RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 PRYO14603 147 aa6.85□□□□□ -1.31
C9orf78-202ENST00000461349 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
C9orf78-202ENST00000461349 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
C9orf78-202ENST00000461349 TRAV12-1A0A0B4J245 112 aa6.84□□□□□ -1.31
C9orf78-202ENST00000461349 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
C9orf78-202ENST00000461349 C3orf79P0CE67 100 aa6.84□□□□□ -1.31
C9orf78-202ENST00000461349 AKR1D1P51857 326 aa6.84□□□□□ -1.31
C9orf78-202ENST00000461349 CFC1P0CG37 223 aa6.83□□□□□ -1.32
C9orf78-202ENST00000461349 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
C9orf78-202ENST00000461349 DPM2O94777 84 aa6.82□□□□□ -1.32
C9orf78-202ENST00000461349 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
C9orf78-202ENST00000461349 ZNF625Q96I27 306 aaPredicted RBP6.82□□□□□ -1.32
C9orf78-202ENST00000461349 PLNP26678 52 aa6.81□□□□□ -1.32
C9orf78-202ENST00000461349 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
C9orf78-202ENST00000461349 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
C9orf78-202ENST00000461349 KRTAP4-16G5E9R7 235 aaPredicted RBP6.8□□□□□ -1.32
C9orf78-202ENST00000461349 IGKCP01834 107 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 IGLC3P0DOY3 106 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 SPRR1AP35321 89 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 S100A12P80511 92 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
C9orf78-202ENST00000461349 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
C9orf78-202ENST00000461349 IGLV6-57P01721 117 aa6.79□□□□□ -1.32
C9orf78-202ENST00000461349 HERVK_113P61574 105 aa6.79□□□□□ -1.32
C9orf78-202ENST00000461349 SFTA2Q6UW10 78 aa6.79□□□□□ -1.32
C9orf78-202ENST00000461349 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
C9orf78-202ENST00000461349 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
C9orf78-202ENST00000461349 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
C9orf78-202ENST00000461349 LINC00158P58513 81 aa6.78□□□□□ -1.32
C9orf78-202ENST00000461349 NCR3O14931 201 aa6.76□□□□□ -1.33
C9orf78-202ENST00000461349 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
C9orf78-202ENST00000461349 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
C9orf78-202ENST00000461349 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
C9orf78-202ENST00000461349 JOSD1Q15040 202 aaPredicted RBP6.75□□□□□ -1.33
C9orf78-202ENST00000461349 B5MCH6 92 aa6.74□□□□□ -1.33
C9orf78-202ENST00000461349 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
C9orf78-202ENST00000461349 Q6Q795 121 aa6.74□□□□□ -1.33
C9orf78-202ENST00000461349 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
C9orf78-202ENST00000461349 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
C9orf78-202ENST00000461349 A0A0U1RRA0 63 aa6.73□□□□□ -1.33
C9orf78-202ENST00000461349 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
C9orf78-202ENST00000461349 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
C9orf78-202ENST00000461349 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
C9orf78-202ENST00000461349 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
C9orf78-202ENST00000461349 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
C9orf78-202ENST00000461349 VAMP8Q9BV40 100 aa6.72□□□□□ -1.33
C9orf78-202ENST00000461349 LEPROTO15243 131 aa6.71□□□□□ -1.34
C9orf78-202ENST00000461349 NMUP48645 174 aa6.71□□□□□ -1.34
C9orf78-202ENST00000461349 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
C9orf78-202ENST00000461349 Q9BRP9 147 aa6.71□□□□□ -1.34
C9orf78-202ENST00000461349 Q6ZRX8 168 aa6.7□□□□□ -1.34
C9orf78-202ENST00000461349 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
C9orf78-202ENST00000461349 E9PLD3 99 aa6.69□□□□□ -1.34
C9orf78-202ENST00000461349 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
C9orf78-202ENST00000461349 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
C9orf78-202ENST00000461349 J3QQQ9 107 aa6.68□□□□□ -1.34
C9orf78-202ENST00000461349 SMIM6P0DI80 62 aa6.68□□□□□ -1.34
C9orf78-202ENST00000461349 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
C9orf78-202ENST00000461349 ANKRD39Q53RE8 183 aa6.67□□□□□ -1.34
C9orf78-202ENST00000461349 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
C9orf78-202ENST00000461349 DDTP30046 118 aa6.66□□□□□ -1.34
C9orf78-202ENST00000461349 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
C9orf78-202ENST00000461349 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
C9orf78-202ENST00000461349 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
C9orf78-202ENST00000461349 LINC00587B1AMM8 73 aa6.64□□□□□ -1.35
C9orf78-202ENST00000461349 HERV-K104P63124 156 aa6.64□□□□□ -1.35
C9orf78-202ENST00000461349 SLC25A34Q6PIV7 304 aa6.64□□□□□ -1.35
C9orf78-202ENST00000461349 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
C9orf78-202ENST00000461349 C12orf57Q99622 126 aa6.64□□□□□ -1.35
C9orf78-202ENST00000461349 TSPEAR-AS2P59090 65 aa6.63□□□□□ -1.35
C9orf78-202ENST00000461349 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
C9orf78-202ENST00000461349 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
C9orf78-202ENST00000461349 LINC00846Q9NV44 126 aa6.63□□□□□ -1.35
C9orf78-202ENST00000461349 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
C9orf78-202ENST00000461349 COX8AP10176 69 aa6.61□□□□□ -1.35
C9orf78-202ENST00000461349 CD164Q04900 197 aa6.61□□□□□ -1.35
C9orf78-202ENST00000461349 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
C9orf78-202ENST00000461349 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
C9orf78-202ENST00000461349 S100A7L2Q5SY68 101 aa6.6□□□□□ -1.35
C9orf78-202ENST00000461349 LAMTOR3Q9UHA4 124 aa6.6□□□□□ -1.35
C9orf78-202ENST00000461349 A0A0J9YXY3 114 aa6.59□□□□□ -1.35
C9orf78-202ENST00000461349 TSTD3H0UI37 97 aa6.59□□□□□ -1.35
C9orf78-202ENST00000461349 H7C2G1 150 aa6.59□□□□□ -1.35
C9orf78-202ENST00000461349 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
C9orf78-202ENST00000461349 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
C9orf78-202ENST00000461349 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
C9orf78-202ENST00000461349 LCE2BO14633 110 aa6.58□□□□□ -1.36
C9orf78-202ENST00000461349 DLEU1O43261 78 aa6.58□□□□□ -1.36
C9orf78-202ENST00000461349 C1orf195Q5TG92 126 aa6.58□□□□□ -1.36
C9orf78-202ENST00000461349 UQCR10Q9UDW1 63 aa6.58□□□□□ -1.36
C9orf78-202ENST00000461349 SPRR1BP22528 89 aa6.57□□□□□ -1.36
C9orf78-202ENST00000461349 ATP11AUNQ6ZP68 121 aa6.57□□□□□ -1.36
C9orf78-202ENST00000461349 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
C9orf78-202ENST00000461349 MIEN1Q9BRT3 115 aa6.57□□□□□ -1.36
C9orf78-202ENST00000461349 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
C9orf78-202ENST00000461349 ZNF73O43830 326 aaPredicted RBP6.56□□□□□ -1.36
C9orf78-202ENST00000461349 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
C9orf78-202ENST00000461349 Q5XG85 94 aa6.56□□□□□ -1.36
C9orf78-202ENST00000461349 TIMM17BO60830 172 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms