RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 ANKRD39Q53RE8 183 aa13.95□□□□□ -0.18
SMKR1-201ENST00000462322 PPDPFQ9H3Y8 114 aa13.95□□□□□ -0.18
SMKR1-201ENST00000462322 LPAP08519 4548 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 AKR1D1P51857 326 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 Q6ZRX8 168 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
SMKR1-201ENST00000462322 ZNF73O43830 326 aaPredicted RBP13.92□□□□□ -0.18
SMKR1-201ENST00000462322 S100A2P29034 98 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 Q9BRP9 147 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 CBY1Q9Y3M2 126 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 ERC2-IT1O76042 136 aa13.91□□□□□ -0.18
SMKR1-201ENST00000462322 RNF213Q63HN8 5207 aa13.91□□□□□ -0.18
SMKR1-201ENST00000462322 JOSD1Q15040 202 aaPredicted RBP13.9□□□□□ -0.18
SMKR1-201ENST00000462322 GAGE2AQ6NT46 116 aa13.9□□□□□ -0.18
SMKR1-201ENST00000462322 HIST1H2BLQ99880 126 aa13.89□□□□□ -0.19
SMKR1-201ENST00000462322 LINC00483Q53H64 154 aa13.88□□□□□ -0.19
SMKR1-201ENST00000462322 S100A6P06703 90 aa13.87□□□□□ -0.19
SMKR1-201ENST00000462322 HINT1P49773 126 aaPredicted RBP13.87□□□□□ -0.19
SMKR1-201ENST00000462322 SPANXDQ9BXN6 97 aa13.87□□□□□ -0.19
SMKR1-201ENST00000462322 PCP2Q8IVA1 136 aa13.86□□□□□ -0.19
SMKR1-201ENST00000462322 LINC00518Q8N0U6 118 aa13.86□□□□□ -0.19
SMKR1-201ENST00000462322 SNRPEP62304 92 aaKnown RBP13.85□□□□□ -0.19
SMKR1-201ENST00000462322 CTAG1AP78358 180 aa13.85□□□□□ -0.19
SMKR1-201ENST00000462322 RETNLBQ9BQ08 111 aa13.85□□□□□ -0.19
SMKR1-201ENST00000462322 SPAG11AQ6PDA7 123 aa13.84□□□□□ -0.19
SMKR1-201ENST00000462322 COPS9Q8WXC6 57 aa13.84□□□□□ -0.19
SMKR1-201ENST00000462322 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
SMKR1-201ENST00000462322 Q8NBF4 154 aa13.83□□□□□ -0.2
SMKR1-201ENST00000462322 IFITM1P13164 125 aa13.81□□□□□ -0.2
SMKR1-201ENST00000462322 Q6ZVH6 145 aa13.8□□□□□ -0.2
SMKR1-201ENST00000462322 IGLV9-49A0A0B4J1Y8 123 aa13.79□□□□□ -0.2
SMKR1-201ENST00000462322 HSBP1L1C9JCN9 74 aa13.78□□□□□ -0.2
SMKR1-201ENST00000462322 MOBPQ13875 183 aa13.77□□□□□ -0.21
SMKR1-201ENST00000462322 MUSTN1Q8IVN3 82 aa13.77□□□□□ -0.21
SMKR1-201ENST00000462322 ST20-AS1Q8NBB2 130 aa13.76□□□□□ -0.21
SMKR1-201ENST00000462322 C6orf99Q4VX62 202 aa13.75□□□□□ -0.21
SMKR1-201ENST00000462322 COX7BP24311 80 aa13.74□□□□□ -0.21
SMKR1-201ENST00000462322 DHRS4-AS1Q9P1J3 65 aa13.74□□□□□ -0.21
SMKR1-201ENST00000462322 C5orf52A6NGY3 159 aa13.73□□□□□ -0.21
SMKR1-201ENST00000462322 SSBP3-AS1Q7Z2R9 100 aa13.73□□□□□ -0.21
SMKR1-201ENST00000462322 A6NDN8 102 aa13.72□□□□□ -0.21
SMKR1-201ENST00000462322 IGLV7-46A0A075B6I9 117 aa13.71□□□□□ -0.21
SMKR1-201ENST00000462322 SPINK1P00995 79 aa13.71□□□□□ -0.21
SMKR1-201ENST00000462322 ELOF1P60002 83 aaKnown RBP13.71□□□□□ -0.21
SMKR1-201ENST00000462322 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
SMKR1-201ENST00000462322 C9orf153Q5TBE3 101 aa13.69□□□□□ -0.22
SMKR1-201ENST00000462322 TRBV7-6A0A0J9YX20 115 aa13.66□□□□□ -0.22
SMKR1-201ENST00000462322 TRAV13-2A0A0B4J235 113 aa13.65□□□□□ -0.22
SMKR1-201ENST00000462322 SPRR1BP22528 89 aa13.64□□□□□ -0.23
SMKR1-201ENST00000462322 TPRXLQ17RH7 258 aa13.63□□□□□ -0.23
SMKR1-201ENST00000462322 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
SMKR1-201ENST00000462322 A0A1B0GWB2 263 aa13.62□□□□□ -0.23
SMKR1-201ENST00000462322 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
SMKR1-201ENST00000462322 CDIP1Q9H305 208 aa13.61□□□□□ -0.23
SMKR1-201ENST00000462322 TAL2Q16559 108 aa13.6□□□□□ -0.23
SMKR1-201ENST00000462322 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
SMKR1-201ENST00000462322 DEFB105AQ8NG35 78 aa13.59□□□□□ -0.23
SMKR1-201ENST00000462322 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
SMKR1-201ENST00000462322 SMIM11BQ8TCY0 68 aa13.58□□□□□ -0.24
SMKR1-201ENST00000462322 A4D1N5 150 aa13.56□□□□□ -0.24
SMKR1-201ENST00000462322 COX8AP10176 69 aa13.55□□□□□ -0.24
SMKR1-201ENST00000462322 Q8N377 158 aa13.55□□□□□ -0.24
SMKR1-201ENST00000462322 TEX49A0A1B0GTD5 131 aa13.54□□□□□ -0.24
SMKR1-201ENST00000462322 SLC25A20O43772 301 aa13.53□□□□□ -0.24
SMKR1-201ENST00000462322 Q1RN00 199 aa13.53□□□□□ -0.24
SMKR1-201ENST00000462322 HIST1H4GQ99525 98 aa13.52□□□□□ -0.25
SMKR1-201ENST00000462322 NHP2Q9NX24 153 aaKnown RBP13.51□□□□□ -0.25
SMKR1-201ENST00000462322 VAMP3Q15836 100 aa13.5□□□□□ -0.25
SMKR1-201ENST00000462322 DLEU1O43261 78 aa13.49□□□□□ -0.25
SMKR1-201ENST00000462322 HRCT1Q6UXD1 115 aa13.48□□□□□ -0.25
SMKR1-201ENST00000462322 MUC2Q02817 5179 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 IGLV5-48A0A075B6I7 105 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
SMKR1-201ENST00000462322 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 C12orf57Q99622 126 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 PAM16Q9Y3D7 125 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 KRTAP13-3Q3SY46 172 aa13.46□□□□□ -0.25
SMKR1-201ENST00000462322 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
SMKR1-201ENST00000462322 SMIM29Q86T20 159 aa13.45□□□□□ -0.26
SMKR1-201ENST00000462322 VAMP8Q9BV40 100 aa13.44□□□□□ -0.26
SMKR1-201ENST00000462322 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
SMKR1-201ENST00000462322 LINC00575Q6W349 94 aa13.42□□□□□ -0.26
SMKR1-201ENST00000462322 LIMD2Q9BT23 127 aa13.42□□□□□ -0.26
SMKR1-201ENST00000462322 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
SMKR1-201ENST00000462322 hADV29S1A0JD25 119 aa13.38□□□□□ -0.27
SMKR1-201ENST00000462322 CD164Q04900 197 aa13.38□□□□□ -0.27
SMKR1-201ENST00000462322 H7C2G1 150 aa13.37□□□□□ -0.27
SMKR1-201ENST00000462322 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
SMKR1-201ENST00000462322 Q6ZQY7 126 aa13.35□□□□□ -0.27
SMKR1-201ENST00000462322 A0A0U1RQV1 116 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 RAB37Q96AX2 223 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 CFC1P0CG37 223 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 A0A0G2JQZ4 141 aa13.32□□□□□ -0.28
SMKR1-201ENST00000462322 F8WEM9 126 aa13.32□□□□□ -0.28
SMKR1-201ENST00000462322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms