RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
SRM-202ENST00000459997 TRBV10-2A0A0K0K1G8 114 aa12.04□□□□□ -0.48
SRM-202ENST00000459997 NDUFC2O95298 119 aa12.04□□□□□ -0.48
SRM-202ENST00000459997 DDTP30046 118 aa12.04□□□□□ -0.48
SRM-202ENST00000459997 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
SRM-202ENST00000459997 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
SRM-202ENST00000459997 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
SRM-202ENST00000459997 B5MCH6 92 aa12.01□□□□□ -0.49
SRM-202ENST00000459997 SPAG11AQ6PDA7 123 aa12.01□□□□□ -0.49
SRM-202ENST00000459997 PCP2Q8IVA1 136 aa12.01□□□□□ -0.49
SRM-202ENST00000459997 IGLV6-57P01721 117 aa11.99□□□□□ -0.49
SRM-202ENST00000459997 AKR1D1P51857 326 aa11.99□□□□□ -0.49
SRM-202ENST00000459997 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
SRM-202ENST00000459997 MUC2Q02817 5179 aa11.98□□□□□ -0.49
SRM-202ENST00000459997 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
SRM-202ENST00000459997 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
SRM-202ENST00000459997 SCGB1D4Q6XE38 83 aa11.98□□□□□ -0.49
SRM-202ENST00000459997 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
SRM-202ENST00000459997 LINC00483Q53H64 154 aa11.97□□□□□ -0.49
SRM-202ENST00000459997 Q8NBF4 154 aa11.97□□□□□ -0.49
SRM-202ENST00000459997 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
SRM-202ENST00000459997 TPRXLQ17RH7 258 aa11.96□□□□□ -0.49
SRM-202ENST00000459997 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
SRM-202ENST00000459997 Q6ZRX8 168 aa11.96□□□□□ -0.49
SRM-202ENST00000459997 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
SRM-202ENST00000459997 Q9BRP9 147 aa11.95□□□□□ -0.5
SRM-202ENST00000459997 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
SRM-202ENST00000459997 CDIP1Q9H305 208 aa11.95□□□□□ -0.5
SRM-202ENST00000459997 TRAV23DV6A0A075B6W5 121 aa11.93□□□□□ -0.5
SRM-202ENST00000459997 OR13C6PQ8NH95 151 aa11.91□□□□□ -0.5
SRM-202ENST00000459997 IGLV9-49A0A0B4J1Y8 123 aa11.9□□□□□ -0.5
SRM-202ENST00000459997 SCGB1D1O95968 90 aa11.9□□□□□ -0.5
SRM-202ENST00000459997 HSBP1L1C9JCN9 74 aa11.89□□□□□ -0.51
SRM-202ENST00000459997 ZNF73O43830 326 aaPredicted RBP11.89□□□□□ -0.51
SRM-202ENST00000459997 MOBPQ13875 183 aa11.89□□□□□ -0.51
SRM-202ENST00000459997 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
SRM-202ENST00000459997 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
SRM-202ENST00000459997 SPINK1P00995 79 aa11.88□□□□□ -0.51
SRM-202ENST00000459997 FP248Q71RG6 208 aaPredicted RBP11.87□□□□□ -0.51
SRM-202ENST00000459997 MUSTN1Q8IVN3 82 aa11.87□□□□□ -0.51
SRM-202ENST00000459997 IFITM1P13164 125 aa11.86□□□□□ -0.51
SRM-202ENST00000459997 CBY1Q9Y3M2 126 aa11.85□□□□□ -0.51
SRM-202ENST00000459997 Q6ZVH6 145 aa11.84□□□□□ -0.51
SRM-202ENST00000459997 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
SRM-202ENST00000459997 LINC00518Q8N0U6 118 aa11.84□□□□□ -0.51
SRM-202ENST00000459997 HINT1P49773 126 aaPredicted RBP11.82□□□□□ -0.52
SRM-202ENST00000459997 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
SRM-202ENST00000459997 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
SRM-202ENST00000459997 ST20-AS1Q8NBB2 130 aa11.8□□□□□ -0.52
SRM-202ENST00000459997 RPS29P62273 56 aaKnown RBP11.78□□□□□ -0.52
SRM-202ENST00000459997 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
SRM-202ENST00000459997 A6NDN8 102 aa11.77□□□□□ -0.53
SRM-202ENST00000459997 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.53
SRM-202ENST00000459997 Q8N377 158 aa11.77□□□□□ -0.53
SRM-202ENST00000459997 MUC17Q685J3 4493 aa11.76□□□□□ -0.53
SRM-202ENST00000459997 COX8AP10176 69 aa11.75□□□□□ -0.53
SRM-202ENST00000459997 COX7BP24311 80 aa11.74□□□□□ -0.53
SRM-202ENST00000459997 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
SRM-202ENST00000459997 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
SRM-202ENST00000459997 SLC25A20O43772 301 aa11.73□□□□□ -0.53
SRM-202ENST00000459997 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
SRM-202ENST00000459997 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
SRM-202ENST00000459997 A4D1N5 150 aa11.71□□□□□ -0.53
SRM-202ENST00000459997 SPATA45Q537H7 98 aa11.71□□□□□ -0.53
SRM-202ENST00000459997 TMA7Q9Y2S6 64 aaKnown RBP11.71□□□□□ -0.53
SRM-202ENST00000459997 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
SRM-202ENST00000459997 DLEU1O43261 78 aa11.69□□□□□ -0.54
SRM-202ENST00000459997 SPRR1BP22528 89 aa11.69□□□□□ -0.54
SRM-202ENST00000459997 SLC25A34Q6PIV7 304 aa11.69□□□□□ -0.54
SRM-202ENST00000459997 SMIM11BQ8TCY0 68 aa11.69□□□□□ -0.54
SRM-202ENST00000459997 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
SRM-202ENST00000459997 VAMP8Q9BV40 100 aa11.68□□□□□ -0.54
SRM-202ENST00000459997 TRBV7-6A0A0J9YX20 115 aa11.67□□□□□ -0.54
SRM-202ENST00000459997 A0A1B0GWB2 263 aa11.65□□□□□ -0.54
SRM-202ENST00000459997 C12orf57Q99622 126 aa11.65□□□□□ -0.54
SRM-202ENST00000459997 LAMTOR3Q9UHA4 124 aa11.65□□□□□ -0.54
SRM-202ENST00000459997 FAT4Q6V0I7 4981 aa11.65□□□□□ -0.55
SRM-202ENST00000459997 ASB16-AS1Q495Z4 193 aa11.64□□□□□ -0.55
SRM-202ENST00000459997 LCE2AQ5TA79 106 aaPredicted RBP11.64□□□□□ -0.55
SRM-202ENST00000459997 PYY3Q5JQD4 70 aa11.63□□□□□ -0.55
SRM-202ENST00000459997 TAL2Q16559 108 aa11.62□□□□□ -0.55
SRM-202ENST00000459997 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
SRM-202ENST00000459997 C2orf91Q6ZV80 131 aa11.62□□□□□ -0.55
SRM-202ENST00000459997 DEFB105AQ8NG35 78 aa11.62□□□□□ -0.55
SRM-202ENST00000459997 Q1RN00 199 aa11.6□□□□□ -0.55
SRM-202ENST00000459997 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
SRM-202ENST00000459997 HIGD1BQ9P298 99 aa11.6□□□□□ -0.55
SRM-202ENST00000459997 SEC61BP60468 96 aaKnown RBP11.59□□□□□ -0.55
SRM-202ENST00000459997 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
SRM-202ENST00000459997 LINC01547P58512 204 aaPredicted RBP11.56□□□□□ -0.56
SRM-202ENST00000459997 CFC1BP0CG36 223 aa11.54□□□□□ -0.56
SRM-202ENST00000459997 CFC1P0CG37 223 aa11.54□□□□□ -0.56
SRM-202ENST00000459997 XP32Q5T750 250 aa11.54□□□□□ -0.56
SRM-202ENST00000459997 PRO1933Q9H354 126 aa11.54□□□□□ -0.56
SRM-202ENST00000459997 VAMP3Q15836 100 aa11.53□□□□□ -0.56
SRM-202ENST00000459997 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
SRM-202ENST00000459997 IGLV5-48A0A075B6I7 105 aa11.52□□□□□ -0.57
SRM-202ENST00000459997 LINC00575Q6W349 94 aa11.52□□□□□ -0.57
SRM-202ENST00000459997 KRTAP4-1Q9BYQ7 146 aa11.52□□□□□ -0.57
SRM-202ENST00000459997 H7C2G1 150 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms