RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 NPC2P61916 151 aa13.2□□□□□ -0.3
PDLIM7-206ENST00000463411 Q8NDZ9 215 aa13.2□□□□□ -0.3
PDLIM7-206ENST00000463411 HIST1H4GQ99525 98 aa13.2□□□□□ -0.3
PDLIM7-206ENST00000463411 UBE2AP49459 152 aa13.19□□□□□ -0.3
PDLIM7-206ENST00000463411 MUSTN1Q8IVN3 82 aa13.19□□□□□ -0.3
PDLIM7-206ENST00000463411 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
PDLIM7-206ENST00000463411 RNF213Q63HN8 5207 aa13.17□□□□□ -0.3
PDLIM7-206ENST00000463411 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
PDLIM7-206ENST00000463411 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
PDLIM7-206ENST00000463411 CRYGAP11844 174 aa13.16□□□□□ -0.3
PDLIM7-206ENST00000463411 HSD52Q0P140 79 aa13.15□□□□□ -0.3
PDLIM7-206ENST00000463411 PRR4Q16378 134 aa13.15□□□□□ -0.3
PDLIM7-206ENST00000463411 M0R378 163 aa13.14□□□□□ -0.31
PDLIM7-206ENST00000463411 TYMSOSQ8TAI1 123 aa13.13□□□□□ -0.31
PDLIM7-206ENST00000463411 A0A087X002 238 aa13.12□□□□□ -0.31
PDLIM7-206ENST00000463411 CEND1Q8N111 149 aa13.12□□□□□ -0.31
PDLIM7-206ENST00000463411 KRTAP13-1Q8IUC0 172 aa13.11□□□□□ -0.31
PDLIM7-206ENST00000463411 LPAP08519 4548 aa13.11□□□□□ -0.31
PDLIM7-206ENST00000463411 A4D1N5 150 aa13.1□□□□□ -0.31
PDLIM7-206ENST00000463411 NCR3O14931 201 aa13.09□□□□□ -0.31
PDLIM7-206ENST00000463411 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PDLIM7-206ENST00000463411 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
PDLIM7-206ENST00000463411 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
PDLIM7-206ENST00000463411 TMEM238LA0A1B0GVL6 79 aa13.06□□□□□ -0.32
PDLIM7-206ENST00000463411 A6NJY4 79 aa13.06□□□□□ -0.32
PDLIM7-206ENST00000463411 PRLHP81277 87 aa13.06□□□□□ -0.32
PDLIM7-206ENST00000463411 IGLV6-57P01721 117 aa13.05□□□□□ -0.32
PDLIM7-206ENST00000463411 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
PDLIM7-206ENST00000463411 LINC00337Q8N6G1 96 aa13.05□□□□□ -0.32
PDLIM7-206ENST00000463411 ANAPC11Q9NYG5 84 aa13.05□□□□□ -0.32
PDLIM7-206ENST00000463411 DDTP30046 118 aa13.04□□□□□ -0.32
PDLIM7-206ENST00000463411 FXYD2P54710 66 aa13.04□□□□□ -0.32
PDLIM7-206ENST00000463411 TRAV13-2A0A0B4J235 113 aa13.03□□□□□ -0.32
PDLIM7-206ENST00000463411 TRBV10-3A0A0K0K1G6 114 aa13.03□□□□□ -0.32
PDLIM7-206ENST00000463411 CTAG1AP78358 180 aa13.03□□□□□ -0.32
PDLIM7-206ENST00000463411 CBY1Q9Y3M2 126 aa13.03□□□□□ -0.32
PDLIM7-206ENST00000463411 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
PDLIM7-206ENST00000463411 A0A0B4J2C4 111 aa13.01□□□□□ -0.33
PDLIM7-206ENST00000463411 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
PDLIM7-206ENST00000463411 M0R143 59 aa13□□□□□ -0.33
PDLIM7-206ENST00000463411 PRYO14603 147 aa13□□□□□ -0.33
PDLIM7-206ENST00000463411 KRTAP13-2Q52LG2 175 aa13□□□□□ -0.33
PDLIM7-206ENST00000463411 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
PDLIM7-206ENST00000463411 CFC1P0CG37 223 aa12.99□□□□□ -0.33
PDLIM7-206ENST00000463411 BVES-AS1Q5T3Y7 98 aa12.99□□□□□ -0.33
PDLIM7-206ENST00000463411 LINC00304Q8N9R0 145 aa12.98□□□□□ -0.33
PDLIM7-206ENST00000463411 OR13C6PQ8NH95 151 aa12.98□□□□□ -0.33
PDLIM7-206ENST00000463411 A0A1B0GWB2 263 aa12.97□□□□□ -0.33
PDLIM7-206ENST00000463411 A6NDN8 102 aa12.96□□□□□ -0.33
PDLIM7-206ENST00000463411 SPRR1AP35321 89 aa12.96□□□□□ -0.33
PDLIM7-206ENST00000463411 TRAV23DV6A0A075B6W5 121 aa12.95□□□□□ -0.34
PDLIM7-206ENST00000463411 HIGD2AQ9BW72 106 aa12.95□□□□□ -0.34
PDLIM7-206ENST00000463411 RAB37Q96AX2 223 aa12.94□□□□□ -0.34
PDLIM7-206ENST00000463411 HINT1P49773 126 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-206ENST00000463411 NHP2Q9NX24 153 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-206ENST00000463411 PRO1854Q9UHT4 67 aa12.92□□□□□ -0.34
PDLIM7-206ENST00000463411 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-206ENST00000463411 ZNF73O43830 326 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-206ENST00000463411 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-206ENST00000463411 SMIM11BQ8TCY0 68 aa12.88□□□□□ -0.35
PDLIM7-206ENST00000463411 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
PDLIM7-206ENST00000463411 RETNLBQ9BQ08 111 aa12.87□□□□□ -0.35
PDLIM7-206ENST00000463411 SPRR4Q96PI1 79 aa12.86□□□□□ -0.35
PDLIM7-206ENST00000463411 ETDCA0A1B0GVM5 59 aa12.85□□□□□ -0.35
PDLIM7-206ENST00000463411 C3orf22Q8N5N4 141 aa12.85□□□□□ -0.35
PDLIM7-206ENST00000463411 K7ERJ3 54 aa12.84□□□□□ -0.35
PDLIM7-206ENST00000463411 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
PDLIM7-206ENST00000463411 B5MCH6 92 aa12.83□□□□□ -0.36
PDLIM7-206ENST00000463411 A0A0U1RQV1 116 aa12.81□□□□□ -0.36
PDLIM7-206ENST00000463411 ELOF1P60002 83 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-206ENST00000463411 SPAG11AQ6PDA7 123 aa12.81□□□□□ -0.36
PDLIM7-206ENST00000463411 Q6ZRX8 168 aa12.81□□□□□ -0.36
PDLIM7-206ENST00000463411 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
PDLIM7-206ENST00000463411 H7C2G1 150 aa12.79□□□□□ -0.36
PDLIM7-206ENST00000463411 COX7BP24311 80 aa12.79□□□□□ -0.36
PDLIM7-206ENST00000463411 Q1RN00 199 aa12.79□□□□□ -0.36
PDLIM7-206ENST00000463411 VAMP3Q15836 100 aa12.78□□□□□ -0.36
PDLIM7-206ENST00000463411 BATFQ16520 125 aa12.78□□□□□ -0.36
PDLIM7-206ENST00000463411 C4orf48Q5BLP8 95 aa12.78□□□□□ -0.36
PDLIM7-206ENST00000463411 SNHG12Q9BXW3 62 aa12.78□□□□□ -0.36
PDLIM7-206ENST00000463411 IGLV7-46A0A075B6I9 117 aa12.77□□□□□ -0.37
PDLIM7-206ENST00000463411 TPRXLQ17RH7 258 aa12.77□□□□□ -0.37
PDLIM7-206ENST00000463411 SMCR5Q8TEV8 140 aa12.77□□□□□ -0.37
PDLIM7-206ENST00000463411 CDIP1Q9H305 208 aa12.76□□□□□ -0.37
PDLIM7-206ENST00000463411 Q9BRP9 147 aa12.74□□□□□ -0.37
PDLIM7-206ENST00000463411 DHRS4-AS1Q9P1J3 65 aa12.74□□□□□ -0.37
PDLIM7-206ENST00000463411 H0YGX0 51 aa12.73□□□□□ -0.37
PDLIM7-206ENST00000463411 TRIAP1O43715 76 aa12.72□□□□□ -0.37
PDLIM7-206ENST00000463411 Q8NBF4 154 aa12.72□□□□□ -0.37
PDLIM7-206ENST00000463411 MUC2Q02817 5179 aa12.71□□□□□ -0.38
PDLIM7-206ENST00000463411 COX6CP09669 75 aa12.7□□□□□ -0.38
PDLIM7-206ENST00000463411 PSMB2P49721 201 aa12.69□□□□□ -0.38
PDLIM7-206ENST00000463411 LINC00483Q53H64 154 aa12.69□□□□□ -0.38
PDLIM7-206ENST00000463411 GAGE2AQ6NT46 116 aa12.69□□□□□ -0.38
PDLIM7-206ENST00000463411 LINC00575Q6W349 94 aa12.69□□□□□ -0.38
PDLIM7-206ENST00000463411 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
PDLIM7-206ENST00000463411 TAX1BP3O14907 124 aa12.67□□□□□ -0.38
PDLIM7-206ENST00000463411 FP248Q71RG6 208 aaPredicted RBP12.67□□□□□ -0.38
PDLIM7-206ENST00000463411 A0A1B0GX51 115 aa12.66□□□□□ -0.38
PDLIM7-206ENST00000463411 SLC25A20O43772 301 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms