RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 LITAFQ99732 161 aa8.84□□□□□ -0.99
ATG4B-213ENST00000460211 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
ATG4B-213ENST00000460211 IGLV6-57P01721 117 aa8.83□□□□□ -1
ATG4B-213ENST00000460211 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
ATG4B-213ENST00000460211 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
ATG4B-213ENST00000460211 EIF4EBP3O60516 100 aaPredicted RBP8.82□□□□□ -1
ATG4B-213ENST00000460211 HINT1P49773 126 aaPredicted RBP8.81□□□□□ -1
ATG4B-213ENST00000460211 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
ATG4B-213ENST00000460211 OR13C6PQ8NH95 151 aa8.81□□□□□ -1
ATG4B-213ENST00000460211 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
ATG4B-213ENST00000460211 B5MCH6 92 aa8.8□□□□□ -1
ATG4B-213ENST00000460211 JOSD1Q15040 202 aaPredicted RBP8.8□□□□□ -1
ATG4B-213ENST00000460211 Q6ZVH6 145 aa8.8□□□□□ -1
ATG4B-213ENST00000460211 SPRR4Q96PI1 79 aa8.8□□□□□ -1
ATG4B-213ENST00000460211 SPANXDQ9BXN6 97 aa8.8□□□□□ -1
ATG4B-213ENST00000460211 IFITM1P13164 125 aa8.79□□□□□ -1
ATG4B-213ENST00000460211 ZNF73O43830 326 aaPredicted RBP8.78□□□□□ -1
ATG4B-213ENST00000460211 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
ATG4B-213ENST00000460211 Q6ZRX8 168 aa8.78□□□□□ -1
ATG4B-213ENST00000460211 PCP2Q8IVA1 136 aa8.78□□□□□ -1
ATG4B-213ENST00000460211 TSPAN13O95857 204 aa8.77□□□□□ -1.01
ATG4B-213ENST00000460211 SCGB1D1O95968 90 aa8.76□□□□□ -1.01
ATG4B-213ENST00000460211 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
ATG4B-213ENST00000460211 C5orf52A6NGY3 159 aa8.75□□□□□ -1.01
ATG4B-213ENST00000460211 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
ATG4B-213ENST00000460211 CTAG1AP78358 180 aa8.73□□□□□ -1.01
ATG4B-213ENST00000460211 PRR4Q16378 134 aa8.73□□□□□ -1.01
ATG4B-213ENST00000460211 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
ATG4B-213ENST00000460211 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
ATG4B-213ENST00000460211 Q9BRP9 147 aa8.73□□□□□ -1.01
ATG4B-213ENST00000460211 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
ATG4B-213ENST00000460211 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
ATG4B-213ENST00000460211 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
ATG4B-213ENST00000460211 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
ATG4B-213ENST00000460211 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.02
ATG4B-213ENST00000460211 A6NDN8 102 aa8.7□□□□□ -1.02
ATG4B-213ENST00000460211 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
ATG4B-213ENST00000460211 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
ATG4B-213ENST00000460211 COX7BP24311 80 aa8.68□□□□□ -1.02
ATG4B-213ENST00000460211 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
ATG4B-213ENST00000460211 IGLV9-49A0A0B4J1Y8 123 aa8.65□□□□□ -1.02
ATG4B-213ENST00000460211 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
ATG4B-213ENST00000460211 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.02
ATG4B-213ENST00000460211 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
ATG4B-213ENST00000460211 Q8NBF4 154 aa8.65□□□□□ -1.02
ATG4B-213ENST00000460211 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
ATG4B-213ENST00000460211 MUC2Q02817 5179 aa8.65□□□□□ -1.03
ATG4B-213ENST00000460211 COX8AP10176 69 aa8.64□□□□□ -1.03
ATG4B-213ENST00000460211 SLC25A34Q6PIV7 304 aa8.64□□□□□ -1.03
ATG4B-213ENST00000460211 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
ATG4B-213ENST00000460211 MOBPQ13875 183 aa8.63□□□□□ -1.03
ATG4B-213ENST00000460211 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
ATG4B-213ENST00000460211 A4D1N5 150 aa8.62□□□□□ -1.03
ATG4B-213ENST00000460211 DLEU1O43261 78 aa8.62□□□□□ -1.03
ATG4B-213ENST00000460211 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
ATG4B-213ENST00000460211 SPINK1P00995 79 aa8.61□□□□□ -1.03
ATG4B-213ENST00000460211 TAL2Q16559 108 aa8.61□□□□□ -1.03
ATG4B-213ENST00000460211 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
ATG4B-213ENST00000460211 VAMP3Q15836 100 aa8.6□□□□□ -1.03
ATG4B-213ENST00000460211 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
ATG4B-213ENST00000460211 PAM16Q9Y3D7 125 aa8.6□□□□□ -1.03
ATG4B-213ENST00000460211 SPRR1BP22528 89 aa8.59□□□□□ -1.03
ATG4B-213ENST00000460211 SPATA45Q537H7 98 aa8.59□□□□□ -1.03
ATG4B-213ENST00000460211 SMIM11BQ8TCY0 68 aa8.59□□□□□ -1.03
ATG4B-213ENST00000460211 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
ATG4B-213ENST00000460211 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.03
ATG4B-213ENST00000460211 LAMTOR3Q9UHA4 124 aa8.59□□□□□ -1.03
ATG4B-213ENST00000460211 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
ATG4B-213ENST00000460211 SLC25A20O43772 301 aa8.57□□□□□ -1.04
ATG4B-213ENST00000460211 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
ATG4B-213ENST00000460211 TEX49A0A1B0GTD5 131 aa8.56□□□□□ -1.04
ATG4B-213ENST00000460211 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
ATG4B-213ENST00000460211 A0A0U1RQV1 116 aa8.55□□□□□ -1.04
ATG4B-213ENST00000460211 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
ATG4B-213ENST00000460211 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
ATG4B-213ENST00000460211 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
ATG4B-213ENST00000460211 C12orf57Q99622 126 aa8.52□□□□□ -1.05
ATG4B-213ENST00000460211 TMA7Q9Y2S6 64 aaKnown RBP8.52□□□□□ -1.05
ATG4B-213ENST00000460211 Q1RN00 199 aa8.51□□□□□ -1.05
ATG4B-213ENST00000460211 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
ATG4B-213ENST00000460211 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
ATG4B-213ENST00000460211 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
ATG4B-213ENST00000460211 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
ATG4B-213ENST00000460211 LINC00575Q6W349 94 aa8.49□□□□□ -1.05
ATG4B-213ENST00000460211 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
ATG4B-213ENST00000460211 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
ATG4B-213ENST00000460211 hADV29S1A0JD25 119 aa8.48□□□□□ -1.05
ATG4B-213ENST00000460211 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
ATG4B-213ENST00000460211 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 A6NJY4 79 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 CFC1P0CG37 223 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 Q8N377 158 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
ATG4B-213ENST00000460211 A0A0B4J2C4 111 aa8.46□□□□□ -1.06
ATG4B-213ENST00000460211 H7C2G1 150 aa8.46□□□□□ -1.06
ATG4B-213ENST00000460211 SNCGO76070 127 aa8.46□□□□□ -1.06
ATG4B-213ENST00000460211 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms