RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KRTAP1-1Q07627 177 aa9.8□□□□□ -0.84
PTPRU-205ENST00000460170 MOBPQ13875 183 aa9.8□□□□□ -0.84
PTPRU-205ENST00000460170 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
PTPRU-205ENST00000460170 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
PTPRU-205ENST00000460170 CDH23Q9H251 3354 aa9.78□□□□□ -0.84
PTPRU-205ENST00000460170 TRBV7-4A0A0J9YYF1 115 aa9.78□□□□□ -0.84
PTPRU-205ENST00000460170 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
PTPRU-205ENST00000460170 VPS13AQ96RL7 3174 aa9.78□□□□□ -0.84
PTPRU-205ENST00000460170 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
PTPRU-205ENST00000460170 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
PTPRU-205ENST00000460170 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
PTPRU-205ENST00000460170 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
PTPRU-205ENST00000460170 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
PTPRU-205ENST00000460170 RTL8CO15255 209 aa9.73□□□□□ -0.85
PTPRU-205ENST00000460170 K7EIL1 84 aa9.72□□□□□ -0.85
PTPRU-205ENST00000460170 AKAP13Q12802 2813 aa9.71□□□□□ -0.86
PTPRU-205ENST00000460170 H3BPC8 53 aa9.71□□□□□ -0.86
PTPRU-205ENST00000460170 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.86
PTPRU-205ENST00000460170 MAST4O15021 2626 aa9.7□□□□□ -0.86
PTPRU-205ENST00000460170 Q8N377 158 aa9.7□□□□□ -0.86
PTPRU-205ENST00000460170 LINC01600Q96MT4 127 aa9.69□□□□□ -0.86
PTPRU-205ENST00000460170 K7EQZ3 153 aa9.69□□□□□ -0.86
PTPRU-205ENST00000460170 TRAV22A0A0B4J277 110 aa9.69□□□□□ -0.86
PTPRU-205ENST00000460170 TLX1NBP0CAT3 122 aa9.69□□□□□ -0.86
PTPRU-205ENST00000460170 ERC2-IT1O76042 136 aa9.68□□□□□ -0.86
PTPRU-205ENST00000460170 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
PTPRU-205ENST00000460170 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
PTPRU-205ENST00000460170 MAP1AP78559 2803 aaPredicted RBP9.66□□□□□ -0.86
PTPRU-205ENST00000460170 IGFL1Q6UW32 110 aa9.65□□□□□ -0.87
PTPRU-205ENST00000460170 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.87
PTPRU-205ENST00000460170 A8MWP4 228 aa9.64□□□□□ -0.87
PTPRU-205ENST00000460170 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
PTPRU-205ENST00000460170 SPINK1P00995 79 aa9.64□□□□□ -0.87
PTPRU-205ENST00000460170 IGKV2-30P06310 120 aa9.64□□□□□ -0.87
PTPRU-205ENST00000460170 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
PTPRU-205ENST00000460170 KLKP1Q107X0 134 aa9.63□□□□□ -0.87
PTPRU-205ENST00000460170 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
PTPRU-205ENST00000460170 FRYQ5TBA9 3013 aa9.61□□□□□ -0.87
PTPRU-205ENST00000460170 CASC10Q5T4H9 136 aa9.59□□□□□ -0.87
PTPRU-205ENST00000460170 LAMA1P25391 3075 aa9.59□□□□□ -0.87
PTPRU-205ENST00000460170 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
PTPRU-205ENST00000460170 ACYP2P14621 99 aa9.58□□□□□ -0.88
PTPRU-205ENST00000460170 SZT2Q5T011 3432 aa9.57□□□□□ -0.88
PTPRU-205ENST00000460170 LINC00313P59037 77 aa9.56□□□□□ -0.88
PTPRU-205ENST00000460170 PRR15Q8IV56 129 aa9.56□□□□□ -0.88
PTPRU-205ENST00000460170 CR1P17927 2039 aa9.56□□□□□ -0.88
PTPRU-205ENST00000460170 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
PTPRU-205ENST00000460170 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
PTPRU-205ENST00000460170 SPAG11AQ6PDA7 123 aa9.55□□□□□ -0.88
PTPRU-205ENST00000460170 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
PTPRU-205ENST00000460170 H7BZZ5 65 aa9.54□□□□□ -0.88
PTPRU-205ENST00000460170 VCANP13611 3396 aa9.53□□□□□ -0.88
PTPRU-205ENST00000460170 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
PTPRU-205ENST00000460170 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
PTPRU-205ENST00000460170 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
PTPRU-205ENST00000460170 CNBPP62633 177 aaKnown RBP9.52□□□□□ -0.89
PTPRU-205ENST00000460170 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
PTPRU-205ENST00000460170 IGLV5-48A0A075B6I7 105 aa9.51□□□□□ -0.89
PTPRU-205ENST00000460170 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
PTPRU-205ENST00000460170 A0A1B0GU69 56 aa9.51□□□□□ -0.89
PTPRU-205ENST00000460170 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
PTPRU-205ENST00000460170 A0A087WTM6 91 aa9.5□□□□□ -0.89
PTPRU-205ENST00000460170 ZNF861PO60384 105 aa9.5□□□□□ -0.89
PTPRU-205ENST00000460170 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
PTPRU-205ENST00000460170 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
PTPRU-205ENST00000460170 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
PTPRU-205ENST00000460170 WIPF1O43516 503 aa9.48□□□□□ -0.89
PTPRU-205ENST00000460170 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
PTPRU-205ENST00000460170 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
PTPRU-205ENST00000460170 IGSF10Q6WRI0 2623 aa9.48□□□□□ -0.89
PTPRU-205ENST00000460170 DNAH14Q0VDD8 3507 aa9.47□□□□□ -0.89
PTPRU-205ENST00000460170 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
PTPRU-205ENST00000460170 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
PTPRU-205ENST00000460170 NBEAQ8NFP9 2946 aa9.46□□□□□ -0.9
PTPRU-205ENST00000460170 TEP1Q99973 2627 aaKnown RBP9.45□□□□□ -0.9
PTPRU-205ENST00000460170 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
PTPRU-205ENST00000460170 ATP11AUNQ6ZP68 121 aa9.44□□□□□ -0.9
PTPRU-205ENST00000460170 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
PTPRU-205ENST00000460170 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
PTPRU-205ENST00000460170 A8MUN3 132 aa9.43□□□□□ -0.9
PTPRU-205ENST00000460170 COA5Q86WW8 74 aa9.43□□□□□ -0.9
PTPRU-205ENST00000460170 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
PTPRU-205ENST00000460170 Q8NDZ9 215 aa9.42□□□□□ -0.9
PTPRU-205ENST00000460170 UNC79Q9P2D8 2635 aa9.42□□□□□ -0.9
PTPRU-205ENST00000460170 Q96NJ1 140 aa9.41□□□□□ -0.9
PTPRU-205ENST00000460170 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
PTPRU-205ENST00000460170 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
PTPRU-205ENST00000460170 ANAPC11Q9NYG5 84 aa9.4□□□□□ -0.9
PTPRU-205ENST00000460170 DSCR10P59022 87 aa9.37□□□□□ -0.91
PTPRU-205ENST00000460170 IGLV8-61A0A075B6I0 122 aa9.36□□□□□ -0.91
PTPRU-205ENST00000460170 IGLV7-43P04211 117 aa9.36□□□□□ -0.91
PTPRU-205ENST00000460170 OCR1Q9BZK8 76 aa9.36□□□□□ -0.91
PTPRU-205ENST00000460170 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
PTPRU-205ENST00000460170 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
PTPRU-205ENST00000460170 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
PTPRU-205ENST00000460170 STAB1Q9NY15 2570 aa9.35□□□□□ -0.91
PTPRU-205ENST00000460170 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
PTPRU-205ENST00000460170 SETXQ7Z333 2677 aaKnown RBP9.34□□□□□ -0.91
PTPRU-205ENST00000460170 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
PTPRU-205ENST00000460170 ADGRG4Q8IZF6 3080 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms