RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 WFDC6Q9BQY6 131 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 KMT2DO14686 5537 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
SMC4-203ENST00000462668 TRBV7-3A0A075B6L6 115 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 C9orf62Q8N4C0 152 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 TRBV7-7A0A0K0K1E9 115 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 LENEPQ9Y5L5 61 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 MTORP42345 2549 aa0.95□□□□□ -2.26
SMC4-203ENST00000462668 TLN2Q9Y4G6 2542 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 HMGA1P17096 107 aaKnown RBP0.94□□□□□ -2.26
SMC4-203ENST00000462668 CAV3P56539 151 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 COX7B2Q8TF08 81 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 SPTA1P02549 2419 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 SPTAN1Q13813 2472 aaKnown RBP0.94□□□□□ -2.26
SMC4-203ENST00000462668 TFF1P04155 84 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 GNG2P59768 71 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 DNAL4O96015 105 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 IGLC1P0CG04 106 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 DPY30Q9C005 99 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 RTTNQ86VV8 2226 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.94□□□□□ -2.26
SMC4-203ENST00000462668 CCL18P55774 89 aa0.94□□□□□ -2.26
SMC4-203ENST00000462668 C20orf197Q8N268 126 aa0.93□□□□□ -2.26
SMC4-203ENST00000462668 FXYD6P3P58550 94 aa0.93□□□□□ -2.26
SMC4-203ENST00000462668 SPTBN2O15020 2390 aa0.93□□□□□ -2.26
SMC4-203ENST00000462668 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
SMC4-203ENST00000462668 CYP2G1PQ6ZSU1 146 aa0.93□□□□□ -2.26
SMC4-203ENST00000462668 MACF1Q9UPN3 7388 aaKnown RBP0.93□□□□□ -2.26
SMC4-203ENST00000462668 PRB4P10163 310 aaPredicted RBP0.92□□□□□ -2.26
SMC4-203ENST00000462668 RPL37P61927 97 aaKnown RBP0.92□□□□□ -2.26
SMC4-203ENST00000462668 TMEM14BQ9NUH8 114 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 BET1LQ9NYM9 111 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 TRAV22A0A0B4J277 110 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 PIGBOS1A0A0B4J2F0 54 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 S100A7L2Q5SY68 101 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 LELP1Q5T871 98 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 Q6ZQY7 126 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 URB1O60287 2271 aaKnown RBP0.92□□□□□ -2.26
SMC4-203ENST00000462668 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 S100A10P60903 97 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 Q8N6K4 173 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 NDUFA4L2Q9NRX3 87 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 RP1P56715 2156 aa0.92□□□□□ -2.26
SMC4-203ENST00000462668 PLAC4Q8WY50 150 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 LYNX1P0DP58 116 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 LINC00472Q9H8W2 130 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
SMC4-203ENST00000462668 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 MGST2Q99735 147 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 VMO1Q7Z5L0 202 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 SPTSSBQ8NFR3 76 aa0.91□□□□□ -2.26
SMC4-203ENST00000462668 H7BZZ5 65 aa0.9□□□□□ -2.26
SMC4-203ENST00000462668 EDDM3BP56851 147 aa0.9□□□□□ -2.26
SMC4-203ENST00000462668 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.26
SMC4-203ENST00000462668 FAM213BQ8TBF2 198 aa0.9□□□□□ -2.26
SMC4-203ENST00000462668 LINC01600Q96MT4 127 aa0.9□□□□□ -2.26
SMC4-203ENST00000462668 ACACAQ13085 2346 aa0.9□□□□□ -2.27
SMC4-203ENST00000462668 NPVFQ9HCQ7 196 aa0.9□□□□□ -2.27
SMC4-203ENST00000462668 NINQ8N4C6 2090 aa0.9□□□□□ -2.27
SMC4-203ENST00000462668 GVQW2A0A096LPI5 108 aaPredicted RBP0.9□□□□□ -2.27
SMC4-203ENST00000462668 hADV29S1A0JD25 119 aa0.9□□□□□ -2.27
SMC4-203ENST00000462668 SPRR4Q96PI1 79 aa0.89□□□□□ -2.27
SMC4-203ENST00000462668 PLAC8Q9NZF1 115 aa0.89□□□□□ -2.27
SMC4-203ENST00000462668 KNTC1P50748 2209 aa0.89□□□□□ -2.27
SMC4-203ENST00000462668 LINC00032P0C843 101 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 RPL7L1Q6DKI1 246 aaKnown RBP0.88□□□□□ -2.27
SMC4-203ENST00000462668 PPP1R1CQ8WVI7 109 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 BPESC1Q9GZL8 116 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 A6NIN4 97 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 AHCTF1Q8WYP5 2266 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 HMGN4O00479 90 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 TRGV9Q99603 122 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 UBA52P62987 128 aaKnown RBP0.88□□□□□ -2.27
SMC4-203ENST00000462668 SPINK13Q1W4C9 94 aa0.88□□□□□ -2.27
SMC4-203ENST00000462668 TRBV30A0A0K0K1B3 111 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 LINC01558Q9Y6Z2 57 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 DIDO1Q9BTC0 2240 aaKnown RBP0.87□□□□□ -2.27
SMC4-203ENST00000462668 NAP1L6A6NFF2 107 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 G3V318 75 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 SNRNP200O75643 2136 aaKnown RBP0.87□□□□□ -2.27
SMC4-203ENST00000462668 ANGP03950 147 aaKnown RBP0.87□□□□□ -2.27
SMC4-203ENST00000462668 ASIPP42127 132 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 ZNF137PP52743 207 aa0.87□□□□□ -2.27
SMC4-203ENST00000462668 USF3Q68DE3 2245 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 TMEM14DPA8MWL7 114 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 DYNLRB1Q9NP97 96 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 SCP2D1Q9UJQ7 156 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 V9GYV3 84 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 SFT2D2O95562 160 aa0.86□□□□□ -2.27
SMC4-203ENST00000462668 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 NDUFC1O43677 76 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 PYY3Q5JQD4 70 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 V9GYS6 101 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 LOC285095A0A1B0GVY8 99 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 FAM74A4Q5TZK3 123 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 ESPL1Q14674 2120 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms