RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 FAT3Q8TDW7 4589 aa12.23□□□□□ -0.45
NUP43-205ENST00000463048 A6NDN8 102 aa12.23□□□□□ -0.45
NUP43-205ENST00000463048 KRTAP29-1A8MX34 341 aaPredicted RBP12.23□□□□□ -0.45
NUP43-205ENST00000463048 HIGD2AQ9BW72 106 aa12.23□□□□□ -0.45
NUP43-205ENST00000463048 A4D1N5 150 aa12.22□□□□□ -0.45
NUP43-205ENST00000463048 OXTP01178 125 aa12.22□□□□□ -0.45
NUP43-205ENST00000463048 SPRR1AP35321 89 aa12.22□□□□□ -0.45
NUP43-205ENST00000463048 C12orf57Q99622 126 aa12.22□□□□□ -0.45
NUP43-205ENST00000463048 PPDPFQ9H3Y8 114 aa12.21□□□□□ -0.45
NUP43-205ENST00000463048 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
NUP43-205ENST00000463048 KRTAP4-16G5E9R7 235 aaPredicted RBP12.19□□□□□ -0.46
NUP43-205ENST00000463048 ZNF73O43830 326 aaPredicted RBP12.19□□□□□ -0.46
NUP43-205ENST00000463048 LOC105371267A0A1B0GV96 52 aa12.18□□□□□ -0.46
NUP43-205ENST00000463048 B5MCH6 92 aa12.18□□□□□ -0.46
NUP43-205ENST00000463048 LINC01600Q96MT4 127 aa12.17□□□□□ -0.46
NUP43-205ENST00000463048 PRO1933Q9H354 126 aa12.16□□□□□ -0.46
NUP43-205ENST00000463048 ANAPC11Q9NYG5 84 aa12.16□□□□□ -0.46
NUP43-205ENST00000463048 TRAV13-2A0A0B4J235 113 aa12.15□□□□□ -0.46
NUP43-205ENST00000463048 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
NUP43-205ENST00000463048 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
NUP43-205ENST00000463048 KRTAP1-4P0C5Y4 121 aa12.14□□□□□ -0.47
NUP43-205ENST00000463048 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
NUP43-205ENST00000463048 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
NUP43-205ENST00000463048 SMIM6P0DI80 62 aa12.13□□□□□ -0.47
NUP43-205ENST00000463048 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
NUP43-205ENST00000463048 C6orf99Q4VX62 202 aa12.13□□□□□ -0.47
NUP43-205ENST00000463048 Q6ZRX8 168 aa12.13□□□□□ -0.47
NUP43-205ENST00000463048 MT1HL1P0DM35 61 aa12.12□□□□□ -0.47
NUP43-205ENST00000463048 Q9BRP9 147 aa12.12□□□□□ -0.47
NUP43-205ENST00000463048 RPL13AP40429 203 aaKnown RBP12.11□□□□□ -0.47
NUP43-205ENST00000463048 CEND1Q8N111 149 aa12.11□□□□□ -0.47
NUP43-205ENST00000463048 ERC2-IT1O76042 136 aa12.1□□□□□ -0.47
NUP43-205ENST00000463048 SMIM11BQ8TCY0 68 aa12.1□□□□□ -0.47
NUP43-205ENST00000463048 COX7BP24311 80 aa12.09□□□□□ -0.47
NUP43-205ENST00000463048 TAL2Q16559 108 aa12.09□□□□□ -0.47
NUP43-205ENST00000463048 DMBT1Q9UGM3 2413 aaPredicted RBP12.09□□□□□ -0.47
NUP43-205ENST00000463048 H7C2G1 150 aa12.08□□□□□ -0.48
NUP43-205ENST00000463048 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
NUP43-205ENST00000463048 CFC1P0CG37 223 aa12.07□□□□□ -0.48
NUP43-205ENST00000463048 FXYD2P54710 66 aa12.07□□□□□ -0.48
NUP43-205ENST00000463048 RAB37Q96AX2 223 aa12.07□□□□□ -0.48
NUP43-205ENST00000463048 KRTAP10-8P60410 259 aa12.06□□□□□ -0.48
NUP43-205ENST00000463048 HSD52Q0P140 79 aa12.06□□□□□ -0.48
NUP43-205ENST00000463048 A0A087X002 238 aa12.05□□□□□ -0.48
NUP43-205ENST00000463048 SPRR4Q96PI1 79 aa12.05□□□□□ -0.48
NUP43-205ENST00000463048 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
NUP43-205ENST00000463048 GAGE2AQ6NT46 116 aa12.03□□□□□ -0.48
NUP43-205ENST00000463048 ZNF706Q9Y5V0 76 aaPredicted RBP12.03□□□□□ -0.48
NUP43-205ENST00000463048 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.49
NUP43-205ENST00000463048 A6NJY4 79 aa12.02□□□□□ -0.49
NUP43-205ENST00000463048 CRYGAP11844 174 aa12.02□□□□□ -0.49
NUP43-205ENST00000463048 ST20-AS1Q8NBB2 130 aa12.02□□□□□ -0.49
NUP43-205ENST00000463048 TNXBP22105 4242 aa12.01□□□□□ -0.49
NUP43-205ENST00000463048 A0A0B4J2C4 111 aa12□□□□□ -0.49
NUP43-205ENST00000463048 A0A1B0GWB2 263 aa12□□□□□ -0.49
NUP43-205ENST00000463048 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
NUP43-205ENST00000463048 TRBV7-6A0A0J9YX20 115 aa11.99□□□□□ -0.49
NUP43-205ENST00000463048 NHP2Q9NX24 153 aaKnown RBP11.99□□□□□ -0.49
NUP43-205ENST00000463048 K7ERJ3 54 aa11.98□□□□□ -0.49
NUP43-205ENST00000463048 Q1RN00 199 aa11.98□□□□□ -0.49
NUP43-205ENST00000463048 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
NUP43-205ENST00000463048 VAMP3Q15836 100 aa11.97□□□□□ -0.49
NUP43-205ENST00000463048 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
NUP43-205ENST00000463048 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
NUP43-205ENST00000463048 TYMSOSQ8TAI1 123 aa11.97□□□□□ -0.49
NUP43-205ENST00000463048 PRO1854Q9UHT4 67 aa11.96□□□□□ -0.49
NUP43-205ENST00000463048 CTAG1AP78358 180 aa11.95□□□□□ -0.5
NUP43-205ENST00000463048 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
NUP43-205ENST00000463048 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
NUP43-205ENST00000463048 BVES-AS1Q5T3Y7 98 aa11.93□□□□□ -0.5
NUP43-205ENST00000463048 HERC1Q15751 4861 aa11.92□□□□□ -0.5
NUP43-205ENST00000463048 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
NUP43-205ENST00000463048 LINC00483Q53H64 154 aa11.91□□□□□ -0.5
NUP43-205ENST00000463048 SLC25A20O43772 301 aa11.9□□□□□ -0.5
NUP43-205ENST00000463048 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
NUP43-205ENST00000463048 hADV29S1A0JD25 119 aa11.86□□□□□ -0.51
NUP43-205ENST00000463048 TSPAN13O95857 204 aa11.86□□□□□ -0.51
NUP43-205ENST00000463048 MOBPQ13875 183 aa11.86□□□□□ -0.51
NUP43-205ENST00000463048 PSMB2P49721 201 aa11.85□□□□□ -0.51
NUP43-205ENST00000463048 M0R143 59 aa11.84□□□□□ -0.51
NUP43-205ENST00000463048 TRIAP1O43715 76 aa11.84□□□□□ -0.51
NUP43-205ENST00000463048 C9orf153Q5TBE3 101 aa11.84□□□□□ -0.51
NUP43-205ENST00000463048 BATFQ16520 125 aa11.82□□□□□ -0.52
NUP43-205ENST00000463048 Q6ZQY7 126 aa11.82□□□□□ -0.52
NUP43-205ENST00000463048 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
NUP43-205ENST00000463048 TEX49A0A1B0GTD5 131 aa11.81□□□□□ -0.52
NUP43-205ENST00000463048 SPRR1BP22528 89 aa11.81□□□□□ -0.52
NUP43-205ENST00000463048 LINC01547P58512 204 aaPredicted RBP11.81□□□□□ -0.52
NUP43-205ENST00000463048 Q8NBF4 154 aa11.81□□□□□ -0.52
NUP43-205ENST00000463048 FAM218AQ96MZ4 157 aa11.81□□□□□ -0.52
NUP43-205ENST00000463048 H0YGX0 51 aa11.8□□□□□ -0.52
NUP43-205ENST00000463048 CLEC2BQ92478 149 aa11.79□□□□□ -0.52
NUP43-205ENST00000463048 LAMTOR3Q9UHA4 124 aa11.79□□□□□ -0.52
NUP43-205ENST00000463048 IGLV5-48A0A075B6I7 105 aa11.78□□□□□ -0.52
NUP43-205ENST00000463048 Q8N377 158 aa11.77□□□□□ -0.53
NUP43-205ENST00000463048 SMIM29Q86T20 159 aa11.75□□□□□ -0.53
NUP43-205ENST00000463048 SNCGO76070 127 aa11.74□□□□□ -0.53
NUP43-205ENST00000463048 C4orf48Q5BLP8 95 aa11.74□□□□□ -0.53
NUP43-205ENST00000463048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.74□□□□□ -0.53
NUP43-205ENST00000463048 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms