RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 TRAV10A0A0B4J240 114 aa11.05□□□□□ -0.64
ACTB-207ENST00000462494 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
ACTB-207ENST00000462494 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
ACTB-207ENST00000462494 SCXQ7RTU7 201 aa11.04□□□□□ -0.64
ACTB-207ENST00000462494 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
ACTB-207ENST00000462494 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
ACTB-207ENST00000462494 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
ACTB-207ENST00000462494 CXCL6P80162 114 aa11.01□□□□□ -0.65
ACTB-207ENST00000462494 TLX1NBP0CAT3 122 aa10.99□□□□□ -0.65
ACTB-207ENST00000462494 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
ACTB-207ENST00000462494 TMEM258P61165 79 aa10.96□□□□□ -0.66
ACTB-207ENST00000462494 C20orf197Q8N268 126 aa10.96□□□□□ -0.66
ACTB-207ENST00000462494 Q8N377 158 aa10.96□□□□□ -0.66
ACTB-207ENST00000462494 TM2D3Q9BRN9 247 aa10.95□□□□□ -0.66
ACTB-207ENST00000462494 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
ACTB-207ENST00000462494 COL6A5A8TX70 2615 aa10.95□□□□□ -0.66
ACTB-207ENST00000462494 RMI2Q96E14 147 aa10.94□□□□□ -0.66
ACTB-207ENST00000462494 PLA2G2DQ9UNK4 145 aa10.94□□□□□ -0.66
ACTB-207ENST00000462494 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
ACTB-207ENST00000462494 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
ACTB-207ENST00000462494 FAM19A5Q7Z5A7 132 aaPredicted RBP10.94□□□□□ -0.66
ACTB-207ENST00000462494 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 C3orf84H3BNL1 204 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 Q6ZRX8 168 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 HUWE1Q7Z6Z7 4374 aaKnown RBP10.93□□□□□ -0.66
ACTB-207ENST00000462494 BAHCC1Q9P281 2608 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 J3KT08 172 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 K7EIL1 84 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 Q9BRP9 147 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 DHRS4-AS1Q9P1J3 65 aa10.93□□□□□ -0.66
ACTB-207ENST00000462494 TRAV7A0A075B6U4 112 aa10.92□□□□□ -0.66
ACTB-207ENST00000462494 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
ACTB-207ENST00000462494 PRYO14603 147 aa10.91□□□□□ -0.66
ACTB-207ENST00000462494 NREPQ16612 68 aa10.91□□□□□ -0.66
ACTB-207ENST00000462494 Q8N9L7 120 aa10.9□□□□□ -0.66
ACTB-207ENST00000462494 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
ACTB-207ENST00000462494 BCE1O60756 84 aa10.9□□□□□ -0.66
ACTB-207ENST00000462494 IGLV5-37A0A075B6J1 123 aa10.89□□□□□ -0.67
ACTB-207ENST00000462494 MRPL55Q7Z7F7 128 aaKnown RBP10.89□□□□□ -0.67
ACTB-207ENST00000462494 ST20-AS1Q8NBB2 130 aa10.89□□□□□ -0.67
ACTB-207ENST00000462494 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
ACTB-207ENST00000462494 LYSTQ99698 3801 aa10.87□□□□□ -0.67
ACTB-207ENST00000462494 IGLV5-48A0A075B6I7 105 aa10.87□□□□□ -0.67
ACTB-207ENST00000462494 SPRR1AP35321 89 aa10.87□□□□□ -0.67
ACTB-207ENST00000462494 UBE2BP63146 152 aa10.85□□□□□ -0.67
ACTB-207ENST00000462494 BPY2O14599 106 aa10.84□□□□□ -0.67
ACTB-207ENST00000462494 ERC2-IT1O76042 136 aa10.84□□□□□ -0.67
ACTB-207ENST00000462494 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
ACTB-207ENST00000462494 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
ACTB-207ENST00000462494 SNURFQ9Y675 71 aa10.84□□□□□ -0.67
ACTB-207ENST00000462494 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.676e-7■■■□□ 15.9
ACTB-207ENST00000462494 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
ACTB-207ENST00000462494 IGKV4-1P06312 121 aa10.82□□□□□ -0.68
ACTB-207ENST00000462494 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
ACTB-207ENST00000462494 DNAH10Q8IVF4 4471 aa10.81□□□□□ -0.68
ACTB-207ENST00000462494 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
ACTB-207ENST00000462494 A0A1W2PNM2 257 aa10.81□□□□□ -0.68
ACTB-207ENST00000462494 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
ACTB-207ENST00000462494 PSCAO43653 123 aa10.8□□□□□ -0.68
ACTB-207ENST00000462494 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
ACTB-207ENST00000462494 H7BZZ5 65 aa10.78□□□□□ -0.68
ACTB-207ENST00000462494 TNP2Q05952 138 aa10.78□□□□□ -0.68
ACTB-207ENST00000462494 A0A096LNI7 61 aa10.78□□□□□ -0.68
ACTB-207ENST00000462494 KLKP1Q107X0 134 aa10.78□□□□□ -0.68
ACTB-207ENST00000462494 OXTP01178 125 aa10.77□□□□□ -0.68
ACTB-207ENST00000462494 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
ACTB-207ENST00000462494 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
ACTB-207ENST00000462494 UBE2DNLQ8IWF7 75 aa10.77□□□□□ -0.69
ACTB-207ENST00000462494 Q8NBF4 154 aa10.76□□□□□ -0.69
ACTB-207ENST00000462494 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.75□□□□□ -0.69
ACTB-207ENST00000462494 COL7A1Q02388 2944 aa10.74□□□□□ -0.69
ACTB-207ENST00000462494 STAB2Q8WWQ8 2551 aa10.74□□□□□ -0.69
ACTB-207ENST00000462494 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
ACTB-207ENST00000462494 C16orf90A8MZG2 172 aa10.74□□□□□ -0.69
ACTB-207ENST00000462494 PRLHP81277 87 aa10.74□□□□□ -0.69
ACTB-207ENST00000462494 F8WEM9 126 aa10.73□□□□□ -0.69
ACTB-207ENST00000462494 DNAH9Q9NYC9 4486 aa10.73□□□□□ -0.69
ACTB-207ENST00000462494 A0A1B0GW54 56 aa10.73□□□□□ -0.69
ACTB-207ENST00000462494 A0A0G2JQZ4 141 aa10.71□□□□□ -0.69
ACTB-207ENST00000462494 CNBPP62633 177 aaKnown RBP10.71□□□□□ -0.69
ACTB-207ENST00000462494 SMIM29Q86T20 159 aa10.71□□□□□ -0.69
ACTB-207ENST00000462494 LINC00476Q8WZB0 136 aa10.7□□□□□ -0.7
ACTB-207ENST00000462494 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
ACTB-207ENST00000462494 TMEM254Q8TBM7 123 aa10.7□□□□□ -0.7
ACTB-207ENST00000462494 HIGD2AQ9BW72 106 aa10.7□□□□□ -0.7
ACTB-207ENST00000462494 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
ACTB-207ENST00000462494 APLNQ9ULZ1 77 aa10.68□□□□□ -0.7
ACTB-207ENST00000462494 CHTF8P0CG12 524 aa10.68□□□□□ -0.7
ACTB-207ENST00000462494 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
ACTB-207ENST00000462494 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
ACTB-207ENST00000462494 NDUFC1O43677 76 aa10.65□□□□□ -0.71
ACTB-207ENST00000462494 IGFL1Q6UW32 110 aa10.65□□□□□ -0.71
ACTB-207ENST00000462494 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.71
ACTB-207ENST00000462494 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.71
ACTB-207ENST00000462494 TENM2Q9NT68 2774 aa10.64□□□□□ -0.71
ACTB-207ENST00000462494 DSCR10P59022 87 aa10.64□□□□□ -0.71
ACTB-207ENST00000462494 C14orf177Q52M58 125 aa10.63□□□□□ -0.71
ACTB-207ENST00000462494 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
ACTB-207ENST00000462494 K7EQZ3 153 aa10.62□□□□□ -0.71
ACTB-207ENST00000462494 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms