2Q16559 108 aa9.13□□□□□ -0.95
HMGN1-209ENST00000463631 TIMM17BO60830 172 aa9.12□□□□□ -0.95
HMGN1-209ENST00000463631 C6orf99Q4VX62 202 aa9.12□□□□□ -0.95
HMGN1-209ENST00000463631 SMIM29Q86T20 159 aa9.12□□□□□ -0.95
HMGN1-209ENST00000463631 FABP4P15090 132 aa9.11□□□□□ -0.95
HMGN1-209ENST00000463631 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
HMGN1-209ENST00000463631 TRGC2P03986 189 aa9.1□□□□□ -0.95
HMGN1-209ENST00000463631 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
HMGN1-209ENST00000463631 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
HMGN1-209ENST00000463631 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
HMGN1-209ENST00000463631 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
HMGN1-209ENST00000463631 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-209ENST00000463631 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
HMGN1-209ENST00000463631 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
HMGN1-209ENST00000463631 TCL1BO95988 128 aa9.03□□□□□ -0.96
HMGN1-209ENST00000463631 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
HMGN1-209ENST00000463631 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
HMGN1-209ENST00000463631 A4D1N5 150 aa8.98□□□□□ -0.97
HMGN1-209ENST00000463631 CFC1P0CG37 223 aa8.98□□□□□ -0.97
HMGN1-209ENST00000463631 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
HMGN1-209ENST00000463631 Q75L30 129 aa8.96□□□□□ -0.98
HMGN1-209ENST00000463631 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
HMGN1-209ENST00000463631 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
HMGN1-209ENST00000463631 USH2AO75445 5202 aa8.95□□□□□ -0.98
HMGN1-209ENST00000463631 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
HMGN1-209ENST00000463631 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
HMGN1-209ENST00000463631 Q6Q795 121 aa8.94□□□□□ -0.98
HMGN1-209ENST00000463631 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
HMGN1-209ENST00000463631 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
HMGN1-209ENST00000463631 A6NDN8 102 aa8.92□□□□□ -0.98
HMGN1-209ENST00000463631 IFITM1P13164 125 aa8.92□□□□□ -0.98
HMGN1-209ENST00000463631 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
HMGN1-209ENST00000463631 F8WEM9 126 aa8.91□□□□□ -0.98
HMGN1-209ENST00000463631 SCGB1D4Q6XE38 83 aa8.9□□□□□ -0.98
HMGN1-209ENST00000463631 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
HMGN1-209ENST00000463631 OBSCN-AS1Q96MR7 158 aa8.9□□□□□ -0.98
HMGN1-209ENST00000463631 TRBV7-7A0A0K0K1E9 115 aa8.89□□□□□ -0.99
HMGN1-209ENST00000463631 COLCA2A8K830 154 aa8.89□□□□□ -0.99
HMGN1-209ENST00000463631 Q6JHZ5 121 aa8.89□□□□□ -0.99
HMGN1-209ENST00000463631 Q6ZVH6 145 aa8.89□□□□□ -0.99
HMGN1-209ENST00000463631 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
HMGN1-209ENST00000463631 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
HMGN1-209ENST00000463631 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
HMGN1-209ENST00000463631 C20orf202A1L168 122 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms